Astyanax mexicanus (Mexican tetra): 103033299
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Entry
103033299 CDS
T05042
Name
(RefSeq) SH3 domain and tetratricopeptide repeat-containing protein 1 isoform X1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103033299
Membrane trafficking [BR:
amex04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
103033299
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_12
TPR_1
TPR_2
TPR_8
TPR_7
SH3_1
SNAP
TPR_10
SH3_9
ARM_TT21_4th
TPR_NPHP3
T6SS_VasJ
Motif
Other DBs
NCBI-GeneID:
103033299
NCBI-ProteinID:
XP_007248071
Ensembl:
ENSAMXG00000010934
UniProt:
A0A8B9LFM2
LinkDB
All DBs
Position
8:23418304..23439428
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AA seq
1326 aa
AA seq
DB search
MSTADESNTVNTVDSELSTENSSNDSDMNKDEPEVMEMECKPSRGRDSIKRTSAASEDNV
PTVLALQLAVAEGPDRLPADKNTQEVLCGKLRMLEADLTKITTLIDEFSAHLVSVNSEER
TIYITFKTFEEIWKFTSYHKMGFVGQSLENLLLEQEFWLTTLDQEHSGIEVSFKEETLNL
MYKGFLMQEGSFFGSCTVNQMFDSSTSGSDLYLEKGDIALFEPPFLGSGWTVLSLADGSR
GTKPRPALEPVIPFHEWFLKSCPESVLVGSGKAGCNLPFQMAVGICEATELYDGNGPDEL
SFEAGDRIIILGLLVTCFEWFMGKLERTGDTGLVRTTLVKATDSLCESEEIFLKDEDRTI
FNLNQEKIKEETIAFLKKTCQSDAATVYKLDLAKPESFQNNSNADIVDHVEMYADLRRKI
TSVLIETKEPNRSESLLGSAGLQTDSKSTEKESSQEIPHFTVCLEQGGSSPDGHHSLLSF
LSSCDHRPEYQLLYSAYPEFLLLHFEGHSDEEELVAYISDARETARKKRMSWAQSRLCFL
LGQLCAGRSKFSQARVYYEEALSVPRDYFTDMHLLSALYSNLALIYLTQKNTDKYFALSE
RYTALLMAVCDCLSGSEDPDVLKFALKKAILSGNKPAEARLCLLLAKLHLKLGEGMNALP
FLERLQILADEIPGACEKIRSHGFLLLARLFSDHHLTHLAESSARQACIQVSSSVTDCFC
SISLLLENAQELYGVDIPTQVAPCLMRAAAIMSDSLETIMEASLAHAHALCLSWLFQEHG
MPDRAIHYMCSLFIHASASSLSQHDTSSSLIWLAWLHICGLQHRAALEILDAVLSTLPEH
CTTQLEGVVYNMRAIALRHSGNVKEAAEGFQAAAEVSEEFEDRSNWAIALANFGFLCLQV
NAKRLAEEHLTQAVELFSELEDDEGHALSFGAVLLELGKFYVSQGFCEKGKICYEWALLI
AILNDSSESQLQATRQLCHLYGEVCPDEAQCIIYNEHQLNLLHQRGDRTLEGEILEKISQ
LYLSLGTERANRTALDYTKRSLGIFIDLGKKRKEAHGWLQAGKIYHILQQSELVDLYVQV
AQDIALSTGDTLFILELLEAAGDVFFNSTQEREKAICFYRDRALPIAVKSSSVRSQLRLC
NKLAELLLQLGQYVEAVEYAQTALDMSINLADRLNERVAFHRLATLYHCLSRFEMAEHHF
LKALSLCPSPLQFDEEALYYVRVYQTLGDIIFYDLKDPFDAAGYYHLALAAAVDLGNKKS
QLELCTRLATIYHNFLMDRDLSLQFYQRARAFASDLNIRRINLAPDQSFSTTSQYKIPAL
QASKET
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccgctgatgaaagcaacactgtgaacacagtggattccgagctttccacagag
aactccagcaatgattcggatatgaataaagacgaacctgaagtgatggaaatggaatgc
aagccatcgagaggaagagacagtatcaagaggacctcagcagcatctgaagacaatgtt
cccacagtgttggctctccagctggctgtggcagaaggaccggaccgacttcctgctgac
aagaacacacaggaagtcctctgcgggaagctacgcatgctggaggctgacctcaccaaa
atcacaaccctgattgatgaattttcagctcatttggtgtctgtcaacagcgaggaaagg
actatatatatcacttttaaaacatttgaggaaatatggaagttcacctcctaccacaag
atgggttttgtgggtcagtctttggagaatcttcttttggaacaggagttctggttgacc
actttagaccaagagcattcaggaattgaggtgtcgtttaaagaggagacactaaatcta
atgtacaaaggctttttaatgcaagaaggctctttttttgggagctgtacggttaatcag
atgttcgacagctccacatcaggcagtgacctttacctggagaagggggacatcgctctg
tttgagcctcctttcctaggctcaggatggactgtgctgtccttggcagatggatcaaga
ggaactaaaccgaggccagccctggaaccagtcattccttttcatgagtggtttctgaag
tcctgtcctgagagtgttttggttggcagtggaaaggcaggctgcaatctcccattccaa
atggctgtagggatctgcgaggcaacagaactgtatgatggtaacggaccagacgagctg
agttttgaggctggtgatcgcatcatcatcctaggcctactagtgacctgctttgagtgg
tttatgggcaagctggagcggactggtgatacaggacttgtcaggacgaccctggtgaaa
gcaacagattctctttgtgaatcagaggaaatttttttgaaagacgaggatagaacaatc
tttaacctgaaccaagaaaagatcaaggaggaaacaattgcttttctgaagaagacatgc
caaagtgatgctgctactgtctacaaacttgatttggcaaagccagaatcatttcaaaat
aattccaatgcagacattgttgatcatgttgaaatgtacgcagacctgagaagaaaaatc
accagcgttttgattgagacaaaggagccaaatagaagtgagagcttgctgggcagtgct
ggtctccagactgattcaaagtccaccgagaaagagtcatcccaggaaatccctcatttc
actgtgtgtttagagcagggtggttccagcccagatggacaccattccctcctgtccttc
ctcagcagctgtgaccaccggccagagtaccagctcctctacagtgcctacccggagttc
ctcctgctgcactttgagggccattctgatgaggaggagctggtggcatacataagtgat
gctcgggaaacagcaagaaaaaaacgcatgtcttgggcacaaagtagactctgctttctt
ctgggacagctctgtgcgggcaggtccaaattctcccaagctcgggtctattatgaagaa
gccttgagtgtacccagagactatttcacagacatgcaccttctctctgctctctattcc
aacctggccctcatctatctcactcagaaaaacacagataagtattttgccctgtctgaa
cgctacactgctttattgatggcagtctgtgactgtttatctggctcagaagaccctgat
gttttaaagtttgcattaaaaaaggcgattctgtctgggaacaagccagcagaagcccgg
ctctgcctcctgttagccaagctccatttgaagcttggagagggcatgaacgccttgcct
ttccttgaacggctgcagattttagctgatgagataccaggagcctgtgagaagataagg
agccatggtttcttactcttagcgaggctttttagtgaccatcatcttactcacctggct
gagagctcagcaagacaagcatgtatacaggtgtcatcctctgtcactgactgtttctgt
agcatctctctgctgttggagaacgctcaggagttgtatggagttgacatcccgacacaa
gtggccccgtgtttgatgcgagctgctgctataatgtctgatagtttggaaaccattatg
gaagccagcctggctcatgctcatgcgctgtgcctgtcatggctttttcaggagcatggc
atgcctgacagagctattcactacatgtgcagcctcttcatccacgcatctgcttccagc
ctcagccagcatgacaccagcagttctctcatatggctggcctggctgcatatctgtggc
ctgcagcaccgtgctgcactggaaatactggatgcagtgctgtccactctccctgagcac
tgcaccacccagctggaaggggtggtctacaacatgcgggccatcgccctgaggcattcc
ggcaatgtgaaagaggctgctgagggtttccaggctgcggctgaagtctccgaggagttt
gaagacaggagcaactgggccatagccctggccaactttggcttcttgtgtctacaagtg
aacgccaagaggctggctgaagagcacctcacacaggcagtggagctgttctctgagtta
gaggatgatgaaggccatgcactgagctttggtgctgtgcttctggagctgggaaagttc
tacgtgtcacagggtttctgtgagaaagggaaaatctgctatgagtgggccttgctgatt
gccatcctcaatgatagctcagagagtcagctgcaagccacccgtcaactgtgtcacctg
tatggagaagtttgcccagatgaagcacaatgcatcatatataatgagcaccagctgaac
ctgctgcaccagagaggagacagaaccctggagggggagatactggagaagatcagtcag
ctgtatctgagcctgggcacagagagggcaaacagaactgcactggactacaccaagaga
agtctggggatcttcattgacctggggaagaagaggaaggaggctcatggttggctacag
gcaggaaaaatctaccatatcctccagcagagtgagctggtggacctttatgtacaggtt
gcacaggacattgctctgagcacaggagatacactcttcatcctggagctgctagaagca
gcaggtgatgtgttcttcaacagtacacaggaaagagagaaagccatctgcttttacagg
gatcgtgctctccccatcgcggtaaagtcgagcagtgtgcgttctcagctcaggctgtgt
aataagctagccgagttgctgctacagttgggacagtatgtggaggctgtggaatatgca
cagaccgcactggacatgagcataaatcttgctgaccgtttaaatgagcgagtggcgttt
catcgcctggctacactgtatcactgtctgagtcggtttgagatggcagagcatcacttc
ctgaaggccctctccctgtgtccttcacccctgcagtttgatgaagaagctctttactac
gtcagggtgtatcagacactaggggatatcatcttctatgatttgaaggatccatttgat
gcagctggttactaccacttagccctggcagctgctgtggacctgggcaataagaaatcc
caactggagctctgcactcgcctggccactatttaccacaacttcctgatggaccgtgat
ctgtcccttcagttttaccagcgcgcacgagccttcgcctctgacctcaacatccgccgc
atcaacctggctccagatcagagcttcagcactacatcccagtacaaaatcccagccttg
caggcatcgaaagagacctga
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