Astyanax mexicanus (Mexican tetra): 103033060
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Entry
103033060 CDS
T05042
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03440
Homologous recombination
amex03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103033060 (top3a)
03460 Fanconi anemia pathway
103033060 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amex03032
]
103033060 (top3a)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103033060 (top3a)
Enzymes [BR:
amex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
103033060 (top3a)
DNA replication proteins [BR:
amex03032
]
Eukaryotic type
DNA Topoisomerases
103033060 (top3a)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
103033060 (top3a)
FA (Fanconi anemia) pathway
103033060 (top3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
103033060
NCBI-ProteinID:
XP_007247892
Ensembl:
ENSAMXG00000010181
UniProt:
A0A8B9L2B0
LinkDB
All DBs
Position
3:complement(54184452..54196142)
Genome browser
AA seq
1016 aa
AA seq
DB search
MNIITAALYRVTAQSRFCRLISSSMIRRTQIKKVLCVAEKNDAAKGIAEIMSSGRARRRE
GLSVYNKIYEYEYNLFGQNVTVNMTSVSGHLLALEFKAHFQKWHSCNPVLLFDAEVEKYC
PENYVQIKRTLEKEARQCQALIIWTDCDREGENIGFEVINVCKAVKANIQVFRARFSEIT
PNSIRRACETLTEPDINVSDAVDVRQELDLRIGAAFTRFQTLRLQKIFPDSLANQLISYG
SCQFPTLGFVVERFKAIQAFIPETFFKIKVVHEPSEDECVEFSWKRNRLFNHTACLVLYQ
MCMEEPLATVLSVTSKPKSKWRPLPLDTVELEKLASRKLKISAKETMKIAEKLYTQGFIS
YPRTETNMFPTNLNLVPLVEQQTQDSNWGPFAQGILESGGPTPRNGNKSDQAHPPIHPTK
YTNSLQGNEKRLYEFIVRHFLACCSKDAQGQEVIVDIDIAEEKFSASGLTIIARNYLDVY
PYEKWFNKVIPLYTANTTFQPSAIEMVEGQTSPPQLLTEADLIALMEKHGIGTDATHAEH
IETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPDLRAELEADLKLVSEGRKD
KASVLRHHVAKYKAVFIESARKAKKLDEALSNYLGQAQEYTEQEEQELEMPLPVRKCPQC
NRDMVLRKRKDSTGKFLSCLGYPACKAAVWFPDTVLEVSRDDSVCPTCRPHPVHMLKFKF
KRGSLPPGMDLEFVGCIGGCDETLREVLNLKYLRGGGSGGDSGIQVIQRTASRQPNAPRN
NNTALQSRSENRPPPPRPSADSSRPPLTNPAQSRPMQLPSSDQSNAVVCNCGVDALLLTV
RKEGPNQGRQFYKCNTGNCKFFLWADESAEQHGSAGSRGPAGQSFQPSRPSVGFGNGPQE
RHGSRGAAGDTGGEAMCNCNEPAVQRTVMKDGPNKGRAFHTCGKPRDQQCGFFQWADENV
PPAAVRSTTGGGDNSTWNGSKKTGVSSSKAPAAKRPRTCGICHQPGHTRTTCPQGR
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgaacattattactgcagctctgtaccgagtcacagctcagagtcgcttctgcaggctt
atatccagcagtatgatcaggagaacacagattaagaaggttctgtgtgtggctgaaaag
aatgatgcagctaaaggcattgcagagatcatgtccagtgggagagccaggaggagagaa
gggctgtcggtctacaataaaatatacgagtatgaatataatctttttggacagaatgta
actgttaatatgacatctgtgtctggacatcttctcgcacttgaattcaaagcccatttt
cagaaatggcacagctgtaatccagtcttgctgtttgatgcagaagtggaaaagtactgc
cctgagaactatgtgcaaattaagaggaccttggagaaagaggctagacagtgccaggct
ctgatcatctggactgactgtgatcgagaaggagaaaacataggctttgaggtcattaat
gtctgcaaggctgtgaaggcaaacatccaagtgttccgtgctcggttttctgagattact
ccaaactccatcagaagagcctgtgagacgctgactgagcctgatattaatgtcagtgat
gcagtggatgttagacaggagcttgatctgcgaattggagcagcatttacaaggtttcag
actttacggctacagaagatctttccagactctcttgcgaatcagctgattagctatgga
agctgccagtttcctacccttggttttgtggtggagagatttaaagcaattcaagccttc
atccctgagaccttttttaaaattaaagtggttcatgagcctagtgaggacgagtgcgtg
gagttcagctggaaaagaaatcgtctgtttaaccacacagcttgtcttgtgctctaccag
atgtgcatggaggaacccctggcaacagtgctttctgtaacaagtaaacctaaaagcaaa
tggaggccattacctcttgacactgtggaacttgagaagctagcctcaaggaaattgaag
ataagcgccaaagagacaatgaagatagctgaaaaactctacactcaagggtttatcagt
tatcctcgtactgagaccaacatgtttcccacgaacctgaacttggttccgctggttgag
caacagactcaagacagcaactgggggccatttgcacaaggcattttggagagcggtggg
cccacacctcgaaatggaaacaaatcggaccaggcccatcctcccattcaccccaccaaa
tacactaatagtctacagggaaacgagaagcgtctgtacgagtttattgtccgtcacttc
ttggcctgttgctctaaagatgcacagggccaggaggtgatcgtggacatcgacatcgct
gaggagaagttctctgccagtgggctcacgatcatcgccaggaactatttggatgtttac
ccatatgaaaagtggttcaacaaggttattccattatatacggccaacacaacgttccag
ccttcagccattgagatggtggaaggacagaccagcccacctcaacttctgacggaagct
gacttgatcgctctaatggagaagcatggcattggcactgatgccacacacgcagagcac
atcgaaactatcaagagccgcatgtatgtgggtctaacagcagatcagaggttcctccct
ggagagctcgggatgggcctggttgagggttataattctatgggctatgaaatgtctaaa
ccggacctgagggcagaactggaggctgacctgaagctcgtgtctgaagggcgaaaggac
aaggcatcggtcctcagacatcatgtagcaaaatacaaggctgtttttatagagtctgcc
aggaaggcaaaaaaattggatgaagcactgtccaattatttgggccaggcccaggagtat
accgagcaggaggaacaagaattagagatgcctcttccagtacggaagtgtccgcagtgc
aaccgggacatggttttaagaaagaggaaggacagcacagggaagtttctgtcgtgtctg
ggctacccagcctgtaaggcagcagtgtggtttccagatacagtgctggaggtcagcaga
gatgacagcgtctgtccaacgtgtcgcccacatcctgtccacatgctgaagttcaagttc
aagaggggaagtcttcctccagggatggatctcgagtttgtcggctgcatcggtggctgt
gatgagaccctaagagaggttttgaatctgaagtatctccgtggaggcggcagtggagga
gattctggcattcaagttattcaacgtacagcttcacgtcaaccaaatgcacctagaaac
aataatacagcacttcagtccaggtctgagaacagacctccacctcccagacccagcgca
gacagtagcagacccccactgaccaatcccgcacagtcaaggcccatgcagctgccgtct
tctgaccagagcaatgctgtggtgtgtaactgtggagtggacgcgcttctcctcacagtt
cggaaagagggtcccaaccaaggccgtcagttctacaagtgcaatacggggaactgtaag
ttcttcctgtgggcggatgagtcggctgagcagcacgggtcagcagggagcagaggacca
gctggtcaaagttttcaaccttcaagaccttctgttggatttggaaatgggcctcaggag
aggcatggcagcagaggagcagcaggagatacaggaggagaggcgatgtgtaactgtaac
gaacctgctgtccaaagaaccgtcatgaaagatgggccaaacaagggaagagcgttccat
acctgcgggaaaccacgggatcagcagtgtggcttctttcaatgggcggatgaaaacgtg
cctccagctgctgtaagaagcacaacaggtggaggagacaacagtacgtggaatggcagt
aagaagactggagtttcttcaagtaaagctcctgctgccaaaaggccgaggacttgtgga
atttgtcatcagccaggccacacacggaccacctgtccacagggccggtga
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