KEGG   Astyanax mexicanus (Mexican tetra): 103033595
Entry
103033595         CDS       T05042                                 
Symbol
per1b
Name
(RefSeq) period circadian protein homolog 1b
  KO
K21944  period circadian protein 1
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amex03400]
    103033595 (per1b)
DNA repair and recombination proteins [BR:amex03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    103033595 (per1b)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_3 PAS_11 PAS
Other DBs
NCBI-GeneID: 103033595
NCBI-ProteinID: XP_007242118
Ensembl: ENSAMXG00000018625
LinkDB
Position
8:complement(21116489..21153237)
AA seq 1429 aa
MSDDNSDSAPSNGTRGGVGRAEEDEEAGQQNSSLGMSSVCPSSQPSNGRTGSSPGADSGP
TGSSGDNRGPHSDDMDALSSGNDSGERESEGGLERENGSRGRQSMRSYQSSSSQNGKDSG
MMLETTESNKSSNSHSPSPPSSSLAYSLLSASSEQDHPSTSGCSSNQSARVQTQKELMRA
LKELKIRLPAERKTKGRSSTLNALKYALSCVKQVRANQEYYHQWNVEECHGCSLDLSTFT
IEELDNITSEYTLKNTDTFSMAVSFLSGKVVYISPQGSSLLRSKPEKLQGTVFSELLAPQ
DVSTFYSSTAPCRLPSWASCIGSAPPVDCTQEKSMFCRISGDSSTSGHMRYYPFRLTPYL
LTLRDSDTADAQPCCLLIAERVHSGYEAPRIPPDKRIFTTSHTPSCLFQEVDERAVPLLG
YLPQDLVGTPVLLYLHPEDRPIMVAIHKKILQFAGQPFDHSPLRMCARSGEYLTIDTSWS
SFVNPWSRKVAFIVGRHKVRTSPLNEDVFTLPRDLEERTLAPDIIQLSEQIHRLLVQPVH
SGSSQGYSSLTSNGSHEHQPSAASSSESNGTALEDPAQLHKPMTFQQICKDVHMVKTSGQ
QVFIESRNRPPPRKHTATGSLRAIGNAGPGVAPPSKNTVPSQLVRKDLSPTYSYQQINSL
DSIIRYLESCNVPNTVKRKCGSSSCTASSTSDDDKQQDAPGNAKGPSVALVGESTALPGL
TLHSKAESVASVTSQCSFSSTIVHVGDKKPPESDIVMEEAPMTPVPARPVPQPPAPPPIT
AVPSLPPPPTPQSPAPTAEKDGGRRGAGGAGGRLGLTKEVLSAHTQQEEQNFLCRFKDLS
QLRVFDPPSALKRHTTAPFTKGVRCSRDYPAIGSTGRRRGRGGKRLKHQETSEQGSSLGL
AGPSRGLSTGAPAHEGVPNPSFPLGPPTTSSSWPPSVGSQNSLPSVPYPPGMLPLYPLYP
PLSQPVADPSMQPGLRFPIQTPQIAPPMVPPMMALVLPNYMFPQMGTSLAQPGPTPMPQP
FYNPNLAFPYPAASATLPPAVPQTAMPAPPNQSRCSSPQSCSQREGGADREGAESPLFQS
RCSSPLNLLQLEESPTNRLEVASALASGQQPTTPAGGQGGGTGAQASTNQRGPAEDGKEN
EHGEANESNQDAMSTSSDLLDLLLQEDSRSGTGSAASGSGSSGTRSSGSGSGSSGSGSNG
CSSSGSGTRSSQSSHTSKYFGSIDSSENDHSRKQTAGGDGEAQFIKCVLQDPIWLLMADT
DEKVMMTYQLPIRDRETVLHEDRIALRAMQKHQPRFTDEQKRELSQVHPWIRTGRLPRAI
NISTCTGCKSPPSVPPTAPFDVEIHEMELCSVLEVTDEGTMADKHTQPDTAMEEGEAVEA
GQWREEEENERETVGMTTQISDQEMTAEDQDITSQMREEKVGSVTEMSH
NT seq 4290 nt   +upstreamnt  +downstreamnt
atgagtgatgacaactcggactccgctcccagcaatggcactcggggaggagtgggcagg
gcagaagaggatgaggaggcgggacaacagaacagttcacttggaatgagcagtgtctgc
ccctcatcccaaccaagcaatggcaggacaggatcgtcgccaggggccgactcaggaccc
acaggttcgtcaggggacaaccgggggccacattcagacgatatggatgcactgtccagc
ggcaacgactctggagagagggagagcgaaggagggctggagagggagaacggttccaga
ggaagacaatctatgaggagttatcaaagctcctccagtcaaaatggcaaagactcggga
atgatgctggagaccacagagagcaacaagagttcaaactcgcacagcccctcacccccg
agcagctctctggcgtacagtctactgagcgctagctcagagcaggaccacccctcaacc
agcggctgcagcagtaatcagtcagctcgagtgcagacacagaaagaactgatgcgggcg
ctaaaggaactcaagatccgcctgcctgcagaaagaaagaccaagggccgatccagtaca
ctcaacgccctcaaatacgccctcagctgcgtcaagcaagtccgagccaatcaggaatat
tatcaccagtggaatgtggaagagtgccatggctgcagtttagatctctccacctttacc
atcgaggaacttgataacatcacctctgagtacacgctgaaaaacacagacacgttctcc
atggccgtgtcattcttgtcgggaaaggtggtgtacatctctccccagggttcatctttg
ttacgcagcaaaccagagaagctgcaggggactgtgttttcagagctactcgcccctcag
gacgtcagcactttctacagcagcactgccccctgtagattaccatcgtgggcttcctgc
attggctcggcccctccagtggactgtactcaggagaagtccatgttctgtaggatcagt
ggagatagctcaacaagtggacatatgaggtattacccattcagactgactccctacctg
cttactctgcgagattcagacacagcagatgcacagccctgctgtctgctcatcgcagag
agagttcactcgggatatgaagctcctcgtattcctccagataagcggatcttcaccacc
agtcatactcccagctgcctgttccaggaggtggatgagcgggcagtgccacttctaggc
tatctgcctcaggacctggtgggaactccagtcttgctctatctccaccctgaggacaga
cccataatggtggccatccacaagaaaattcttcagtttgcagggcagccctttgaccac
tctccgttgcggatgtgcgcccgcagtggagagtatctgaccatagacacttcttggtcc
tccttcgtcaacccatggagtagaaaggttgctttcattgtgggacgccacaaagtccga
acttctccactgaatgaggatgtgttcactctgccgcgagacctggaggagcgcactctg
gctccagacatcattcagctaagcgagcagatccaccggctactggtgcagcctgttcac
agcggcagctcccagggatacagcagcctgaccagcaacggctctcatgaacatcagccc
agcgcagcttcttcgtctgaaagcaatggcactgctctggaggacccggctcagctccac
aaaccgatgaccttccagcagatctgtaaggacgttcatatggtgaagaccagtggccaa
caagtgtttatcgagtcccgcaaccggcctcctcccaggaaacacactgctacaggttct
ttacgggcaatagggaacgctggaccaggtgttgctcctccttctaagaatacagtgccc
tcccagcttgtgagaaaggacttatcacctacatactcttaccagcaaatcaacagcctg
gatagcattatacggtatctggagagctgtaacgttcctaacacagtaaagaggaagtgc
ggctcatcttcctgcacagcctcctctacgtctgatgatgacaagcagcaggacgctcct
ggcaatgctaaaggtccatcagtggctctggttggtgagagtacagcattgcctggtctt
acattgcacagtaaagcggaaagtgtagcatcagtcacttcccagtgcagttttagcagc
accatcgtccatgtgggagacaagaagccccctgagtcagacatagtaatggaggaagct
cctatgactcctgttcctgctcgtccggttcctcagccccctgctccacctcccatcact
gctgtcccatctctgcctccacccccaactccacagagtcctgcacctacagctgagaag
gatggaggcaggaggggtgcagggggagctgggggaaggctgggactgacgaaggaggtg
ctttcagcacacactcagcaggaggagcagaacttcttgtgtcgatttaaagacctgagt
cagcttcgagtcttcgacccgccttcagcgctcaagcggcatactaccgcaccgtttact
aaaggtgtgcgctgttcccgtgattaccctgcaataggaagcactggtcgaaggcgtggt
agaggcggcaagagactgaaacaccaagagacctcagagcagggaagctctttaggtctt
gcaggtccatccagaggcctctctactggagctcctgcacacgaaggagtcccgaacccc
tctttccccctgggcccaccaaccacctcatcctcctggcctccttcagtgggctcccag
aacagcctcccctctgtgccctacccaccaggcatgctccccctgtaccctctttaccca
cccctctctcagccagtcgcagacccatccatgcagcctggccttcgcttccccattcag
actccacagattgcacctccaatggttccccccatgatggcactggtactgcccaactat
atgttcccacaaatgggcacttccttagcccagcctggccccacacccatgccccagccc
ttctacaacccaaacctggcatttccatatccagcagccagcgccaccctccctccagct
gtccctcaaacagccatgccagccccaccaaaccaatcccgctgcagcagcccccagtcc
tgcagccagagagagggaggggctgatagagaaggggcagagtcacccctcttccagtcc
agatgctcctcccctctcaatttgctgcagctggaggaatcacccaccaatcgattagag
gtcgcttcagctctggcctcaggacagcagcctacgactcctgcgggaggacaaggtggc
gggactggagcccaggcctcaaccaatcagagaggtccagcagaagacggcaaagagaat
gaacatggggaagccaatgagtcaaaccaggatgccatgtccacttccagcgacctgctg
gaccttctgctgcaggaggactctcgctctggcaccggctcagctgcttcaggctctggc
tcctctggaaccaggtcctcgggctctggctcaggctcatccggatctggctccaatggg
tgcagctcatctgggagtggaactagaagcagtcagagcagccacaccagcaagtacttc
ggcagcatagactcatcagagaatgaccactctcggaagcagacagcagggggcgatgga
gaggcacagtttatcaagtgtgttctgcaggaccccatctggctgctcatggctgacaca
gatgaaaaggtcatgatgacctatcagctaccgatcagagatcgagagactgtgctgcat
gaggaccgaatagctttgagggccatgcagaagcaccagccccgttttactgatgagcag
aagcgggagctgagccaggtgcacccctggatccgcacaggacggctgccacgtgccata
aacatatctacatgtacgggctgcaagtctcctccttcagttccacccaccgcccccttc
gatgtggagatccatgagatggagctgtgcagtgtgctggaggtgacggatgagggcacc
atggctgataaacacacccagcccgacacagccatggaggagggagaggcggtggaggcg
gggcagtggagagaggaagaagagaacgagagagagacggtgggaatgacgacacaaatc
agcgaccaagaaatgacagcagaggatcaggacattacctcacaaatgagggaggagaaa
gtgggcagtgtgactgaaatgagccactga

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