Astyanax mexicanus (Mexican tetra): 103033246
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Entry
103033246 CDS
T05042
Symbol
lrp4
Name
(RefSeq) low-density lipoprotein receptor-related protein 4 isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103033246 (lrp4)
Membrane trafficking [BR:
amex04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
103033246 (lrp4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
Vgb_lyase
cEGF
EGF_LRP2
DUF5050
EGF_CA
Motif
Other DBs
NCBI-GeneID:
103033246
NCBI-ProteinID:
XP_049321598
LinkDB
All DBs
Position
16:complement(8144715..8310954)
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AA seq
1919 aa
AA seq
DB search
MQPAALSTTLTLLLLLLQLLLCARGVLGSAECSCGRNHFTCAVSVFGECTCIPVQWQCDG
DNDCGDHSDEDGCMLPTCSPLDFHCDNGKCIRRSWVCDGDNDCEDDSDEHDCPPRECEED
EFHCQNGYCIRSLWHCDGDNDCGDNSDEQCDMRKCSDKEFRCSDGSCIAEHWYCDGDTDC
KDGTDEENCPSDLLTATCSVEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRS
AEFMCSSGMCINAGWRCDGEFDCDDQSDESNCTISMCMADQFRCASGRCVRLSWRCDGED
DCSDGSDEEGCEKTGAPPCASDQFLCGNRRCIGQRKVCNEVNDCGDGTDEHPHQDCRPRS
TEGNCNVGNGGCSQKCLMSRGLVQCSCHTGYKLSDDGKTCQDVDECANEGYCSQGCTNTE
GGFQCWCVQGYELRPDKRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIAL
DFHHSRELVFWSDVTLDRIMKANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGTS
RIEVANLDGTHRKVLIWQSMEKPRAIALHPIEGKIYWTDWGNTPRIEYSNMDGSGRRIIA
DTNLFWPNGLTIDYAGHRMYWVDAKHHVIERADLDGKNRKAVISQGLPHPFAITVFEDSL
YWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGGRNRCGTNNGGCSHL
CLPSSKAFTCACPTGFKKVDQYNCALSLDKFLLFARRTDIRRISFDTEDMSDDVVPLADV
RNAVALDWDSKDGHIYWTDVTTDSISRALWNGSKQEVVVDTSLESPAGLAVDWVTHKLYW
TDAGTDRIEVSNADGSMRTVLIWENLDRPRDIVVDPVGGFMYWTDWGANPKIERAGMDAS
SRVVIISSNLTWPNGLAIDYQTERLYWADAGMKTIEFGNFDGSNRQVLIGTQLPHPFGLT
LHEDKIYWTDWQSKSIQSADKMTGLGRSTLAENLENLMDIHMFHRHRTTVQSPCLVNNGG
CSHLCLLAPAPKGSSCACPTGINLQTDGKTCTPGMNSFLVFARRTDIRMVSLDIPYYADV
VLAVNGSMKNTIAIGVDPTEGKVYWSDSTLKKITRANINGTQQEDIISTGLMTTDGLAVD
SVGRKIYWTDTGTNRIEVANLNGSMRKVLIWRNLDSPRAIALYHEMGYMYWTDWGEHAKL
ERAGLDGSDRVVLISNNLGWPNGLAVDKAGSQLLWADAHTERIEASDLNGLNRRTLVSPV
QHPYGLTLLGPHIYWTDWQSRSIQRADKTSGANIITVRSNLPGLMDIQAVDRERPLGYNK
CGRRNAGCSHLCLPRPNGTSCACPTGILLKSDGSTCEEMPETYLLFSNRVSVRRISLDTA
DHTDVHVPVPELHNVISLDYDSVDGKLYYTDVSLDVIRRVNLDGSEMETVVSQGLKTTDG
LAVDWVARNMYWTDTGRNTIEVARLDGSARKVLVNNSLDEPRAIAVFPSKGFLFWTDWGH
IAKIERAHLDGSDRKVLINTDLGWPNGLTLDYDTRRIFWVDAHLDRIESSDLSGQLRQIL
VSPVSHPFALTQLKPLSSHLTAFSRISQQDRWIYWTDWQTKSVQRVDKYNGRNKETVLAN
VEGLMDIIVVSPNRQTGTNHCGVNNGGCTHLCFAKTNSFVCACPDEPDDRPCSTISGFVP
TVPDRGTTSTQSPNKREKAATNKPQPGLPVLNCTDKIGGAEGCLQNNVISAPHGEGLHIS
YVIGGALTVLAILILIAVYIIYRHKKSKFADPGVSNLTYSNPSYRTSTQEVKIETAQKPP
IYNQLRYKKEGVGEGSYTKEKIRIVEGVCLLSGEELYWEDLKQLKVCRGSGLHACMRTDT
VSLQASSASLDDTETEQLLQGDQSECSSINTAMATPQRHSAHPDTGWAPNRKPSTESEV
NT seq
5760 nt
NT seq
+upstream
nt +downstream
nt
atgcagcctgcagctctctccaccaccctaactctactgctcctcctgctacagctgctg
ctctgcgcgcgcggtgtgttgggcagtgcggagtgctcgtgtgggcggaaccacttcacc
tgtgcggtcagtgtgtttggagagtgcacctgcataccagtgcagtggcagtgtgatgga
gataatgactgcggggaccacagtgacgaggatggctgcatgttgccgacctgctccccc
ctggacttccactgtgataacgggaagtgtatccggcgctcgtgggtgtgtgatggagac
aacgactgtgaggatgactcggatgagcacgactgccctccacgtgagtgtgaggaggat
gagttccactgtcagaacgggtactgtatccgcagcctgtggcactgcgatggagacaac
gactgcggagacaacagtgatgaacagtgtgacatgaggaagtgttcggataaggagttc
cgctgttcagacggtagctgtatagccgagcactggtactgcgatggagacacagactgc
aaggacggaacagacgaggaaaactgcccctcagacctgctgacggccacctgcagtgtt
gaggagttccagtgtgcgtacggccgctgcattctggacatttaccactgcgacggagac
gacgactgtggagactggtctgatgaatcagactgctcttcacaccagccgtgtcgctcg
gctgagttcatgtgcagcagtgggatgtgcatcaatgcaggctggaggtgtgatggagag
tttgactgtgacgatcaatcagacgagagcaactgcacgatctcgatgtgtatggcggat
cagtttcgctgtgcgtcgggacggtgtgtgcggttgtcatggcgatgtgatggtgaggat
gactgctctgatggcagtgatgaagaaggctgtgaaaagacaggagctcctccttgtgcg
tctgatcagttcctgtgtggaaacagacgctgcatcggtcagcgcaaagtgtgtaatgaa
gtaaacgactgtggagacggaacagatgaacatccacaccaagactgccgtcccaggtcc
actgaagggaactgcaacgtgggtaacggcggctgctctcagaagtgtttgatgagccgc
ggtttagtgcagtgctcctgccacactggatacaaactctcagacgatggaaaaacctgc
caagatgtggacgagtgtgcgaatgagggatactgcagtcagggctgcaccaacactgag
ggggggttccagtgctggtgtgttcaaggctacgagctccggcccgataagcgcagctgt
aaagctctgggtccggagccggtgctgttgtttgcgaatcggattgatatccggcaggtg
ttgccgcaccgctctgagtacacccttctgctcaacaatctggagaacgccatcgcactc
gacttccaccacagcagagagctggtgttctggtcggacgtcactctggaccgaatcatg
aaggccaacctgaacggcagtaacgtggaggaggtggtgtctactggactggaaagccca
ggtggtctggccatcgactggatccatgataagctgtactggacggattcgggaacgtct
cggatcgaggtggctaatctggacgggacgcaccgtaaggttctgatatggcagagtatg
gagaaaccccgcgcaatcgctctgcaccccatcgaaggaaagatctactggacagactgg
ggcaacaccccccgtattgagtactccaacatggacggatccggtcgcagaatcatcgca
gacactaacttgttctggcccaacggactgaccatcgactacgctggacaccgcatgtac
tgggtggatgccaagcaccacgtcatcgagagggccgacctggacggaaagaaccggaaa
gccgtcatcagccagggtcttcctcatccgtttgccatcacagtgtttgaggatagtctg
tactggaccgactggcacaccaaaagcatcaacagcgccaacaaatttactgggaaaaac
caggagatcatccgcaacaagcttcacttccccatggacatacacacactgcaccctcag
agacagcctgcaggtggtcgtaatcgctgtgggacgaataatggcggctgtagtcacctg
tgcctccccagtagtaaagcgtttacctgtgcctgtcccacaggcttcaaaaaggtggac
cagtacaactgtgccctgagtcttgacaagttcctgctttttgcccgaaggacggacatc
cgtcggatcagcttcgacaccgaggacatgtcggatgacgtcgtccccctggcggacgtc
cgtaacgccgtggcgctggactgggactcaaaagacggtcatatttactggaccgacgtc
accaccgactccatcagccgcgctctgtggaacggatccaaacaggaggtggtggtggac
accagtctggagagccctgctggactggccgtcgactgggtcacacacaaactctactgg
actgatgctggtactgatcgcatcgaagtttccaatgctgacggcagcatgcgcacggtc
ctcatctgggagaacctggatcgcccccgggacattgtggtggaccctgttggaggattc
atgtactggacagactggggagcgaacccaaagatagagcgagccgggatggacgcctcc
agccgcgtggtcatcatctcatcaaacctgacctggcccaacggactcgccatcgactat
cagaccgagagactgtactgggccgacgccggcatgaagactattgagttcggcaacttt
gacggatccaacagacaggtgctgattggtacgcagttgcctcatccgtttggcctgacc
ctgcatgaagataagatctattggacagactggcagtccaagagcatccagagcgcggat
aaaatgaccggcttgggtcgctcaacgctggcggagaacctggagaacctgatggacatc
cacatgttccaccggcacagaaccacggttcagtccccctgtttagtgaataatggaggc
tgtagtcatctgtgtctactggctccagctcctaaaggctccagctgtgcctgtcccacc
ggcatcaacctgcagacggacggcaaaacctgcactccaggaatgaacagtttcctggtc
ttcgctcgaaggacggacatcaggatggtctctctggatatcccatattatgctgacgtg
gttctggctgttaacgggtccatgaagaacaccatcgccattggagtggatcccactgaa
ggtaaagtgtactggtcagacagcacgctgaagaagatcaccagggctaatatcaacggc
acccagcaggaggacatcatctctacaggtctgatgaccacggatggccttgctgtagac
tcagtgggcaggaagatctactggacggatactggaaccaaccgcatcgaggtggccaac
ctgaacggctccatgcggaaagttctgatctggcggaacctggacagccctcgcgcaatc
gccctgtaccacgagatggggtatatgtactggacagactggggtgagcatgccaaactg
gagcgagcgggactggacggatcggaccgcgtggttctgatcagtaataatctgggctgg
ccgaacggactggccgtagacaaggccggctcacagttgctctgggcagacgctcacact
gagcggatcgaggcgtctgatctaaacgggctgaaccgcaggacgctggtgtctccagtg
cagcatccgtacgggctcacgctgctaggcccgcatatctactggacggactggcagagc
cgcagcatccagagagcagacaaaacctccggcgccaacatcatcaccgtgcgctccaac
ctgcctggactcatggacatccaggctgtggaccgcgagagaccgctgggttataataag
tgtgggcggcgtaacgctggctgttctcacctgtgcctcccccggccgaacgggacgtcc
tgcgcctgccccaccgggatcctgctgaagagtgacggcagcacctgtgaggaaatgccc
gagacctacctgctgttctccaaccgcgtcagcgtccgccgcatctcactggatacggct
gaccacaccgacgtccacgtccccgtccccgagctgcacaacgtcatctccctcgactac
gacagcgtggacggaaaactctactacaccgacgtctcactggatgtcatcagacgggtt
aatctggatggcagtgagatggagacggtggtcagtcaggggctgaagaccacagatggg
ttagcagtggactgggtggcgaggaacatgtactggacggatacgggtcggaacactata
gaggtggctcggcttgacggctcggccaggaaggttctggtcaataacagcctggacgaa
ccacgagccatcgccgtgttccccagcaaagggttcctgttctggacagactgggggcac
attgccaaaattgaacgtgcccatctggacggttctgaccgaaaagttctgatcaacacg
gacctgggctggcccaacggcctgacactcgactatgatactcgcaggatattctgggtg
gatgcacatctggaccgcatagaaagttcagatctgagtggccaactgcgccaaatcctc
gtcagtcctgtttcacacccgttcgccctcacacagctgaagccgctctcctctcatcta
accgctttctcccgaatctcacagcaagaccgctggatctactggaccgactggcagact
aaatccgtccagcgcgtcgacaaatacaacggccgcaataaggagaccgttctggccaat
gtcgaggggctgatggacattatagtggtgtcaccaaaccggcagactggtaccaaccac
tgcggcgtgaataacggcggctgcactcatctctgcttcgctaagaccaacagcttcgtc
tgcgcctgtccagacgagccagacgacaggccgtgttcaaccatttccggttttgttccg
acggtgcccgaccgaggaaccaccagcacccagtctcccaacaaacgagagaaagctgcc
acgaacaaaccccagcctggtctccctgtgctcaactgtacggataagatcgggggagcg
gagggctgtctgcagaataacgtgatctcggctcctcacggggaggggcttcatatcagc
tacgtgattggtggagccctgactgtgctggccattcttatacttatagcagtgtacatt
atttacaggcacaagaagtcgaagtttgcagatccgggtgtgagtaatctgacctacagt
aacccctcctaccgcacctcaacacaggaggtgaagatagagacggctcagaaaccaccc
atttataatcagctacgatataaaaaagagggtgttggggaaggaagctacaccaaagaa
aagatccggattgtggagggcgtgtgtttgctatcaggggaggagctatactgggaggat
ctgaagcagctgaaggtgtgcagggggagtggcctccacgcatgcatgcgcacggacacc
gtttccctgcaggctagctccgcctccctcgacgacaccgagaccgaacagctgctgcag
ggcgaccaatcagaatgctccagcataaacacagccatggccacgccccagcgccacagc
gcacaccccgacacgggctgggctcccaaccgcaagccctccaccgagagcgaagtgtga
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