Astyanax mexicanus (Mexican tetra): 103033078
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Entry
103033078 CDS
T05042
Name
(RefSeq) VPS10 domain-containing receptor SorCS1 isoform X1
KO
K27081
VPS10 domain-containing receptor SorCS1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103033078
Membrane trafficking [BR:
amex04131
]
Protein recycling
Others
Others
103033078
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sortilin-Vps10
Sortilin_C
PKD
PKD_4
GBP_PSP
Motif
Other DBs
NCBI-GeneID:
103033078
NCBI-ProteinID:
XP_049325535
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Position
21:23777651..24167005
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AA seq
1242 aa
AA seq
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MRRGGRSGQGWIGMFGTVMMVLMVVLMLPVRSEISCRSCQVAGGEWRPSDQRLVLLKLKT
GDARDSAVPLQATGSRGEVAQEDRLDGQTLAGEEHPQSGRGSEEEPVEVAAASRRKREVL
REVRRSSTDRLNVFDRQLGSSLSSSRGGKVHDGQIADARLKYRGRRSTGSGGGSSRERAE
LRWNKEERRTSSSRQEELKLTSSTFALTGDSAHNQAMVHWSGQNSSVILMLTKLYDFNLG
SVTESSLWRSTDYGTTYEKLNEKVGVKTILSYLYVSPNNKRKIMLLTDPEVENSLLISTD
EGATYQKYRLSFYVLSLLFHPEQEDWILAYSHDQKLYSSVEFGRRWQLVHERVAPNRFYW
SKTGLDKEPGLIHLETSISETQALYVTCKLQNCTEANKGKPFPGYIDPNSLVVQDEYVFV
QVSTGGRPIYYVSSRRDLFTPMKLPKYTLPKDLHVISTDENRVVAAVQEWNQNDTYNLYV
SESGGVFYTLALESVVSSMGPEGNVMIDLYEVAGIKGMFLANKKQDDQIKTFITYNKGRD
WRLLQAPSSDLHGNSIHCILPYCSLHLHLHVSANPYTSGNIASKESAPGIIVASGSIGAE
LTSSNVSMFITSDAGNTWRQIFDEEYSVLYLDQGGALVAIRHTPLPIRHLWLSFDEGRVW
NKYSFTSSPLFVDGVLGEPGEETLIMTIFGHVSHRSEWQLVKIDFRSIFNRRCTEADYQT
WHLHNQGEPCLMGVKRIYRKLKPIARCVMGKTYSVTMTSDPCDCTESDFECDYGYERRTD
GRCTPAFWFQPSSMSRSCTTGHTFLNSTGYRKVVSNNCTAGVVDLYTARRLPCPSQAPKG
LHLVTSEGKLTALLSHNVTFLVFLEQGDGSRTSITVDFGDGNAITYSNVSSIEDGIKHIY
KNVGIYRVSAMAENGLGSETAVLFLHVTCQLEYIHLSAPFVAVKNKEVNLTAVLWPSQVG
TVTYIWWFGNNSEPVITLEGSVAFTFPREGVNIVTVQVAAGNTILQDRKTIAIHEYFKSH
LLAFSSNLDDHNPDVAEWRLDVSRVIKNSMVQATDVSPDQLLVTVLPGLPTAAEFFLLPD
KEITEGKPEKTAAHLDQLLELVLGALNQNQVQFTLRPGVQITVYAAQLSAAPLVDTSENH
SSSAMLMLLSVVVVGLAVFLIYKFKRKIPGLHLYAAMQDEKEQEMIRSPVSPTESTPSCS
SQRELLTSPEPLDTEVNTQPIECIKPHPRVKFSTELPTYIDV
NT seq
3729 nt
NT seq
+upstream
nt +downstream
nt
atgcggagagggggacgctctggccagggttggatcgggatgttcggcacggtgatgatg
gtgctgatggtggtgctgatgctgccggtcaggagcgagataagttgccgatcgtgccag
gtggcgggaggcgagtggcggccgagcgatcagcggctggtgctgctgaagctgaagacg
ggggacgcccgggactctgctgtgccgctccaggcaacagggtcccggggcgaagttgcg
caggaggaccgactcgacggacagaccttggccggggaggagcatcctcagagcggcaga
gggagcgaggaggagccggtggaagtggcggcggcttcgcggagaaaacgagaagtactg
cgagaagtacggagaagctccacggaccgcttgaacgtttttgatcgccaactgggttcg
agtttgagttcgagtcgtggtgggaaagttcacgacggccagattgccgacgcgcgtctt
aagtatcgtggacgcaggagcaccggcagcggcggtggcagcagccgggaacgggctgag
ctcaggtggaataaggaggagaggaggacctccagctccaggcaagaggagctgaaactc
accagctccaccttcgccctgaccggagactccgcgcacaaccaagccatggtgcactgg
tccggacagaacagcagcgtaattctcatgctgaccaagctgtatgacttcaacctgggg
agtgtcactgagagctctttgtggaggtcaaccgactacggaaccacttacgagaagctt
aatgaaaaagtcggggtgaagaccatactcagttacttgtacgtcagcccaaataacaag
agaaagatcatgctgttgaccgacccagaggtggagaacagtctgctgatcagcacggat
gagggcgccacctatcagaaataccgcctcagcttctatgtcctcagcctccttttccat
ccggagcaggaggactggatactcgcctacagccacgaccagaagctctacagctcggtg
gagttcgggcgccggtggcagctggttcatgaaagggttgctcccaatcgattctattgg
tccaaaacaggtctggataaggagcctgggctgattcacctggagaccagcatctccgaa
acacaggctctctatgtcacctgcaaactgcagaactgcaccgaggccaacaagggcaaa
ccgttccccggctacatcgaccccaattccctggtggtacaggacgagtatgtgtttgtc
caggtgtcgacgggcggccggccaatctactacgtgtcatcgaggcgagacctgttcaca
cccatgaagctgcccaagtacacgcttccaaaggacctgcacgtaatcagcacggatgaa
aaccgggtggtggcagcagtccaggaatggaatcagaatgacacctataacctgtatgtg
tccgagtctggaggagtcttctacacactcgctctggagagcgttgtgagcagcatgggg
ccggagggaaacgtgatgatagacctgtatgaggtggcgggaatcaaaggcatgttcctg
gccaacaagaaacaggatgatcaaataaagaccttcatcacgtataataaaggccgggac
tggaggctgctgcaggcgccctcttctgacctgcatgggaacagcatccactgcatactg
ccgtactgctcgctgcatttgcacctacacgtgtcggcgaacccttacacgtccgggaac
atcgccagcaaggagtcggctcccggaatcatcgtggcgtctggttctataggcgctgag
ctgactagcagtaacgtgagcatgttcatcacgtccgacgctggaaacacttggcggcag
atatttgacgaggaatacagcgttctgtatctggaccaaggcggagcactggtggccatc
cggcacaccccgctccccatcagacacctatggttgagctttgacgaggggcgagtgtgg
aataaatacagtttcacgtcgtcgccgctgttcgtggacggagttctgggcgagccgggg
gaggaaacactgatcatgacaatcttcggtcacgtcagtcatcggtccgagtggcagctg
gtgaagatcgacttcaggtctatttttaacaggcggtgcactgaggcagactaccagacc
tggcacctccacaaccagggcgagccttgtctgatgggtgtgaagagaatctaccggaag
ctgaagcccatagccaggtgcgttatgggtaaaacctattcggttacgatgacttcggat
ccctgcgactgcaccgagtccgatttcgaatgtgattatggctatgaaagaagaacagac
ggaaggtgtactccggctttctggtttcagccctcttccatgtccagaagctgcactaca
ggccacacttttctcaacagcactgggtataggaaagtggtgtctaataactgcactgcc
ggagtggtggacctgtatacggcgcgccgactgccgtgccccagccaggccccgaaaggc
ctccacctggtcaccagcgagggcaagctcacagccctgctgagccacaatgtcaccttc
ctcgtttttctcgagcagggtgatggatcaaggacaagcatcacagtggacttcggtgac
ggtaatgctatcacttactccaacgtgagctccattgaagacgggatcaagcacatctac
aagaacgtaggaatctacagagtgtccgccatggcagagaacggcctggggtccgagaca
gcagttcttttcttacacgttacatgtcagctggagtatatccatctttctgctcctttt
gtggcggtgaaaaataaggaagtcaacttgacagcggttctgtggccgagccaagtggga
accgtcacctacatctggtggtttgggaacaactcggagccggtaatcacactggaggga
agtgtggcgttcacgttcccgcgggagggtgtaaacatcgtcaccgtgcaggtggcagct
gggaataccatcctgcaagacaggaaaaccatcgccatccacgaatatttcaagtctcat
cttttagccttttcctccaatctggacgaccataaccctgatgtggctgagtggaggctg
gacgtcagcagagtcatcaaaaactcaatggtccaagccactgacgtaagtccagatcag
ctattggtcacggtgttgccaggactgcccacagccgctgaattcttcttgttgccagat
aaagaaatcacagaaggcaaaccagagaaaacagcggcacatttagatcagctgttggag
ttagttctgggagcacttaaccagaaccaggtccagttcaccttaagaccaggggttcaa
atcacagtctacgctgcacagttatctgcagcacccctagtggacaccagtgagaaccac
agcagttcagccatgctaatgctcctgtcggtggtggtggtgggtttagctgtgttcctc
atctataaatttaaaaggaagatcccaggcctccacctctatgcggcgatgcaggacgaa
aaagagcaagaaatgatccggagtccagtgagcccgacggagagcacccccagctgcagc
tctcagcgagagcttctcacctcaccggagcctctggacaccgaggtcaacacacagccc
atcgaatgcattaagcctcacccgcgtgtcaaattctcgacggaacttcctacatacatc
gacgtctga
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integrated database retrieval system
