Astyanax mexicanus (Mexican tetra): 103033918
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Entry
103033918 CDS
T05042
Symbol
rxrga
Name
(RefSeq) retinoic acid receptor RXR-gamma-A
KO
K08524
retinoid X receptor alpha
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03320
PPAR signaling pathway
amex04148
Efferocytosis
amex04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
103033918 (rxrga)
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
103033918 (rxrga)
03320 PPAR signaling pathway
103033918 (rxrga)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103033918 (rxrga)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
amex03310
]
103033918 (rxrga)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
103033918 (rxrga)
Nuclear receptors [BR:
amex03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
103033918 (rxrga)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
103033918
NCBI-ProteinID:
XP_022529542
Ensembl:
ENSAMXG00000041881
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All DBs
Position
18:39715867..39743561
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AA seq
439 aa
AA seq
DB search
MDDHGYLHVGSSVHLAHNHLRPPPSQPPIVSMMTHHHQSVISSLASPFSVITSSSLSPLT
SPVPSTPSGGYSPYSPQIHSLSSSDDMKPLPSLTSRSSSFQCISPGSLSKHICSICGDRS
SGKHYGVFSCEGCKGFFKRTVRKDLTYMCRDSKECLIDKRQRNRCQYCRYQKCLAMGMKR
EAVQEERQRGRERMSDSEVDSSTGLNEEMPVEKILDAELAVEPKTETYLPSNTGNSQTND
PVTNICQAADKQLFTLVEWAKRIPHFSQLPLDDQVILLRAGWNELLIASFSHRSVTVKDG
ILLATGLHVHRSSAHSAGVGSIFDRVLSELVSKMKDMQMDKTELGCLRAIVLFNPDAKGL
SSPSDVEVLREKVYASLESYTKHRYPQQPGRFAKLLLRLPALRSIGLKCLEHLFFFKLIG
DTPIDTFLMEMLEAPHQIT
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atggatgaccacggctacctgcatgtgggttcctcagtgcatctcgcccataatcacctg
agaccccccccctcccagccccccatcgtctccatgatgacccatcaccaccagtccgtc
atcagcagcctggcatcccccttctctgtcatcacttcctcctcactgagccccttgacc
tcccccgtacccagcacccccagcgggggctacagcccatacagcccacagattcactct
ctgagcagctcagacgacatgaagcctcttcccagtctgaccagcaggagcagcagcttc
cagtgcatcagtccaggctccctgtccaaacacatctgctccatctgtggagatcgatct
tcaggaaagcactatggggtgttcagctgtgagggctgtaagggcttctttaagagaaca
gtgcgtaaagatctgacgtacatgtgccgggacagtaaagagtgtctgatagataaacgg
cagaggaaccgctgtcagtactgccgctatcagaagtgtctggccatgggcatgaagaga
gaagctgtacaggaggagaggcagcggggtcgagagaggatgagtgatagtgaggttgac
tccagcactgggttaaatgaggagatgccggtggagaagattctagatgctgaattagcc
gtggagccgaaaacagagacgtacctgccgtccaacacaggaaactcacagaccaatgac
cccgtcaccaacatctgccaggcagctgataagcagctgttcactctggtagagtgggcc
aaacgcatcccgcacttctctcagctccctctggacgaccaggtcatcctcctgcgagca
ggctggaatgagttgctgattgcctcgttctctcatcgctctgtgacggtgaaggatggt
attctgctggcgaccggtctgcacgtgcaccgcagcagtgcccacagtgcaggagtgggc
tccatcttcgacagggtgctgtctgagctggtgtctaaaatgaaggacatgcagatggat
aagactgagctgggatgcctccgagccatcgtcctctttaacccagatgcaaagggtttg
tccagtccgtcagatgtggaagtgctgagggagaaggtttacgcctccttagagtcctac
actaaacacagatacccccagcagcctggcaggttcgctaagctcctcctgcggcttcct
gctcttcgctccataggcctgaagtgtctcgagcatctgttcttcttcaagctcatcgga
gacacgcccatagacactttcctaatggagatgcttgaagctccgcaccagatcacatga
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