Astyanax mexicanus (Mexican tetra): 103033742
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Entry
103033742 CDS
T05042
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like
KO
K14571
ribosome biogenesis ATPase
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103033742 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amex03009
]
103033742 (nvl)
Ribosome biogenesis [BR:
amex03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
103033742 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Nucleolin_bd
AAA_lid_3
RuvB_N
AAA_16
AAA_2
AAA_5
AAA_22
AAA_14
AAA_33
TIP49
NPHP3_N
RNA_helicase
Mg_chelatase
AAA_28
AAA_17
nSTAND3
Vps4_C
AAA_18
ABC_tran
Viral_helicase1
TsaE
Rad17
Zeta_toxin
AAA_3
IstB_IS21
Cytidylate_kin2
NACHT
Sigma54_activ_2
Motif
Other DBs
NCBI-GeneID:
103033742
NCBI-ProteinID:
XP_007253246
Ensembl:
ENSAMXG00000009228
UniProt:
A0A8B9KZL5
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All DBs
Position
25:complement(25597929..25619320)
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AA seq
922 aa
AA seq
DB search
MKNRGGGGGGGGGFVDQRLKQRVEQYLKSKNSQYVDIAEMAADLQRQYRMEYGRRNRIAF
RIQVEKVHGVLCSESGLSSLEDRHLAKRARRSQEDEGDDSSVLEDSSDSEEDISEPENAN
HMNSSLISLYRKGDPENGTPSEEKSTDSPAPASAQKPASGDSAAAAAASSTPHRSATVVG
RGGWFIDKTGKKDKENIMIDLCEEEPASPAKQPDLYLLEPEKKTKKSTKKGKRKTRREGG
GEGKDVDADIEASIMSKKARTKAPELQHSTVKFEDVGGNEETLTELCKLLIHMRHPEVYQ
QLGVVPPRGFLLHGPPGCGKTLLAQAVAGEMELPMLKVSAPELVSGVSGESEQKLRELFD
QAVSNAPCILFIDEIDAITPKREVASKDMERRIVAQLLTCMDDLNSLSVPAQVLVIGATN
RPDSLDPALRRAGRFDREICLGIPDEGTRLRILQTLCRKLRLPVDFDFRQLARLTPGYVG
ADLMALCREAAMSAVNRVLLQRLETPDPPAANDMEVSTHLPEPQDPETQNQPTGTDPPTD
QSTTDHSQQDASPEQCQEMSVSTSVVEDGESIAASEPLMTQQGELVQLLSLLKRSESLSE
EQLAGLCILMDDFKASLASVQPSAKREGFATVPDVTWDDIGALQDIREELTMAILAPVRS
PEQFKALGLSAPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAV
RQVFQRGRNSAPCVIFFDEIDALCPRRSGHESGASVRVVNQLLTEMDGLETRRQVFIMAA
TNRPDIIDPAVLRPGRLDKTLYVGLPPPADRHAILLTITKGGMKPRLESDVSLEAIASDE
RCDCFTGADLSALVREASVNALKSHLSSKTPLTHTEHTFSSGSVKDIRVSRQNFEEAFKK
VRPSVSKKDQLMYEKLRESLTR
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaccgaggtggtggtggtggtggtggtggtggatttgtggaccaaagactaaag
cagagagttgaacagtatctgaaatccaaaaacagccagtatgtggacattgctgaaatg
gctgctgatcttcagcgtcagtacagaatggaatacggcagacggaacagaattgctttc
aggattcaggtagagaaagtgcatggagtactatgcagcgagtcgggactctcttcttta
gaagacagacacttggccaaaagagcgagacgaagccaggaagatgaaggtgatgacagc
agtgtgctggaggattcatcagacagcgaggaggacatctcagagcctgagaacgccaat
cacatgaacagctctctgatttccctgtaccggaagggcgacccggagaacgggactcca
tctgaagagaagtctacagacagccccgccccagcctccgcccagaaaccggcatcaggt
gattctgctgccgccgccgctgccagctccacccctcatcgctctgccactgtggtgggt
agaggcggctggttcattgataaaacaggaaaaaaggacaaagaaaatattatgatcgat
ttgtgtgaggaggagccggctagccctgcgaaacaaccggatttgtacttactggagccg
gagaagaagacaaagaagagcacgaagaaaggaaaacggaaaacgcggagagaaggagga
ggagaaggcaaagatgttgacgctgatatcgaggcgagcataatgtcgaaaaaagcacgg
actaaagcccctgagctccagcactccacagtgaagtttgaggatgttggcggtaatgaa
gaaacgctgacggaattgtgtaaattgctgattcacatgcgtcatcctgaggtgtaccag
cagctgggggtagtgcccccacgtgggtttctccttcatgggccgcctggatgtgggaaa
acccttctcgcccaggctgtggcaggggagatggagctgcccatgttgaaggtgtctgct
ccagaactcgtgtccggcgtttcaggggaatcagaacagaagctacgtgagctgtttgat
caggctgtgagcaatgccccctgcattctgtttattgatgagatcgatgccattactcca
aaaagagaggtggcctccaaagacatggagagaaggattgtggctcagttgctcacttgt
atggatgacctgaactcattatctgtgccagctcaggtcttggttattggcgccactaac
agaccagactctctagatccggctctgagaagggcgggaagatttgacagagaaatctgt
ctgggaattcctgatgaagggacacggctcaggattcttcagactctctgtcggaagctc
aggctgcccgtggactttgatttccggcagctggcacggctcacgccgggatacgtgggc
gcggatctgatggcactgtgccgggaggcggccatgagcgcagtaaaccgggttctgctg
cagcgactggagacccctgacccacctgctgctaatgacatggaggtctctacacattta
cctgaaccacaggatccagaaacacagaaccagccgaccggtactgaccctcccactgac
cagagcaccacagaccactcccagcaagatgccagcccagaacagtgccaggagatgagt
gtttctaccagtgtggtggaagatggagagagtatagcagcttctgagcccctaatgaca
caacagggggagctagtgcagcttctgtctctgctgaagaggagtgagtctctgagtgag
gagcagcttgcaggactctgcatcctgatggacgactttaaggcctctctggccagcgtc
cagccttcagccaagcgcgagggcttcgccaccgtgccggatgtcacgtgggacgacata
ggagccctgcaggacattcgggaggagctcaccatggccatcttggcccctgtccgcagt
ccggagcagtttaaggctctgggtctgagcgctcctgcaggagttctgctcgctggaccc
ccaggctgtggaaaaaccctgctggctaaagcagttgccaacgagtctggtttaaacttt
atatccgtcaagggcccggagttactgaacatgtacgttggtgagagcgagagggccgtg
cgacaggtgttccaaagaggaagaaactctgcgccgtgtgtcatctttttcgacgagatt
gatgctctttgccctcggcgttctggtcatgagtctggagccagtgtccgtgtggtaaac
cagctgcttacagagatggatggcctggagacccgccgccaggtgttcatcatggctgca
accaaccgaccagatattatcgaccccgctgtcctcagaccaggccgattggataaaacc
ctgtatgtgggtttgcctccgccagcagacaggcacgccatcctgctcaccatcacgaag
ggaggaatgaagcctcgtctggagtcggatgtgagtttggaggcgatcgccagcgacgag
cggtgtgactgctttacaggggctgacctgtctgcactggtacgagaagcctcagttaac
gctttaaagtctcacctctcctcaaaaacacctctcacacacacagagcacacgttctcc
tcaggctctgttaaagatatcagggtcagcaggcagaattttgaggaggcctttaagaag
gtgcgcccatccgtgtccaaaaaggatcaactaatgtacgagaagctgcgggagtctctc
accaggtag
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