Astyanax mexicanus (Mexican tetra): 103033060
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Entry
103033060 CDS
T05042
Symbol
top3a
Name
(RefSeq) DNA topoisomerase 3-alpha
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03440
Homologous recombination
amex03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103033060 (top3a)
03460 Fanconi anemia pathway
103033060 (top3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amex03032
]
103033060 (top3a)
03400 DNA repair and recombination proteins [BR:
amex03400
]
103033060 (top3a)
Enzymes [BR:
amex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
103033060 (top3a)
DNA replication proteins [BR:
amex03032
]
Eukaryotic type
DNA Topoisomerases
103033060 (top3a)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
103033060 (top3a)
FA (Fanconi anemia) pathway
103033060 (top3a)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_GRF
Toprim
Zn_ribbon_Top1
Zn_ribbon_GRF_2
zf-C2H2_10
Motif
Other DBs
NCBI-GeneID:
103033060
NCBI-ProteinID:
XP_007247892
Ensembl:
ENSAMXG00000010181
UniProt:
A0A8B9L2B0
LinkDB
All DBs
Position
3:complement(54184452..54196142)
Genome browser
AA seq
1016 aa
AA seq
DB search
MNIITAALYRVTAQSRFCRLISSSMIRRTQIKKVLCVAEKNDAAKGIAEIMSSGRARRRE
GLSVYNKIYEYEYNLFGQNVTVNMTSVSGHLLALEFKAHFQKWHSCNPVLLFDAEVEKYC
PENYVQIKRTLEKEARQCQALIIWTDCDREGENIGFEVINVCKAVKANIQVFRARFSEIT
PNSIRRACETLTEPDINVSDAVDVRQELDLRIGAAFTRFQTLRLQKIFPDSLANQLISYG
SCQFPTLGFVVERFKAIQAFIPETFFKIKVVHEPSEDECVEFSWKRNRLFNHTACLVLYQ
MCMEEPLATVLSVTSKPKSKWRPLPLDTVELEKLASRKLKISAKETMKIAEKLYTQGFIS
YPRTETNMFPTNLNLVPLVEQQTQDSNWGPFAQGILESGGPTPRNGNKSDQAHPPIHPTK
YTNSLQGNEKRLYEFIVRHFLACCSKDAQGQEVIVDIDIAEEKFSASGLTIIARNYLDVY
PYEKWFNKVIPLYTANTTFQPSAIEMVEGQTSPPQLLTEADLIALMEKHGIGTDATHAEH
IETIKSRMYVGLTADQRFLPGELGMGLVEGYNSMGYEMSKPDLRAELEADLKLVSEGRKD
KASVLRHHVAKYKAVFIESARKAKKLDEALSNYLGQAQEYTEQEEQELEMPLPVRKCPQC
NRDMVLRKRKDSTGKFLSCLGYPACKAAVWFPDTVLEVSRDDSVCPTCRPHPVHMLKFKF
KRGSLPPGMDLEFVGCIGGCDETLREVLNLKYLRGGGSGGDSGIQVIQRTASRQPNAPRN
NNTALQSRSENRPPPPRPSADSSRPPLTNPAQSRPMQLPSSDQSNAVVCNCGVDALLLTV
RKEGPNQGRQFYKCNTGNCKFFLWADESAEQHGSAGSRGPAGQSFQPSRPSVGFGNGPQE
RHGSRGAAGDTGGEAMCNCNEPAVQRTVMKDGPNKGRAFHTCGKPRDQQCGFFQWADENV
PPAAVRSTTGGGDNSTWNGSKKTGVSSSKAPAAKRPRTCGICHQPGHTRTTCPQGR
NT seq
3051 nt
NT seq
+upstream
nt +downstream
nt
atgaacattattactgcagctctgtaccgagtcacagctcagagtcgcttctgcaggctt
atatccagcagtatgatcaggagaacacagattaagaaggttctgtgtgtggctgaaaag
aatgatgcagctaaaggcattgcagagatcatgtccagtgggagagccaggaggagagaa
gggctgtcggtctacaataaaatatacgagtatgaatataatctttttggacagaatgta
actgttaatatgacatctgtgtctggacatcttctcgcacttgaattcaaagcccatttt
cagaaatggcacagctgtaatccagtcttgctgtttgatgcagaagtggaaaagtactgc
cctgagaactatgtgcaaattaagaggaccttggagaaagaggctagacagtgccaggct
ctgatcatctggactgactgtgatcgagaaggagaaaacataggctttgaggtcattaat
gtctgcaaggctgtgaaggcaaacatccaagtgttccgtgctcggttttctgagattact
ccaaactccatcagaagagcctgtgagacgctgactgagcctgatattaatgtcagtgat
gcagtggatgttagacaggagcttgatctgcgaattggagcagcatttacaaggtttcag
actttacggctacagaagatctttccagactctcttgcgaatcagctgattagctatgga
agctgccagtttcctacccttggttttgtggtggagagatttaaagcaattcaagccttc
atccctgagaccttttttaaaattaaagtggttcatgagcctagtgaggacgagtgcgtg
gagttcagctggaaaagaaatcgtctgtttaaccacacagcttgtcttgtgctctaccag
atgtgcatggaggaacccctggcaacagtgctttctgtaacaagtaaacctaaaagcaaa
tggaggccattacctcttgacactgtggaacttgagaagctagcctcaaggaaattgaag
ataagcgccaaagagacaatgaagatagctgaaaaactctacactcaagggtttatcagt
tatcctcgtactgagaccaacatgtttcccacgaacctgaacttggttccgctggttgag
caacagactcaagacagcaactgggggccatttgcacaaggcattttggagagcggtggg
cccacacctcgaaatggaaacaaatcggaccaggcccatcctcccattcaccccaccaaa
tacactaatagtctacagggaaacgagaagcgtctgtacgagtttattgtccgtcacttc
ttggcctgttgctctaaagatgcacagggccaggaggtgatcgtggacatcgacatcgct
gaggagaagttctctgccagtgggctcacgatcatcgccaggaactatttggatgtttac
ccatatgaaaagtggttcaacaaggttattccattatatacggccaacacaacgttccag
ccttcagccattgagatggtggaaggacagaccagcccacctcaacttctgacggaagct
gacttgatcgctctaatggagaagcatggcattggcactgatgccacacacgcagagcac
atcgaaactatcaagagccgcatgtatgtgggtctaacagcagatcagaggttcctccct
ggagagctcgggatgggcctggttgagggttataattctatgggctatgaaatgtctaaa
ccggacctgagggcagaactggaggctgacctgaagctcgtgtctgaagggcgaaaggac
aaggcatcggtcctcagacatcatgtagcaaaatacaaggctgtttttatagagtctgcc
aggaaggcaaaaaaattggatgaagcactgtccaattatttgggccaggcccaggagtat
accgagcaggaggaacaagaattagagatgcctcttccagtacggaagtgtccgcagtgc
aaccgggacatggttttaagaaagaggaaggacagcacagggaagtttctgtcgtgtctg
ggctacccagcctgtaaggcagcagtgtggtttccagatacagtgctggaggtcagcaga
gatgacagcgtctgtccaacgtgtcgcccacatcctgtccacatgctgaagttcaagttc
aagaggggaagtcttcctccagggatggatctcgagtttgtcggctgcatcggtggctgt
gatgagaccctaagagaggttttgaatctgaagtatctccgtggaggcggcagtggagga
gattctggcattcaagttattcaacgtacagcttcacgtcaaccaaatgcacctagaaac
aataatacagcacttcagtccaggtctgagaacagacctccacctcccagacccagcgca
gacagtagcagacccccactgaccaatcccgcacagtcaaggcccatgcagctgccgtct
tctgaccagagcaatgctgtggtgtgtaactgtggagtggacgcgcttctcctcacagtt
cggaaagagggtcccaaccaaggccgtcagttctacaagtgcaatacggggaactgtaag
ttcttcctgtgggcggatgagtcggctgagcagcacgggtcagcagggagcagaggacca
gctggtcaaagttttcaaccttcaagaccttctgttggatttggaaatgggcctcaggag
aggcatggcagcagaggagcagcaggagatacaggaggagaggcgatgtgtaactgtaac
gaacctgctgtccaaagaaccgtcatgaaagatgggccaaacaagggaagagcgttccat
acctgcgggaaaccacgggatcagcagtgtggcttctttcaatgggcggatgaaaacgtg
cctccagctgctgtaagaagcacaacaggtggaggagacaacagtacgtggaatggcagt
aagaagactggagtttcttcaagtaaagctcctgctgccaaaaggccgaggacttgtgga
atttgtcatcagccaggccacacacggaccacctgtccacagggccggtga
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