KEGG   Astyanax mexicanus (Mexican tetra): 103033393
Entry
103033393         CDS       T05042                                 
Symbol
pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
  KO
K17943  pumilio RNA-binding family
Organism
amex  Astyanax mexicanus (Mexican tetra)
SSDB
Motif
Pfam: PUF PUF_NOP9
Other DBs
NCBI-GeneID: 103033393
NCBI-ProteinID: XP_007245733
Ensembl: ENSAMXG00000020607
LinkDB
Position
3:50319710..50344059
AA seq 1154 aa
MSVACVLKRKAVLWQDSFSPHLRLPPPDRPLPSMPVVLSAAGHAPQPGPAPQAPPPAQGA
GRSQDDAMVDYFFQRQHGEQPGYNNGKHRWPTGDNIHGDNQVRSMDELNHDFQALALEGR
AMGEQLLTGKKFWESDDSGKDGPKGIFLDQWRDSAWGASDHSVSQPIMVQRRPGQGFHGV
GEAGSVLSPRSESGGLGVSMVEYVLSSSPGEKLDSCLRKGAFGPRDAEADDSEKRAEPKP
KTTFDPERKELKESEPDPMDNPNGLPSQNGLDVDVKDFSRTPGNCPPAGPEVELGGPEMA
GVAGPKPAEEFPNVEPQNVTLDPMESVSMETLQFDYAGSQLPLDSTAATVGLFDYNSPQQ
LFQRPSALAMQQLTAAQQQQYALAAAQQPHIGLAPAAFMPNPYIISAAPPGTDPYAAGLA
AAATLGPAVMPPQYYGVTPWGVYPANLFQQQAPAPSNSANQQQTAQTQQNQQQVMRAGGN
QRPLTPSQGQQGQQTDQLVAAAAVNSALAFGQGLAAGVPGYPVLAPAAYYDQTGALVVNT
GARSGPVRLMAPASVIISPTAAVAAAAASASGANAGLGGGASGAFRALNSQQAPGQQGGG
ALGGSSFYGSGSPSSSSQSSSLFSQGSGQPGSSSLGFNANPSSSLGATLGATLGGFGTAG
VLPNSSSSGSRRDSLTGSSDLYKRTPSSLTPIGHGGFYNGLGFSSSPGPVGMPLPNQGPS
HSLTPPPSLSTHGSSSSLNLGGLTNGSGRFISAAPGAEAKYRSATTGSSLFSPSSQLFPS
SRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHVMEFSQDQHGSRFIQLKLERAS
SAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYG
CRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPHALQFIIDA
FKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH
GRAEDKSKIVSEIRGNVLGLSQHKFASNVVEKCVTHSLRAERAMLIDEVCSMADGPHSAL
YTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNG
VDLGPLCAPPNGIM
NT seq 3465 nt   +upstreamnt  +downstreamnt
atgagcgtagcgtgcgtgttgaagaggaaagctgtgctctggcaggattcgttcagcccc
cacctcagactgcctccccctgacaggccattacccagcatgcctgtggtcctgagtgcc
gcgggccacgccccccaacctggccctgctccacaggcccctccccctgcacagggggcg
gggcgttctcaagatgatgcaatggtggattacttcttccagcggcaacatggcgagcag
cctggatacaataatggcaaacaccgctggcctaccggtgataatatccatggtgacaac
caggtgcggtcgatggatgagctcaaccatgactttcaggctctggctctggaagggaga
gccatgggagagcagctcctcacaggaaagaagttctgggaatctgatgattcagggaag
gatggaccaaaagggatctttctggaccagtggagagacagtgcctggggagcttctgat
cattcagtttcccagccaatcatggtccagcgtcgaccaggccaagggttccatggcgtt
ggagaggcagggtcagtgctttctcctcgttctgagagcggtggattgggagtctccatg
gtggaatatgtcctgagctcctccccaggagagaagctcgactcctgtctacgtaaagga
gcatttggtccacgggatgctgaggctgatgactctgaaaaaagagcagaaccaaaaccc
aagactacatttgatcctgaaaggaaagagctgaaggaatctgagcctgatcccatggac
aaccccaacggactgcccagtcagaatgggctggacgtggatgttaaagacttcagccgt
actcctggtaattgccctcctgctggtcctgaagtggagctgggtggacctgagatggct
ggagtggcaggaccaaaaccagcggaggaattcccaaatgttgagccccagaacgtgacc
cttgaccccatggaatctgtttccatggagactctgcagttcgattatgctggcagccag
ctgccccttgactccacagctgccactgttggcctgtttgactacaactctcctcagcag
ctgttccagaggcccagtgctctggccatgcagcagttgacagctgcgcagcagcagcag
tacgccctcgctgcagcccagcagccacacattggattggctcctgctgctttcatgccg
aacccttacattatcagtgcagccccacctggcacagacccctacgctgctggtcttgct
gcagctgccactcttggaccagcagtgatgccccctcaatattatggggtgactccctgg
ggcgtctatcctgccaacctgttccagcagcaggcacctgccccctccaactcagccaat
cagcagcaaacagcacagactcagcagaaccaacagcaggtgatgcgagctggaggtaac
caacgacccctgacccccagccagggtcaacaggggcagcagactgaccagctggtagca
gctgcagctgtgaactcggccttggcttttgggcaaggactagctgctggtgttcctggg
taccctgtgcttgctccagctgcatactatgaccagactggagctctagtggtgaacaca
ggagctcgcagcggccctgtccgacttatggctcctgcctctgtcatcatcagcccaact
gcagccgttgcagctgcagctgcctcagccagtggggctaatgcaggccttgggggcgga
gcaagtggagcatttcgtgcattgaattcccagcaagctccaggtcagcagggtggtggg
gctctaggaggaagctccttttatgggagtggttctccaagctcctcctcgcagagctcc
tctctgttctctcaaggttctggccaacccggaagctcctctcttggattcaatgctaac
ccatcttcgtcccttggtgcaacactcggagcgacgcttggaggttttggaacagcaggt
gtgttgcccaattccagctccagtggatctcgccgtgattctttgacgggcagttctgat
ttatacaagcgcacacccagcagcctcactcctattggccatggaggcttctacaacggc
cttggattcagctcctcccctggcccggttggcatgccacttcctaaccaagggccctcc
cactctctgactcctccaccgtctctttcaacccatggatcctccagcagtctcaacctt
ggtggtctgactaatggcagtggccgctttatctccgctgcccctggagctgaggccaaa
taccgcagtgcaactaccggctcctccctcttcagtcccagcagccagctcttcccatca
tcacgactacgctacggcatgtccgatgtgatgccgtctggccgcagccgtctgcttgag
gatttccggaacaaccgctatcccaaccttcagctacgtgagatcgcaggccatgtcatg
gagttctctcaggaccagcatggctccaggttcatccagctgaagttggagagagcgagc
tctgcagagcgccagctggtcttcagtgaaattctgcaggctgcctaccagctcatggtc
gacgtgtttggaaattacgtcatccagaagttctttgagttcggcagcctggatcagaag
ttggcacttgcagagcgcatccgtgggcatgtgctctctctggctctgcagatgtatggc
tgcagagtgatccagaaagcgctggagttcatcccttctgaccagcaagtcattagcgag
atggtgcgggagctggacggccacgtgctgaagtgtgtgaaggatcagaatggtaaccac
gttgtgcagaagtgcatcgagtgtgtgcagcctcatgctctccagttcatcatcgatgcc
ttcaaaggacaggtgtttgctttgtccacacacccctacggctgccgggtgatccagcgt
attttggaacactgtcttccagagcagaccctgccaatactggaagagttacaccaacac
actgagcaactggtccaggatcaatatggaaactatgtaattcagcatgtgctggagcat
ggccgtgcagaggacaagagcaagattgtctcagagatcagaggaaatgttttggggctc
agccagcacaagtttgccagtaatgtggtggagaagtgtgtgacgcactccctgcgcgcc
gagagggccatgctgattgatgaagtgtgcagtatggcggacgggccccacagtgcctta
tacaccatgatgaaggaccagtacgccaactacgttgtgcagaaaatgatcgatgtcgcc
gagccaactcagcgcaagatcgtaatgcacaagatacggcctcacattgcaaccctgagg
aagtacacatatgggaagcacatcctggccaagctggagaagtactacatgaagaacggc
gtcgacttgggcccactctgcgctccccccaacggcatcatgtaa

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