KEGG   Astyanax mexicanus (Mexican tetra): 103033340
Entry
103033340         CDS       T05042                                 
Symbol
shq1
Name
(RefSeq) protein SHQ1 homolog
  KO
K14764  protein SHQ1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:amex03009]
    103033340 (shq1)
Ribosome biogenesis [BR:amex03009]
 Eukaryotic type
  Sno RNPs
   Box H/ACA snoRNPs
    103033340 (shq1)
SSDB
Motif
Pfam: SHQ1 SHQ1-like_CS
Other DBs
NCBI-GeneID: 103033340
NCBI-ProteinID: XP_022518458
Ensembl: ENSAMXG00000043822
LinkDB
Position
5:1682265..1799982
AA seq 587 aa
MITPAFELSQDPDYLTLVIRVPYTRTSEFDVYIDGEDFKFYAKPYFLRLTLPGRIVQDGR
EKASFDIDKGLFTMRVPKETAGQDFEGLQMLTSLLAPKGCRSAKPLVEDVGTSGRSEADE
DEDEDEDEEEDFDWQVEQEPYVESSEDDLKKLQKYGFGNLRTGVFSRLQEELSDVIDLED
PENSTPAMRRSSRLNAETTIFCADHYLCDLYEGEETRQIHLEFKPWWSELKPDADLSEPA
VIFTDDEKEQMRKFTNRSYLLDKATRHQVWLGLVDVILAYVYDVRTTEGEHNVESAWTIR
KLSGTLSWLETYHSVQEVLVSFGRRVLCYPLHRHFSLITTAVRDAAHIFQCGKACVLKCL
LSIHKIFRENEPAYILNDLYISDYCVWIQRVKSRHVVALADPLRKSELQKDHLDLELIIL
EKAAELVVEEEEEEKKKERKEEETSSSSSSEEEEEEDSTSSSEEEEEKEAEKDNSSVFQS
SETQERRDQLIQELSERMEEGLRMEEEDVPQSSRPSSSLSSQRPAGDASPSSAATAAGGG
GGRTSRALVDISGQSQSCRKTLNIVDTEDLDSDDEEDEYEEKKTANH
NT seq 1764 nt   +upstreamnt  +downstreamnt
atgatcaccccggcgtttgagctgagtcaggacccggattatctcacgctggttatccga
gtgccgtacacccggacgtctgagtttgatgtttacattgatggggaagacttcaagttc
tacgccaagccttattttctcaggttgactctgcctgggaggatagtgcaggatggaagg
gaaaaggcctcgtttgacattgataaaggactgtttacgatgcgcgttcccaaggagacg
gcgggtcaggacttcgagggtcttcagatgctgacgagtcttctggctcctaagggatgt
agatccgctaaacccctggtggaggacgtaggcacgagcggcagaagcgaggcagatgag
gatgaggatgaggatgaagatgaagaggaggattttgattggcaggtagagcaggagccg
tatgtagaatcttcagaggacgacctgaaaaagctgcagaaatacgggtttgggaacctg
aggaccggagtcttctccagactgcaggaggagctgtcagatgttattgatttagaagat
ccagaaaattcaactcctgctatgcggagaagcagccgcttgaatgctgagaccaccata
ttttgtgctgatcactatctgtgtgatctgtatgaaggtgaggagacgaggcagattcac
ctggaatttaagccgtggtggagcgagctgaagccagacgctgatctctctgaacctgct
gtgattttcacggacgatgaaaaagagcagatgaggaaattcaccaatcgttcctacctg
ctggataaagccacccgacaccaggtttggctcggcctggtggacgtcatcctcgcctat
gtgtatgacgttcgcactacagaaggagaacacaacgtggagtcagcatggaccatcagg
aaactcagtggaactctgagctggcttgagacgtatcactcagtgcaggaggtgctggtg
tcgtttgggaggagggtgttgtgttatccgctacaccgccacttctctctgatcaccacc
gcagtgagagacgccgctcacattttccagtgcggtaaagcctgcgtcctgaagtgcctc
ctctccatccataagatcttcagagagaacgagccggcctacatcctcaacgacctctac
atctcagactactgcgtctggatccagcgggtgaaatcgaggcacgtggtggctctggct
gatccactgcgtaaatccgagcttcagaaggaccatttggacctggagctgatcattctg
gagaaagctgctgaactggtggttgaggaggaagaggaggagaaaaagaaggagagaaaa
gaggaggaaacatccagcagcagcagtagtgaagaagaggaggaggaagactctaccagc
agcagtgaagaagaagaggaaaaggaggcggagaaagataacagcagcgtttttcagtct
tcagaaacacaagaacggagagatcagctgatccaggagctgagcgagaggatggaggag
gggctgaggatggaggaggaggacgtccctcagtcctcccgtccctccagcagtctcagc
tcacagagaccagcaggagacgcgtccccgtcctctgcagctacagcagctggaggagga
ggaggacgaaccagcagagctctggtggacatatctggacagtctcagagctgtaggaag
acgctgaacatcgtggacactgaggacctggacagcgacgacgaggaggacgagtacgag
gagaagaagacagcaaatcactga

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