Astyanax mexicanus (Mexican tetra): 103033417 Help Entry 103033417         CDS       T05042                                  Symbol spg11 Name (RefSeq) spatacsin   KO K19026   spatacsin Organism amex  Astyanax mexicanus (Mexican tetra) Brite KEGG Orthology (KO) [BR:amex00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:amex03400]     103033417 (spg11) DNA repair and recombination proteins [BR:amex03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      103033417 (spg11) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C DUF7368 Motif Other DBs NCBI-GeneID:  103033417 NCBI-ProteinID:  XP_007231256 Ensembl:  ENSAMXG00000000846 UniProt:  A0A8B9GX48 LinkDB All DBs Position 2:50488811..50535463 Genome browser AA seq 2386 aa AA seqDB search MLSRPEARVQKALEVALLPENDLCKDVHNTVKAKMAKGCSLLCCLNAGGKLAVSDVSERG GPVHVLEDSHTDFFWEVLTERGKTDGSPRLLTVGPACELRLHEVDPEIPPSLLFEYPAHR LLQLPKEKDSRVNELVSAKLLSFSDGRCFLLLNMAVLVQLLYVEGSVEPEAVSSCLINLP PEIRETFVDYQLCRSTLFVLTSTGFIYVFDSVEGKHLATVNLPEYYASRQREAESVTPLS SFCLLHISQDLSMAVAATSQNQALALDLNDYFRIHTDQLLCQQSPTLPPLIPTKPCDQDS ISSVAHSQSVLGINFQTDHSWEARLKLLYKKAKATEPPALRLPWYGDVPNSECRRMAATA NLGQPCAPPGGILTSFTVPEQTTPTMLNVSEFSVVLTFTSAGNSSTMLAHWDLESQSVTY HCADAPAAPVRRSEEEHLSLILKESGLSLVLFTVSQEELLNRLMVFGSAGVVDSLCHLND WGRCSMPIHALQAGLKNRQLDMVDFFLKSKENILCPPTGYGVLEQSPANTTQMQLKNAQD LCPALDLLHSAIRDTYAEAQSQQFCEQLLNITLNFLNTQIRVLLSSAPELDANLQECVKI LSGYISELRTYLRKYPWLVGGDQTPAPKQPPDMTMEELWESLSVEDVVKQAILCSEIPRA QAYLRKHSCPEQKLEELRRTGLRLAFNCLTHRDLQQATTLLTNMGFNVKEQLHSICVYTA DRDLRAYMVEELKRQNHLSSEEMEKVEFIKQIENLCSAPAARCLKAVDKNRVLQISQSEV ENRALLQEMHGPLSSSFQSLLGSVRLDWVRHWDNNTQKTVLLSRLPEPLLGSCDPAVLWS YLTSLHDQTRNTAWLTSMAAQDRENTAAPQWPALTADIVNGNTCCSGYMRDQILDMLARQ EVFVQSEISDFEQLLWRLGQAGGVMRGNSGPPVPQFSAAQGQDFHTHFIQHCLENSLHYL LYTYLEHYRLTPSNCPAVGDRGLYEIYPWFEMMVKLQRITRDLTDPERVFQASLTSAQVL LPGSQASVSSMLLEGHSLLALSTIMFGPGGIDQVVKEGEKGQDALCRVDPQLLRMALSPY PKLKAALFPHSGSRASSACDISIYQLMQCLHPLDPSRLFGWQSANTLGSAETSTELPHFS SPHLVNKYALIENLDFLYYLQHGRPSFAYGIVIIQHLANSNNMKLQISLAVEQAYTLGLL NFSSPSVAAACVCFCELLGVCSLKLRVDLKALNLILKLWSQNCEESSLASLRQSLVEKVN KLVAAERKTAEELLLHLEGAVRDNVERRCISRSSYEAGQEWALPVQFCHLHDLPLSAGYL RDCASDGQWLNFLLFVQLHQYPPQQVRSLVTSFTPALQAHLFLAFQDLQVIRPQGAMEVQ GDSLPPLPMEESSEAPKDLFQVLLESQEKTSPWRHLLTEAVEQHSPPLTVLAACNQDAEL LQCLCVWILTSVDEEVAQEATSHINENPGHHTWNLHDLSVLWKTLLRKCKIRPLIRGFQL FQRESPLIHMLQMFELCYDYKSYQRAEEKLLEFQKCLLNLRSSGSVLGLECLPVQWVESQ ASVLLLTLMQQCETQYELRRLLQLLANMERLLKSNGPDFKKLSQLSQILAETPVCLSSCL LEDYTPESLQGECQSMLEELQELGLFSQARRVAELAGLPIDRLIVNELLRDLEVQKAKRH WERQDTRLAFWKRCHDLFKTDSIGAEAACQFFLSQAEDPLKKDTELLHVQERCLLLGLAG HWLSQCRSSSTAHRLSQLEKQQWQCRVRRLVLTTALEQESLFAPASVVVEDSFDCLLREY SFSKMAILNSPTYLNLEGLPTSEESCPLVGEEQKALTTLVGQLLDDGSVHEASRVCGYFE LYHRDLKLVLQCRGLACGELQPGLQELLSPNVESRSLPSCSSTSSLSSFVVVSSPEDQVL SQLQLLVEQCRHGKSYCKQVLSLYELSKELHCSYGEISSEEPEAVLRKVLLSQQPERYKK AQAFISVQGLQPDTVAQLISSTVLEGLLASSQDETAERNIYSPSEGREAFLQLAKLCGDP NLVGSKLLDSIPTVPLAELGCTVELLILAHDCFSLTCNMEGIVKVLQAARHLSHKHLAHG EGYGLLVRLLTGIGRYNEMTYVFDLVNQNHRFEMLLRKKVESNTRLKTALLDYLKRCLPG DSEKHNMVALCFSMRREIGENHEGAARTQLKLIESQPWAVTPELKSGLEKVLFLLKDAVE SYSKDSCMRQALRCVKLAKLITLQLHFLNHGQDHRVVNLRPPELLNAIVALPRCYQAFVV AEAYDYSPDWAEVLYQKVILKGDFSYLEEYKQHRQLSANLFDEISKKLLKNKPPNSASQN LKKLLQHCEDVYTHYELAYNHKFIDVANMLLQDSKTNSYLSDRLKT NT seq 7161 nt NT seq  +upstreamnt  +downstreamnt atgttaagcaggcctgaagctcgagtgcagaaagctctagaagtcgcacttctgcctgaa aacgacttgtgtaaagatgttcacaacacggtcaaagccaaaatggctaaaggctgctct ctgctgtgctgcctgaatgctgggggtaagctggcagtcagtgatgtgtctgagagagga ggtcctgtgcatgttctcgaggactcacacacagactttttctgggaggtgttgacagag cgaggtaaaactgatggcagccctcgactcctgactgtgggacctgcatgtgaactcaga ctgcatgaggtggatccagaaatccctccctctcttctgtttgaatatccagcacacaga ctgctccagctccccaaagaaaaggactccagagtgaatgaactggtcagtgccaagctg ctgtcattctccgatggccgatgtttcctgctgctgaacatggcagttctggtacagctc ctctatgtggagggttctgtagaaccagaggctgtgtcttcttgccttatcaacttacca cctgaaattcgggaaacatttgtcgactaccagctctgtagaagcacactgtttgtgctg accagcactggattcatttatgtgtttgacagtgttgaggggaagcacctggccactgtc aatctccctgaatactatgcatcaagacagagagaggcagaatctgtcacgcctctttcc tccttctgtcttctgcacatttcccaagacctcagcatggctgtagcagccacaagtcaa aaccaagcactggccctggacctcaatgattatttcagaattcatacagatcagctgctt tgtcagcagtctcccaccctcccccctctcatccccacaaagccctgtgaccaggacagc atcagcagtgtggctcacagtcagtctgtactgggcatcaacttccaaacagaccactcc tgggaagcgaggttaaagcttctctataaaaaagctaaagctactgaaccaccagccctc cggctgccctggtatggagacgtccccaactcggagtgccgtcgaatggctgccactgcc aatctcggtcaaccctgtgcaccaccagggggcatcctgacttccttcactgtacctgaa caaaccacaccaaccatgctgaatgtctcagaattctcggtagtgcttaccttcacctca gcgggcaacagcagcaccatgctggctcactgggatctggagagtcagagtgtgacgtat cactgcgctgatgctcctgctgcacctgttcggcgctcagaggaggaacacctctctcta atattgaaagaatcaggcttgtctctggtgctgttcacggtttctcaggaggagctgtta aacagattgatggtgtttggcagtgctggtgtagtggactctctctgccatctaaatgac tgggggcgctgctctatgcctatccatgccctgcaggctgggctgaagaataggcaactg gacatggtggatttctttttgaagagcaaagagaatattctgtgtccacctacaggctac ggtgtgcttgagcagtcccctgccaacacaacacagatgcagctaaagaatgcccaggat ctgtgtccagccctggatcttcttcactctgcaatcagagacacatatgctgaagctcag agtcaacagttctgtgaacagctgcttaacattacactcaacttccttaatacacagatc cgagtcctcctcagcagcgcaccagagttggatgctaacttgcaggagtgtgtgaagatc ttgagtggctatatctctgaactgcgcacctatttaaggaaatacccctggttggtaggc ggcgatcagactcctgcccctaaacaaccacctgacatgaccatggaggaattgtgggaa tcactgtctgtggaggatgtggtcaagcaggcaattttgtgcagcgagatcccgcgtgca caggcgtatctgcgcaaacacagctgtcctgagcagaagctggaagagctaaggagaaca ggcctgagactggcctttaactgccttacacacagagacctgcagcaggccactacactg ctcactaatatgggttttaatgtgaaagaacagcttcacagtatctgtgtgtacacagcc gatcgagacctcagggcatatatggtggaagaattgaagaggcagaatcacctctcttct gaggagatggagaaagtggagttcattaaacagattgagaatttgtgctcagcgccagca gcaagatgtttaaaggctgttgacaagaacagagttcttcaaataagccaatcagaggtg gagaaccgggcattgctgcaggagatgcacggaccactatcttcctccttccagtccctg ctgggatctgtgcgtttggactgggttagacactgggataacaacacacagaaaactgtg ctcctctccagacttccagagcccttgttgggctcctgtgatccagctgtgctgtggtca tacctcacctcccttcatgaccagacccgcaacactgcatggctcaccagcatggcagcg caggacagagagaacactgctgccccccagtggcctgctctcactgcagatattgtgaat ggaaacacctgctgcagtggctacatgagagaccaaatcctcgacatgctcgccaggcaa gaggtgtttgtgcagtcagagatttctgattttgagcagttgttgtggaggctgggtcag gctggaggggtaatgaggggtaacagcggccctcctgtcccacagttcagtgcagcccaa ggccaggacttccatacacactttattcagcactgtctggagaacagtttacactacctg ctctatacctacctggagcactacaggctgacacccagtaattgccctgctgttggggac agaggtttgtatgagatttatccctggtttgagatgatggtcaaactgcagaggattaca agagacctcacagacccagagcgagtgttccaggccagtctgaccagtgcacaggtgctt ttgccaggcagtcaggctagtgttagcagcatgctgctagagggacatagcctccttgca ctctccaccataatgtttggaccaggaggtattgatcaggtggtgaaagagggtgagaaa ggtcaggacgctctgtgcagagtcgacccacagctcctgaggatggctctgagtccttac cccaaactcaaagctgctcttttcccccacagtggctcaagagcctcttcagcttgtgat atatccatttaccaactcatgcagtgtttgcaccccttggatccctccagactgtttggg tggcagtctgccaacaccttaggcagcgccgaaacgtccactgagcttccccatttctcc agccctcacctggtcaacaagtacgctctcattgaaaacctggacttcttgtactacctg cagcacggcagaccttcttttgcctatggaattgtcattattcagcatctggctaactcc aacaatatgaagctgcagattagtctggctgtggagcaggcatacactctgggtcttctg aatttcagctctccatctgtagcagcagcttgtgtgtgtttctgtgagctgttgggtgtt tgcagtctgaaactgagggttgacctcaaagccctcaatctcatcctcaagctctggagt cagaactgtgaggagagcagcttagcctcactcagacagtctctggtggagaaggtgaat aagctggtagcagctgagaggaagactgctgaagaactgctgctacatctggaaggagca gtgagggacaacgtggaaaggagatgcattagcaggtcatcgtatgaggcgggacaggag tgggctcttcctgtccagttctgccacctgcatgatctgccccttagtgctggctatcta cgagactgtgccagtgatggccagtggcttaacttcctgctgtttgtgcagcttcaccag taccctccacagcaggtcagatcactggtgactagcttcactccagccctgcaggcccac cttttcctggccttccaggatcttcaggtcatcagacctcagggagccatggaggtccag ggggattctctcccccctctgccaatggaggaaagctctgaagcacctaaagatctgttc caggtgctgttagagagccaggagaagaccagcccctggagacatctgctgactgaagct gtggagcagcacagtcctccacttacagtgctggcagcatgtaaccaggatgctgagctc ttgcagtgcttgtgtgtgtggatcctgacctcagtcgatgaagaagttgcccaggaggcc acctcacacatcaatgagaatccaggccatcacacatggaaccttcatgacctgtcagtc ttatggaaaactctcctccgcaagtgcaagatcagacctctgatccgtggcttccagctc ttccagcgggagtctccactgatccacatgctgcagatgttcgagctatgctatgactat aaaagctaccagcgtgccgaagagaagctactggagttccagaagtgtctacttaatttg aggagcagtgggagtgtgctgggtctggagtgtctgccggtgcagtgggtggagtctcag gcctcagttctgctgctcacactcatgcagcagtgtgagacacagtatgaactgcgcagg ctgctgcagctgctggccaacatggagcgtctgctcaagtcgaatggtcctgattttaag aagctgagtcagttgagccagatcctggcagagactcctgtgtgtctgtcctcctgcctg ctggaggactatacccctgagagcctgcagggggagtgccaaagcatgctggaggagctg caggagctggggctcttctcccaggccaggagagtggctgaactggcagggctgcctata gaccgcctgattgttaatgagctactgcgggacttggaggtgcagaaggccaagcgccat tgggagaggcaggatacccgactggccttctggaaaagatgccacgatctgttcaagacc gacagcattggggcagaagcagcctgccagttctttctctctcaggctgaggatcctttg aagaaggatacagagcttcttcatgtgcaagaacgctgcctcttgctgggtttggctggt cactggctttcccagtgcagatcctcctctactgcacaccgcttgtctcagctggagaag cagcagtggcagtgccgtgtccgccggctggtcctgaccactgcgctggagcaagagagc ctgtttgctccagcctctgtggtggtggaagactcctttgactgcctccttagagaatac tccttctccaaaatggccattctgaacagcccaacatatttaaacctggagggacttcca acttctgaggagagctgccccctagtaggagaagaacagaaagctttgaccactctagta ggccagcttttggacgatgggagtgttcatgaagcgagccgtgtgtgtggatactttgag ctgtaccacagggatttgaagctggtgctgcagtgtcggggcttggcttgtggagagctg cagccaggcctgcaggaacttctcagccccaacgtagagagcaggagtctccccagttgc tctagcaccagtagtctgtcctcctttgtggtggtttcctcccctgaagaccaggtcctc tctcagctccagctgctcgttgaacagtgccgccatggcaagagctactgcaagcaggtc ctcagcctctacgagctctccaaggagctgcattgctcttatggtgagatatcatctgaa gagccagaggcagttcttcggaaagtgctcctgtcccagcagccggaacgctataagaaa gcccaggcctttatcagtgtccagggattacagccagacactgtagcccaactcatatcc tccactgtgctggaaggactactggcttcttcacaggatgagacggcagagcgtaatata tacagtccatctgaaggtagagaagccttcctgcagctggccaaactgtgtggcgacccc aacctggtgggcagcaagttgttggacagcatccccactgtccctctggctgaactgggc tgcactgtcgagttgctgatcttggcccatgactgcttcagtctcacttgtaatatggag ggtatcgtcaaggtccttcaagctgccaggcacctcagccataaacacctggcacatggg gagggatacggactcctggtgcgacttctgactggtattggaagatacaatgaaatgact tatgtctttgatcttgtcaaccaaaatcaccgttttgagatgctgctgaggaagaaagta gagtcgaacaccagattaaagactgctttgctggactaccttaagcgctgtttaccaggg gacagtgagaaacacaacatggtagctctatgtttcagcatgcgcagagagatcggggag aaccatgaaggagctgctcggactcaactcaaactcatcgagtcacagccttgggccgtc accccggagctcaaaagtggtctggagaaagttctctttttgctgaaagatgctgtggaa agttactctaaggactcgtgcatgcgacaagctctgcgatgtgtgaaactggctaaactc atcaccctgcagcttcactttcttaatcatggacaggaccaccgtgttgttaacctgaga ccaccagaactactcaatgctattgtggctctgccacgctgttaccaggcatttgtagta gcagaggcgtacgattacagtcctgactgggcagaggttctgtatcaaaaagtgattctg aaaggagatttctcttacctggaggagtataagcagcacagacaactttcagccaatctg tttgatgagatctccaaaaaactgttaaaaaacaagcccccaaacagtgccagtcagaac ctgaagaaactcctccagcactgtgaagatgtctacacccactacgaactagcctacaat cataagtttatcgatgtggccaacatgcttctgcaggactctaaaacaaacagttatctt agtgacagactaaaaacctaa

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