Astyanax mexicanus (Mexican tetra): 103033873
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Entry
103033873 CDS
T05042
Symbol
hif1ab
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha b
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04137
Mitophagy - animal
amex04140
Autophagy - animal
amex04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103033873 (hif1ab)
04137 Mitophagy - animal
103033873 (hif1ab)
04148 Efferocytosis
103033873 (hif1ab)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103033873 (hif1ab)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
103033873 (hif1ab)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
PAS_11
HIF-1a_CTAD
HIF-1
PAS
PAS_9
PAS_4
HLH
Rbsn
Motif
Other DBs
NCBI-GeneID:
103033873
NCBI-ProteinID:
XP_007256724
Ensembl:
ENSAMXG00000019342
UniProt:
A0A8B9RI89
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Position
1:70079885..70093971
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AA seq
785 aa
AA seq
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MDTGVATEKKRVSSERRKEKSRDAARCRRGKESEVFFELANQLPLPHNVTSHLDKASIMR
LTISYLRMRKLLSSGDAEKESELESQLNGFYLKALEGFLMVLSEDGDMVYLSENVCKCMG
LTQFDLTGHSVFDFAHPCDHEEMREMLVHRTGSKKTKEQNTERSFFLRMKCTLTSRGRTV
NIKSATWKVLHCTGHVRVQESGEGSADCSFREPPITYLVLICEPIPHPSNIEVPLDSKTF
LSRHTLDMKFSYCDERITELMGHEPDDLLNRSVYEYYHALDSDNLTKTHHNLFAKGQATT
GQYRMLAKKGGYVWVETQATVIYNPKNSQPQCIVCVNYVLSGIVEGDMILSLEQTVTEPK
AVEKEEKQKDKEEETEVDMDSFKQEKLTCSVESPESLYEKLKEEPEALTVLAPAAGDTII
SLDFNSSESEMQLLKEVPLYNDVMLPSTSEKLPLPLSPLAPSEPPPALDKLETGGEEFAF
PSTSHRSADAANTPSTPSTGSSTSAPNSPIDYCFQVDSDIGSEFKLDLVEKLFAIDTEAK
TPYSTQDMGDLDLEMLAPYIPMDDDFQLLIPSPLDPLPSGPHTVSDMSSLFQPLPTPSTT
ASSPSSSVSQESSSRVPSPLHMLQEVRSAPVSPFSGNRSREASPARAPTPQGSRTLTTGM
SAVDRELSPKVLAIQNAQRKRKLEEVTSLSQAVGLGALLQSVDDAIEPGKRAKVLEVKGS
SLLGGNKTILILPSDVASRLLCSSFESSGGLPRLTRYDCEVNAPVQDLHPLLQGEELLRA
LDQVN
NT seq
2358 nt
NT seq
+upstream
nt +downstream
nt
atggatactggagtcgccactgaaaagaaaagggtgagctcagagcgcaggaaggagaag
tccagggatgctgctcgatgccgcagggggaaggagtctgaggtgttcttcgaactagca
aatcagctgcctctgccccacaatgtcacctcccacctggacaaggcctccatcatgagg
ctgaccattagctacctgcgcatgagaaaacttctgagctctggtgatgcagagaaagag
tctgagctggagagtcagctcaatggcttctacctgaaagccttggagggcttccttatg
gtgctttctgaggatggggatatggtctatctctcagaaaatgtctgcaaatgcatgggc
cttacacagtttgatctgactggccacagtgtttttgactttgcacacccttgtgatcat
gaggaaatgagggaaatgctggtgcacaggacagggtccaagaaaaccaaggagcaaaac
acagaaagaagcttcttcctgcgcatgaagtgcacactcactagcagaggacgtactgtc
aacataaaatctgccacatggaaggtcctccactgcacagggcatgtgcgtgttcaggaa
tctggtgagggttctgcagactgtagcttcagagagcctcccattacttatctggtgtta
atttgtgagcccatcccccatccctccaacatagaggtgcctctggacagcaaaactttc
ctaagccgtcacaccctggacatgaagttctcatattgcgatgagagaatcacagagctg
atgggccacgagccagatgacttgcttaataggtctgtgtatgagtactaccatgctcta
gactctgataacctaaccaagacacatcataatttgttcgcaaagggccaggctacaaca
ggccagtatcgaatgctggctaagaagggaggctatgtgtgggttgagacccaggcgaca
gtaatttataatcccaaaaactcccagccacagtgtattgtgtgtgtcaactatgttctc
agtggcattgtggagggagatatgatcctctccctagagcagacagtgactgagccaaag
gctgtggagaaggaggagaaacaaaaggacaaagaagaggaaactgaggtggacatggat
tccttcaagcaggagaagctgacatgttctgtggagagtccagagagcctctacgagaaa
ctgaaggaggagcctgaggcacttacagtgctggctcctgctgcaggagacaccatcatc
tcactggactttaacagctctgagtctgagatgcagttgctgaaggaagtgcccctctac
aatgatgtcatgctgccctctaccagtgagaaacttcctctgcccctgtctccactggct
ccaagtgagccccctccagctttggacaaactagagactggaggagaggaattcgcattt
ccttctacttctcaccgcagtgcagatgctgcaaacactccttccacaccatctactggg
tccagcacttcggcgcccaacagtccaatagattactgtttccaagttgattcagacatt
ggttcagagttcaaactggatttggttgaaaaattgtttgctattgacactgaggccaag
accccatacagcactcaagatatgggtgatctcgacctggagatgcttgctccctatatt
ccaatggacgatgacttccagctgctcatcccctctccgctggaccccctcccctctgga
ccccacacagtctcagacatgagctccctgttccagcccttacccactccttcaactaca
gcttctagccctagcagctctgtatctcaggagtcctcttcccgtgttccctcacccctt
cacatgctgcaggaggtacgcagcgcccctgtctcacccttcagtggtaatcgaagtcgt
gaggcctccccagctcgtgcacccaccccacaggggagcaggacccttacaacagggatg
tctgcggtggatcgagagctgtcaccaaaggtgttagccatccagaatgcccagcgcaag
aggaaactggaagaggttacctcactgtcccaggctgttgggctgggtgctttgctccag
tctgtggatgatgcaatagaaccaggaaaaagagccaaagtactggaggttaaaggctct
agtttgcttggtgggaacaagaccattcttatactgccatctgatgtggccagtcggttg
ttgtgcagctcgtttgaaagcagtggagggttacctcggctgacgcgctacgactgtgag
gtcaacgctcccgttcaggacctccatcctttgctacagggggaagagctactgcgtgct
ctggaccaagttaactga
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