Astyanax mexicanus (Mexican tetra): 103033462
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Entry
103033462 CDS
T05042
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 12-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
amex04054
]
103033462
Pattern recognition receptors [BR:
amex04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
103033462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FISNA
NLRC4_HD2
PRY
NOD2_WH
LRR_6
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
103033462
NCBI-ProteinID:
XP_049336263
Ensembl:
ENSAMXG00000000490
LinkDB
All DBs
Position
6:56729771..56740916
Genome browser
AA seq
1098 aa
AA seq
DB search
MKRAESPESRSVSIKTVQSMSEPISSSGGGASDSSRTEAETAASSGSSCVSMKSDWSLSH
PPDLSDGPEPSDQRKVFTEAALQENILCMGTRDQQQNSSQPMDELLHRVSTRHKTSLKNK
YENLFEGIKAPENRTLLNRIYTQLYIIEGESEGVNKEHEVLQMEETQRKSLQDSPINCLD
IFKPVQAPKEGSEEENIRGVIAEDVRHKERKGNKEPKVQKVRTVLTKGIAGIGKTVSVQK
FILDWAEKKANQDVDFMFVLQFRELNLIKDDQYSLHELLCVFHPELKDLDPKIYDVCKAV
FIFDGLDESRTSLEFEECEKVSDVSLTSSVSVLMTNLIKGDLLPSAHIWITSRPAAANQI
PPQFINRVTEIQGFTDPQKEEYFRKRISDQDQAQKIISHIKTARSLHIMCHIPVFCWISS
TVLQRIMDQDSDTEIPKTLTEMYSHFLLTQINMKKEKYEEKDERDTQKLLESNRTMLLKL
AELAFNQLMKGNVMFYEDDLLDSGIDITEASVHSGIFTEIFREECVIYQRKVYSFVHLSF
QEFLAALYVLHCYQNQNTKVLEVFKAWCLQWSENVKLEELLCGAVHNAVHSKNGHLDLFL
RFLLGISLEANQRILQGLLTPTHTNLEKTIEYINKVIKNYHGLSMDRSINLLLSLSEIKD
QSVSREIQEYLKSEKVSQVKLSPGQCTALANMILISEEVLDELDLKQYNTFKKGHSRLVP
AVSVCRKALLADSNLTEESCKIISFALQSVNTPLKYLDLSNNDLQDSGVELLSAGLKSSH
CKLQTLRLALCNLNEKTCEILASILQSVNASLEDLDLSNNDLQDLGVELLSAGLKSSHCK
LQILRLSGCMVTEEGCSSLASALKINPFHMRELDLTYNYPGETGVKLLSDLVLDPHCKLE
TLRMEHGGKSRMKTGLRKYACYLTLDPKTAHARLFLSEGNRKVKSVDEDLPYPDHPDRFK
FCEQVLSVESLTGRCYWEVEWGGNRADIGVSYRGISRTGGSECWFGNNKLSWSLLCWGDR
DFSHYVRHNTSYHSVGSPPLWSRRVGVYLDHPDGALSFYSVSPDTDTLTRFHTFRTTFTE
PLYAGLRVYHHLSVCEIE
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgtgcagaatctccagagtccagatctgtgtccataaagacggtccaatccatg
tctgaaccaatcagctccagtggaggaggagcttctgactcaagcaggactgaagctgaa
acagcagcttcttcaggatcaagctgtgtgtctatgaagagtgactggtctttatctcat
cctcctgatcttagcgatggacctgaaccttctgatcaaagaaaggtattcacagaagca
gcactgcaggagaacatactgtgcatgggaactagagaccagcagcagaactcttcccaa
cctatggatgaacttctgcacagagtctcaacgagacacaaaaccagcctgaagaacaag
tatgagaacttatttgagggaatcaaagctccagagaacagaaccctcctgaacaggatt
tacactcagctctacatcatagagggagagagtgaaggggtgaataaagaacatgaggtt
ctacagatggaggaaacacaaaggaaatccttacaggactctccaatcaactgcctagat
atatttaaacctgtacaagctcctaaagaaggatcagaagaagaaaacattagaggagtg
atagctgaagatgttaggcacaaagaaagaaaaggaaataaagaaccaaaagttcagaag
gtcagaacagtgctgactaaaggcatcgctggaattggaaaaactgtctctgttcagaag
ttcattctggactgggctgaaaaaaaggccaatcaggatgtagatttcatgtttgttctt
cagttccgggagctgaacttgattaaagatgatcagtacagtcttcatgaacttctgtgt
gtctttcatcctgagctcaaagatctggatccaaagatctatgatgtgtgtaaagctgtg
tttatatttgatggtctggatgaaagcagaacttcgctggagtttgaagagtgtgagaaa
gtgtctgatgtatccttgacatcatcagtgagtgttttaatgacaaacttgatcaaagga
gatcttcttccctctgcccacatctggatcacctcccgaccagcagcagccaatcaaatt
cctcctcagttcatcaaccgtgtgacagaaattcaggggtttactgacccacaaaaggag
gagtacttcaggaagaggatcagtgaccaagaccaagcccagaaaatcatctcccacatt
aaaacagcgaggagcctccacatcatgtgccacattcccgtcttctgctggatctcatcc
actgtgctccagagaatcatggatcaagacagtgatacagaaatccctaaaactctgact
gaaatgtactcccacttcctgctcactcagatcaacatgaagaaggagaagtatgaggag
aaagatgagagagacacacagaaactgctggaatccaacagaaccatgcttctgaaactg
gctgaactggcgttcaatcagctgatgaagggcaatgtgatgttctatgaggacgaccta
ttggacagcggcattgacatcactgaggcctcagtgcattctgggattttcactgagatc
ttccgggaggaatgtgtgatttaccagcgaaaggtctacagctttgttcatctgagcttc
caggagttcctggcagctctctatgtgcttcactgctaccagaaccagaacacgaaagta
ctggaggtctttaaagcatggtgcctacagtggtctgagaatgtaaaactggaggagctg
ctgtgtggagctgtgcataatgctgtgcacagtaaaaatggtcatctggatcttttcctc
cgtttcctgctgggaatctcactggaggccaatcagagaatcctacagggtctactgaca
cccacacacaccaacttagagaaaaccatagaatacattaataaagtaatcaaaaactat
catggcctttcaatggacagatccataaacttgctcctctctctgtctgaaattaaggat
cagtctgtctcgagagagattcaggagtatctaaaatcagagaaagtttcacaagtgaag
ctctctcctggacagtgtacagcactagccaatatgattctgatctcagaggaggttctg
gatgaactggacctaaagcagtacaacacattcaaaaagggtcacagcagactggttcca
gcagtgagtgtctgcagaaaagccttactagctgactctaatctcactgaggaatcctgt
aaaattatctcatttgctctacaatcagtaaacacccctctgaaatatctggatctcagt
aacaatgacttacaggattcaggtgtggagctgctctctgctggactgaagagttcacac
tgtaaactgcaaacactcaggctagctttgtgtaatcttaacgaaaaaacttgtgaaata
ctggcatcaattctacaatcggtaaatgcctctctggaagatttggatctcagtaataat
gacctgcaggatttaggagtggagctactctctgctggactgaagagttcacactgtaaa
ctgcagattctcagattgtctggttgtatggttacagaagaaggctgttcttctctggct
tcagctctgaaaataaacccctttcacatgagagaactggatctgacctataattatcca
ggagagactggagtgaagctgctctctgatttagtgctggatccacattgtaaactggaa
acactcaggatggaacatggagggaagagtaggatgaaaacaggattaaggaaatatgcc
tgttatctcactctggacccaaaaactgcacatgctcgtctgtttctgtctgaggggaac
aggaaggtgaagtctgtggatgaagatctgccgtatccggatcatccggacaggtttaag
ttctgtgagcaggttctgagtgtggagagtctgactggacgctgttactgggaggttgag
tggggtggtaacagggctgatattggagtttcctacagaggaatcagcaggacaggtgga
tcagagtgctggtttggaaacaataaactgtcctggagtctgctctgctggggcgatcgt
gatttcagtcactacgtccgacacaatacttcatatcattcagtaggttcccctcccctc
tggtcccgcagagtgggggtttatctggaccatccggacggtgctctgtccttctacagc
gtctcacctgataccgacacactcactcgcttccacacattcagaaccaccttcactgag
ccgctctacgccgggttaagagtttatcatcacttatcagtgtgtgagatagaatag
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integrated database retrieval system
