KEGG   Astyanax mexicanus (Mexican tetra): 103033271
Entry
103033271         CDS       T05042                                 
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
  KO
K12587  exosome complex component MTR3
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:amex00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103033271 (exosc6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amex03019]
    103033271 (exosc6)
Messenger RNA biogenesis [BR:amex03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     103033271 (exosc6)
SSDB
Motif
Pfam: RNase_PH
Other DBs
NCBI-GeneID: 103033271
NCBI-ProteinID: XP_007241958
UniProt: A0A8B9J4N8
LinkDB
Position
Unknown
AA seq 271 aa
MPVDTKRVRGPEESQCPLLFLPPAAQTAEPREPRAGRGNGEVRPVFARCGLVSQAKGSSY
LEAGNTKILCSVYGPREPERRDEAGVRSGRLLCDLRLAPFSCGKRGAWIQGSGERDLSLA
LSESLHPAVCLHRYPRAQIEVNVMVLENDGSVLAHAVTCASMALADAGIEMYDVVLGSAL
RQDGGASLVDPDLAEERGNWLAGYEENRGGVTLALLPNLNQVSGLHADGELRADTLSAAV
RTCMESCHKLYPVVQQAILRAVKRKAPPPEK
NT seq 816 nt   +upstreamnt  +downstreamnt
atgccggtagatacgaagcgcgtgcgcggaccggaggagtctcagtgcccgctgctgttt
ctgccccccgccgcgcagaccgcggagccccgggagccgcgcgcgggccgcgggaacgga
gaggtgcggccggtgttcgcgcgctgcggtctcgtgagccaggcgaagggctcgagctac
ctggaagcggggaacactaagatcctgtgctcggtttacgggccgcgcgagccggagcgg
cgggacgaggccggggtgcggagcggccgcctgctgtgcgacctgcggctcgcgccgttc
tcctgcgggaagcgcggcgcgtggatccagggcagcggggagcgggacctgtcgctcgcg
ctctccgagagcctgcaccccgccgtgtgcctgcaccggtacccgcgcgcgcagatcgag
gtgaacgtgatggttctggagaatgacggctcggttctggcgcacgcggtgacctgcgcc
tccatggcgctcgcggacgccggtatcgagatgtacgacgtggtcctgggctccgcgctg
cggcaggacggcggcgcgagcctggtggacccggacctcgcggaggagcggggcaactgg
ctcgcgggctacgaagagaaccggggcggcgtgacgctcgcgctcctgcccaacctgaac
caggtgtcgggactgcacgcggacggggagctgcgcgcggacacgctgagcgccgccgtg
cgcacgtgcatggagagctgccataaactgtatccggtggtgcagcaggccatcctgcgg
gccgtgaagagaaaagccccgccccctgagaaataa

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