Astyanax mexicanus (Mexican tetra): 103033393
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Entry
103033393 CDS
T05042
Symbol
pum1
Name
(RefSeq) pumilio homolog 1 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
amex
Astyanax mexicanus (Mexican tetra)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
Motif
Other DBs
NCBI-GeneID:
103033393
NCBI-ProteinID:
XP_007245733
Ensembl:
ENSAMXG00000020607
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Position
3:50319710..50344059
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AA seq
1154 aa
AA seq
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MSVACVLKRKAVLWQDSFSPHLRLPPPDRPLPSMPVVLSAAGHAPQPGPAPQAPPPAQGA
GRSQDDAMVDYFFQRQHGEQPGYNNGKHRWPTGDNIHGDNQVRSMDELNHDFQALALEGR
AMGEQLLTGKKFWESDDSGKDGPKGIFLDQWRDSAWGASDHSVSQPIMVQRRPGQGFHGV
GEAGSVLSPRSESGGLGVSMVEYVLSSSPGEKLDSCLRKGAFGPRDAEADDSEKRAEPKP
KTTFDPERKELKESEPDPMDNPNGLPSQNGLDVDVKDFSRTPGNCPPAGPEVELGGPEMA
GVAGPKPAEEFPNVEPQNVTLDPMESVSMETLQFDYAGSQLPLDSTAATVGLFDYNSPQQ
LFQRPSALAMQQLTAAQQQQYALAAAQQPHIGLAPAAFMPNPYIISAAPPGTDPYAAGLA
AAATLGPAVMPPQYYGVTPWGVYPANLFQQQAPAPSNSANQQQTAQTQQNQQQVMRAGGN
QRPLTPSQGQQGQQTDQLVAAAAVNSALAFGQGLAAGVPGYPVLAPAAYYDQTGALVVNT
GARSGPVRLMAPASVIISPTAAVAAAAASASGANAGLGGGASGAFRALNSQQAPGQQGGG
ALGGSSFYGSGSPSSSSQSSSLFSQGSGQPGSSSLGFNANPSSSLGATLGATLGGFGTAG
VLPNSSSSGSRRDSLTGSSDLYKRTPSSLTPIGHGGFYNGLGFSSSPGPVGMPLPNQGPS
HSLTPPPSLSTHGSSSSLNLGGLTNGSGRFISAAPGAEAKYRSATTGSSLFSPSSQLFPS
SRLRYGMSDVMPSGRSRLLEDFRNNRYPNLQLREIAGHVMEFSQDQHGSRFIQLKLERAS
SAERQLVFSEILQAAYQLMVDVFGNYVIQKFFEFGSLDQKLALAERIRGHVLSLALQMYG
CRVIQKALEFIPSDQQVISEMVRELDGHVLKCVKDQNGNHVVQKCIECVQPHALQFIIDA
FKGQVFALSTHPYGCRVIQRILEHCLPEQTLPILEELHQHTEQLVQDQYGNYVIQHVLEH
GRAEDKSKIVSEIRGNVLGLSQHKFASNVVEKCVTHSLRAERAMLIDEVCSMADGPHSAL
YTMMKDQYANYVVQKMIDVAEPTQRKIVMHKIRPHIATLRKYTYGKHILAKLEKYYMKNG
VDLGPLCAPPNGIM
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtagcgtgcgtgttgaagaggaaagctgtgctctggcaggattcgttcagcccc
cacctcagactgcctccccctgacaggccattacccagcatgcctgtggtcctgagtgcc
gcgggccacgccccccaacctggccctgctccacaggcccctccccctgcacagggggcg
gggcgttctcaagatgatgcaatggtggattacttcttccagcggcaacatggcgagcag
cctggatacaataatggcaaacaccgctggcctaccggtgataatatccatggtgacaac
caggtgcggtcgatggatgagctcaaccatgactttcaggctctggctctggaagggaga
gccatgggagagcagctcctcacaggaaagaagttctgggaatctgatgattcagggaag
gatggaccaaaagggatctttctggaccagtggagagacagtgcctggggagcttctgat
cattcagtttcccagccaatcatggtccagcgtcgaccaggccaagggttccatggcgtt
ggagaggcagggtcagtgctttctcctcgttctgagagcggtggattgggagtctccatg
gtggaatatgtcctgagctcctccccaggagagaagctcgactcctgtctacgtaaagga
gcatttggtccacgggatgctgaggctgatgactctgaaaaaagagcagaaccaaaaccc
aagactacatttgatcctgaaaggaaagagctgaaggaatctgagcctgatcccatggac
aaccccaacggactgcccagtcagaatgggctggacgtggatgttaaagacttcagccgt
actcctggtaattgccctcctgctggtcctgaagtggagctgggtggacctgagatggct
ggagtggcaggaccaaaaccagcggaggaattcccaaatgttgagccccagaacgtgacc
cttgaccccatggaatctgtttccatggagactctgcagttcgattatgctggcagccag
ctgccccttgactccacagctgccactgttggcctgtttgactacaactctcctcagcag
ctgttccagaggcccagtgctctggccatgcagcagttgacagctgcgcagcagcagcag
tacgccctcgctgcagcccagcagccacacattggattggctcctgctgctttcatgccg
aacccttacattatcagtgcagccccacctggcacagacccctacgctgctggtcttgct
gcagctgccactcttggaccagcagtgatgccccctcaatattatggggtgactccctgg
ggcgtctatcctgccaacctgttccagcagcaggcacctgccccctccaactcagccaat
cagcagcaaacagcacagactcagcagaaccaacagcaggtgatgcgagctggaggtaac
caacgacccctgacccccagccagggtcaacaggggcagcagactgaccagctggtagca
gctgcagctgtgaactcggccttggcttttgggcaaggactagctgctggtgttcctggg
taccctgtgcttgctccagctgcatactatgaccagactggagctctagtggtgaacaca
ggagctcgcagcggccctgtccgacttatggctcctgcctctgtcatcatcagcccaact
gcagccgttgcagctgcagctgcctcagccagtggggctaatgcaggccttgggggcgga
gcaagtggagcatttcgtgcattgaattcccagcaagctccaggtcagcagggtggtggg
gctctaggaggaagctccttttatgggagtggttctccaagctcctcctcgcagagctcc
tctctgttctctcaaggttctggccaacccggaagctcctctcttggattcaatgctaac
ccatcttcgtcccttggtgcaacactcggagcgacgcttggaggttttggaacagcaggt
gtgttgcccaattccagctccagtggatctcgccgtgattctttgacgggcagttctgat
ttatacaagcgcacacccagcagcctcactcctattggccatggaggcttctacaacggc
cttggattcagctcctcccctggcccggttggcatgccacttcctaaccaagggccctcc
cactctctgactcctccaccgtctctttcaacccatggatcctccagcagtctcaacctt
ggtggtctgactaatggcagtggccgctttatctccgctgcccctggagctgaggccaaa
taccgcagtgcaactaccggctcctccctcttcagtcccagcagccagctcttcccatca
tcacgactacgctacggcatgtccgatgtgatgccgtctggccgcagccgtctgcttgag
gatttccggaacaaccgctatcccaaccttcagctacgtgagatcgcaggccatgtcatg
gagttctctcaggaccagcatggctccaggttcatccagctgaagttggagagagcgagc
tctgcagagcgccagctggtcttcagtgaaattctgcaggctgcctaccagctcatggtc
gacgtgtttggaaattacgtcatccagaagttctttgagttcggcagcctggatcagaag
ttggcacttgcagagcgcatccgtgggcatgtgctctctctggctctgcagatgtatggc
tgcagagtgatccagaaagcgctggagttcatcccttctgaccagcaagtcattagcgag
atggtgcgggagctggacggccacgtgctgaagtgtgtgaaggatcagaatggtaaccac
gttgtgcagaagtgcatcgagtgtgtgcagcctcatgctctccagttcatcatcgatgcc
ttcaaaggacaggtgtttgctttgtccacacacccctacggctgccgggtgatccagcgt
attttggaacactgtcttccagagcagaccctgccaatactggaagagttacaccaacac
actgagcaactggtccaggatcaatatggaaactatgtaattcagcatgtgctggagcat
ggccgtgcagaggacaagagcaagattgtctcagagatcagaggaaatgttttggggctc
agccagcacaagtttgccagtaatgtggtggagaagtgtgtgacgcactccctgcgcgcc
gagagggccatgctgattgatgaagtgtgcagtatggcggacgggccccacagtgcctta
tacaccatgatgaaggaccagtacgccaactacgttgtgcagaaaatgatcgatgtcgcc
gagccaactcagcgcaagatcgtaatgcacaagatacggcctcacattgcaaccctgagg
aagtacacatatgggaagcacatcctggccaagctggagaagtactacatgaagaacggc
gtcgacttgggcccactctgcgctccccccaacggcatcatgtaa
DBGET
integrated database retrieval system