Astyanax mexicanus (Mexican tetra): 103033637
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Entry
103033637 CDS
T05042
Symbol
dkc1
Name
(RefSeq) H/ACA ribonucleoprotein complex subunit DKC1
KO
K11131
H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103033637 (dkc1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amex03009
]
103033637 (dkc1)
03032 DNA replication proteins [BR:
amex03032
]
103033637 (dkc1)
Ribosome biogenesis [BR:
amex03009
]
Eukaryotic type
Sno RNPs
Box H/ACA snoRNPs
103033637 (dkc1)
Prokaryotic type
103033637 (dkc1)
DNA replication proteins [BR:
amex03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
Dyskerin complex
103033637 (dkc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DKCLD
TruB_C_2
TruB_N
PUA
PUA_elF2D
UPF0113
Pus10_C
DUF908
Motif
Other DBs
NCBI-GeneID:
103033637
NCBI-ProteinID:
XP_049322203
Ensembl:
ENSAMXG00000017108
LinkDB
All DBs
Position
17:18999005..19009837
Genome browser
AA seq
519 aa
AA seq
DB search
MADGEIGSAKKEKKKKSKISNDEIGEIQETGDFLIKPESKVAKLDTSQWPLLLKNFDKLN
IRTAHYTPLPHGSNPLKRNIHDYVRSGFINLDKPANPSSHEVVAWIKRILRVEKTGHSGT
LDPKVTGCLIVCVDRATRLVKSQQSAGKEYVGIVRLHNAIENEHQLARALECLTGALFQR
PPLIAAVKRQLRVRTIYESKLIEYDPERRLGIFWVSCEAGTYIRTLCVHLGLLLGVGGQM
QELRRVRSGVLGEKDCMVTMHDVLDAQWQFDHNKDETYLRRVIYPLEKLLISHKRIVMKD
SAVNAICYGAKIMLPGVLRYEDGIEMNQDIVVITTKGEAICTAVALMTTAVISTCDHGVV
AKIKRVIMERDTYPRKWGLGPKASQKKMMIQKGLLDKHGKPNGSTPAEWKEGYVDYSKTK
TPAAAEESQPGAKRKRDESGSEGEAAAAPSTPKTDEELKKEKKKKKKEKKLKLAAEAAEA
AEAIEETPAAEEEAEVTESAKKKKKKKKSKEAEAEAGSD
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggagaaattggatcagctaagaaggagaagaagaagaagtcaaagatttcc
aatgatgaaattggggagatccaagaaactggcgatttcctcattaaacctgaatccaaa
gttgccaagcttgacacctctcaatggcctttactattgaagaacttcgacaagctgaac
ataaggacggcacattacacacctctgccacacggctcaaacccactgaagagaaacatt
cacgattatgtccggtctggctttattaatctggacaaaccagctaacccttcctctcat
gaagtggttgcctggatcaaacgaatcctgcgtgtggagaagaccggccacagcggcacc
ctggacccgaaggtcacaggctgcctgattgtgtgtgttgaccgagccacacgacttgtc
aagtctcaacagagcgctggcaaagagtatgtgggaatagtacggctgcacaatgcaata
gaaaatgagcatcagcttgcaagggctttggaatgccttactggagctctcttccagagg
cctcctctcatagctgcagtgaagcgacagctccgagttaggaccatctatgaaagcaag
ctgattgagtatgacccggagagacgacttggtattttctgggtaagctgtgaggcaggc
acctatatcagaacgctgtgtgttcaccttggtctgctgctgggagtgggtggccagatg
caggagctcaggagggttcgctctggagtgttgggtgagaaggactgcatggtgaccatg
catgatgttttagatgcccagtggcagtttgaccacaacaaagatgagacctacctgagg
agagtcatctatcctttggagaagctgctcattagtcacaagagaattgtgatgaaggac
agtgcagtgaatgctatctgctatggtgctaagatcatgttgccaggtgttttacggtat
gaagatggcattgagatgaaccaagacattgttgtcattacaactaaaggagaggcaatt
tgtacagcggtagctctgatgacaactgcggtcatctctacatgtgaccacggtgtggta
gccaaaatcaagagggtcatcatggaaagagacacttacccacgcaaatggggactgggg
ccaaaggccagtcagaagaaaatgatgatccagaaaggcctactggataagcacggcaag
ccaaatggcagcaccccagcagagtggaaggagggctatgtagactacagtaaaaccaag
actcccgcagcagctgaagaatctcaaccaggagcaaagaggaaacgggatgagagtgga
agcgagggtgaagctgctgctgctccttcaacacccaagacagacgaggagctcaagaaa
gagaagaagaaaaagaagaaagagaagaaactgaagctggcggcagaagctgcagaggca
gctgaagctattgaggaaacgccagctgcagaggaggaagctgaggtcacagaaagtgct
aagaagaagaaaaagaaaaagaagtcgaaagaggcagaggcagaggctggttcagactga
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