Astyanax mexicanus (Mexican tetra): 103033401
Help
Entry
103033401 CDS
T05042
Name
(RefSeq) spondin-1-like
KO
K24427
spondin-1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103033401
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
Thrombospondin domain-containing proteins
F-spondins
103033401
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_1
Spond_N
TSP1_spondin
Reeler
TSP1_CCN
TSP1_ADAMTS
Motif
Other DBs
NCBI-GeneID:
103033401
NCBI-ProteinID:
XP_022539540
LinkDB
All DBs
Position
24:complement(23290451..23412954)
Genome browser
AA seq
777 aa
AA seq
DB search
MLHAGMGMVLLCCVLSAVLLGAPRPAGASEGYCRTLRTQRRGARRDGHNDYRLRVEGDPD
TYQPGSTYRVSLYASSPSYFRGFTLIALKEGREGVSPDDYAGNFKIIDEEETQFMTSCPP
AVTESIPRRRTRIQVFWTAPPSGSGCVILKASIVQRRIIFFQDEGSLTRRLCEQDPLRAM
EKPLQDCCACGTAKYRVTFYGNWSEKVHPKDYPRRANHWSALIGASHSRNYVLWEYGGYA
SEGVRQVAELGSPVKMEEEIRQKGDDVMTVIKTKAQWPAWQPLNIRAAPSAEFSVDRAHH
LMSFLTMLGPSPDWNVGISGENLCTQECGWVQRLVKDLLPWDAGTDSGVTYESPNKPTNP
QERIRPLTSLDHPQSPFYSPHGGPITPLARVVVERIARKGEQCNTVPDTVDDIVADIPPE
DTEEGDNTPETCIYSNWSPWSACSSSTCDKGRRMRQRMLKAQLDATVPCLHTQDFEPCMG
PGCREEEPSTCMLSEWISWSPCSASCGMGMRSRERYIKQFPEDGSSCREPTEETEKCVVN
EDCSPSSCIVTEWTDWEPCSVSCGLGMRRRVRMMKMDTSDGSPCRVPLEEVEKCMMPECN
ALSCMVSPWSEWGHCSVTCGVGMRIRRRMMKTPALPNQCGDPLEEVEKCMLPECPVDCML
SDWSDWSECNKSCGKGHMIRSRMVKLEAQFGGVPCPETVQRKKCKIRKCSKPEKGNKDRA
GRSVCKLQPWSSWTECSKLCNSGIQERVKAVRKTGKGSHSNGCKPKKEIRTCNTQPC
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgctgcacgcgggcatggggatggttttgctgtgctgtgttctgagcgcggtgctgctc
ggagctccgcggccggcgggcgcttcagagggctactgccggaccctcaggacgcagcgc
aggggcgccaggagagacgggcataacgactacagactgcgcgtggagggagacccggac
acctaccagcctggcagcacttacagagtgagtttgtacgcctccagtccgtcttacttc
cgaggcttcaccctgattgctctgaaggaaggcagagaaggagtcagtcctgatgattat
gccggcaatttcaagatcatagacgaggaggagactcagtttatgaccagctgccctccg
gctgtcactgagagtatccccaggagacgcactcggatacaagtgttctggacagcgccc
ccttctggcagcggctgtgtcatacttaaggcgagcatcgtgcagaggaggatcattttc
ttccaggatgaaggctctctcaccaggaggctgtgtgagcaagatcccctcagagcgatg
gagaagcccctgcaggactgctgcgcttgtggaacagccaagtaccgggtcaccttctac
gggaactggtcagagaaagtgcatcccaaagactaccccaggcgtgccaatcactggtcg
gctctgattggagcctctcactccaggaactacgtgctgtgggaatacgggggatatgcc
agtgagggggtccgtcaagtggctgaactcggctctcctgtgaagatggaggaagaaata
cgccaaaagggtgatgacgttatgacagttatcaagactaaagctcagtggcctgcctgg
cagcccctcaatattcgtgcagctccatctgctgagttttctgtggaccgagctcatcac
ctcatgtcctttctgaccatgttgggtcccagtcctgactggaacgtggggatctcaggg
gagaacctgtgtacgcaggaatgcggctgggtgcagaggctggttaaagacctgctgccg
tgggacgctgggacagacagcggagttacgtatgagtcccccaacaaacccacaaacccc
caagagaggatccggcccctcaccagtctggaccacccccagagtcctttctacagccct
catggtggtcccatcacacccctggcccgagtagtggtggagaggatcgccagaaaggga
gagcagtgcaacaccgtgccggacaccgtggacgatattgtggcggacatccctccggag
gatacggaagaaggagacaacactccagagacgtgtatctactccaactggtctccgtgg
tcagcctgcagctcctccacctgcgataagggccggcggatgaggcagaggatgctgaag
gctcagctggacgccaccgtgccctgccttcacacgcaggactttgagccctgcatgggt
ccaggctgcagagaagaggagccgtctacgtgcatgctgtccgagtggatcagctggtcc
ccctgcagcgcgtcatgtggaatgggcatgaggtccagagaacgctacataaaacagttt
cctgaggatggatccagctgcagggagcccaccgaggagacagagaagtgtgtggtcaat
gaggactgctctcccagcagctgcatagtcacagagtggactgactgggagccgtgcagt
gtgagctgtggattagggatgaggaggagagtgaggatgatgaagatggacacctcagat
ggatctccatgccgagtgccactagaagaagttgagaagtgcatgatgcctgagtgcaat
gcgctgtcctgcatggtgtcaccgtggtcagagtgggggcactgcagtgtgacgtgtgga
gtgggcatgcggatacggcggcgcatgatgaagaccccggctctgcccaatcagtgtgga
gatccactggaagaggtggagaagtgcatgctgccggaatgccctgtggactgtatgctg
tctgactggtccgactggtcggagtgcaataagtcctgtgggaagggtcacatgatccgc
tcccgcatggtgaagttggaggctcagtttgggggagtgccatgtccggagacagtgcag
aggaagaagtgtaaaatcagaaaatgcagcaaacctgagaaagggaacaaggaccgcgca
ggacgttcagtttgcaaactgcagccctggtccagctggacggagtgctccaagctgtgt
aactctgggatccaggagcgagtgaaggccgtgaggaagacgggcaaaggctcccattcc
aacggctgcaagcccaagaaagaaatccgcacctgcaacacgcagccctgctaa
DBGET
integrated database retrieval system
