Astyanax mexicanus (Mexican tetra): 103033325
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Entry
103033325 CDS
T05042
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103033325
Transcription factors [BR:
amex03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
103033325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
103033325
NCBI-ProteinID:
XP_007253837
UniProt:
A0A8B9RAH8
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Position
14:complement(19239414..19520487)
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AA seq
996 aa
AA seq
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MIRIFPDFSVQVTAAAGGAAGGMPAASAVGRVPGAANGNPQNVQGLATYQQSDPYWERPA
NASSCSATRPKTLHLGGQQHTSSPWLQALRKEKSRDAARSRRGKENFEFYELAKMLPLPG
AITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRIEGPPPNTSVKAIGSQRRRSPSSIA
SEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVELTGSSVFDYVHPGD
QVELAEQLGMKLPPGRGLLSQGGGAEDGASSASSSSHSETPEPVESSSPSHLSPDNTLER
SFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRIRMALTHNRSVPNQIMGMVVVAHALPPP
TINEVRIDCQMFVTRVNMDLNIVYCENRISDYMDLTPVDIIGKRCYHFIHAEDVEGIRHS
HLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNANEKNIIWVNYVLSNPEYKDT
PMDIAQLPNLPEKASESSETSDSESDSKENSEDNENSKSDGKGNQSSEHSEDPESDSKKH
AGRPSEQEMRRQEEGDSSSNPESQDSEDSLEPSDCEPERKEGRLAELGGLRIKVERYGDG
DGTEVQDSPSSSSEEEEDEDEEEEDEDEAGMKDCHSGGELSGPAVSKHQRRKKRRKKQQK
WDASRQRLRLSPPVVATPSPGSLDPALGEQPPLLPPPSPATASVLKIKTEMAEPINFDND
SSIWNYPPNREISRNESPYSMTKPPATHDNFPSPQSTGLQVAIPDSVLTPPGTEGGAGSR
KSNFTNSSSSSSNNSNSTPSSASSSASTSLAPHSSNSATSDPLSPPLSASPRDKQQGTPT
SQGSLLYSSDLEALQRLQQAGNMVLPLVHRVTATSTAAAPRVYTTGTIRYAPADVTLAMQ
GNLLPNAHPAAAAVNFVDVNGPGFGIDPKTPMEMLYHHVHRLNMSGPFGGTVSGAGLTQM
PAANVFTTAEGLFSSLPFPVYSNGIHTTQTLERKED
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagcgttcaggtgacggcggcggcaggtggcgcggcc
ggggggatgccggctgcctcggctgtggggagagtccccggcgcagctaacggcaacccg
cagaacgtccagggcttggccacgtaccaacaaagcgacccttactgggagaggccagct
aatgccagctcctgttcagccactaggcccaagacacttcaccttggagggcaacaacat
acctcatcaccatggttgcaggctctaaggaaggagaagtctcgtgatgcagcacgctcg
cggcggggaaaggagaactttgagttctacgagctggccaagatgctgccgctccctggc
gccatcaccagccagctggacaaagcctccatcatccgcctcaccatcagctacctgaag
atgagggacttcgccaatcagggggacccgccatggaacctgcgcattgaaggaccacca
cccaacacctcagtgaaagctattggatcccagcggaggaggagtccgagctcaattgcc
tcagaaatctttgagccacacctgggcagccacatcctgcagtccctggatggattcgta
tttgcactaaacaaggaggggaggtttttgtacatctcagagaccgtgtccatatacctg
gggctttcacaggtggagttgacgggcagcagcgtgtttgattatgttcacccgggtgat
caggtggagctggcagagcagctggggatgaagcttcctccaggccgggggctgctgtct
cagggaggcggtgctgaagatggtgccagctccgcctcctcctcctcccactccgaaacc
ccagagccagtggagtctagcagtcccagccacctctctccagacaacactcttgagcgc
tccttcttcatccgaatgaagtccacactgaccaagagaggcgttcacatcaagtcctcc
ggctacaaggtgatccacatcacaggcaggctgaggatacgaatggctctaacgcacaat
cgcagtgtgcccaatcagatcatgggcatggtggtggtcgcccatgctctccctcccccc
actattaacgaggttcgcatagactgccagatgttcgtcacacgggtcaacatggacctc
aacattgtctactgtgagaatagaattagtgattatatggacctgacacctgtggacatc
ataggaaagagatgttatcatttcattcatgcagaggatgtggaaggcattcggcatagc
catttagacttgatgaacaagggccagtgtgtgaccaaatactaccgctggatccagaag
aatggtggctatatttggatccagtccagcgctaccatcgccatcaatgccaagaatgcc
aacgagaagaacatcatctgggtcaactatgtcctcagtaatccagaatacaaggacaca
cctatggacatcgcacagcttccaaacctgccagaaaaagcctcagagtcctcagaaaca
tctgactcggagtccgactctaaagagaactctgaagacaatgaaaattctaaatcagac
gggaaagggaatcaatcttcagagcacagcgaggacccagagtcagacagcaaaaaacat
gcaggtcggccatcagagcaggagatgaggcggcaggaggagggtgacagctccagtaac
ccagagagccaggacagcgaggacagcctggagccatctgactgtgagcccgagcgcaag
gagggacggctggccgagctgggtggcctgcgcatcaaagtggagcgctacggagatgga
gatgggacggaagtccaggattccccctcatcctcctctgaagaggaagaagatgaagat
gaggaagaagaggatgaagatgaggctggaatgaaggactgtcatagtggaggggagctg
agcggacctgcagttagcaaacaccagagacggaagaagagaaggaaaaagcagcagaaa
tgggatgccagtcgccagcggctacgactttcacccccggtcgtcgccaccccaagcccc
ggtagtctggaccctgcattgggcgagcagccccccttacttccaccgccctccccagcc
accgcttctgtgctgaagattaagacggagatggccgagcccattaacttcgacaacgac
agcagcatctggaactacccacccaaccgggagatctcccgcaacgagtcgccatacagc
atgaccaagcccccagccacacacgacaactttccatccccccagtccactggcctgcag
gtggccatcccagactcggtcctcactccgcccggcactgaaggaggagcgggcagcagg
aagtccaacttcactaacagcagtagcagtagcagcaacaacagcaacagcaccccctct
tcagcttccagctcagcttccacaagcctggctccacactcttccaactctgcgacctct
gaccccctttctccccctctgtcagcttcaccgcgggacaaacagcagggcacgcccacc
tcgcagggttctcttctctacagcagtgacctggaggccctgcagcggctgcagcaggca
gggaacatggtgcttcctctagtgcaccgggtcacggccaccagcacagcagccgcccca
cgcgtgtacaccacgggcaccatccgctacgcaccagctgacgtcacactggccatgcag
ggcaacctgcttcccaacgcccaccccgctgcagcagccgtcaacttcgtggacgtcaac
gggcccggcttcggcatcgaccccaagacgcccatggagatgctgtaccaccacgtgcac
cggctcaacatgtctgggccgttcggaggcacggtcagcggggccggactcacgcagatg
cccgccgccaacgtcttcaccaccgcagagggactcttttcctcgctgcccttccccgta
tacagcaatggcatccacaccacacagactctggagcgcaaagaggactga
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