Astyanax mexicanus (Mexican tetra): 103033940
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Entry
103033940 CDS
T05042
Symbol
colgalt1a
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex00310
Lysine degradation
amex00514
Other types of O-glycan biosynthesis
amex01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
103033940 (colgalt1a)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
103033940 (colgalt1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
amex01003
]
103033940 (colgalt1a)
Enzymes [BR:
amex01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
103033940 (colgalt1a)
Glycosyltransferases [BR:
amex01003
]
O-Glycan biosynthesis
O-linked Gal type
103033940 (colgalt1a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
103033940
NCBI-ProteinID:
XP_007229106
Ensembl:
ENSAMXG00000034980
UniProt:
A0A8B9GU35
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Position
3:complement(5095055..5112843)
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AA seq
608 aa
AA seq
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MFREVLLGWALGFLLSFGWVLGYFHEERWSPESPLLAPRVVIAMICRNSEHSLPYFLGTI
ERLNYPKERIALWVATDHNSDNTTYLLRDWLINVQKLYHYVEWRPQEEPRSYADEEGPKQ
WPNTRYAHVMKLRQAALESAREMWADYLMIVDCDNLLTNRDVLWKLIRENKTVVAPMLES
RAAYSNFWCGMTSQGYYKRTPAYIPMRKQVRKGCFAVPMVHSTFLLDLRKEASRLLAFHP
PHPDYSWAFDDIIVFAFSARMAEVQMFVCNKETYGNFPVPLRSHNSLQDEIDSFMHTVLE
INVRNPHVEPSKYLPAPIRQPDKMGFDEVFMINLQRRTDRRERMLRALSEMEIDCKVVAA
VDGKAMNVSEIHALGIHMLPGYSDPYHGRPLTKGELGCFLSHYNIWKEIVDRGLKSSLVI
EDDLRFEVFFKRRLKNLLIEVQREGLDWDLIYIGRKRMQVDRPEKAVPKVHNLVEADYSY
WTLGYMMSLQGAKKLLNVDPLSKMLPVDEFLPIMFNKHPISDYMEQFEDRNLKAFSAEPL
LVYPTHYTGEPGYISDTETSTVWDNEGVRTDWDRKRSRKTHEQAEISTEAQNSDVLQSPL
DSTARDEL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtttcgggaggttttgttggggtgggcgctggggttcctgctgagcttcgggtgggtc
ctcggctacttccatgaagagcgctggagcccggagtctccgctgctcgcccccagggtg
gtgatagccatgatctgcaggaactccgagcactccctgccctatttcctcgggaccata
gagcggctgaactacccaaaggagcgcatagctctgtgggttgcaacagaccataattct
gacaacactacgtaccttctccgagactggctcatcaacgtacagaaactgtaccactac
gtggagtggcggccacaggaagaaccaagatcgtatgctgatgaggaaggtcccaagcag
tggccaaacacccgatacgctcatgtgatgaagctgcgccaggctgctctggaatcagca
cgagagatgtgggctgactatttaatgatagttgactgtgacaaccttctgaccaatcgg
gatgtcctgtggaagctgatacgagaaaataaaactgtcgtggctccgatgctggaatct
cgagctgcatattccaatttctggtgtggaatgacatcccagggttactacaagcggact
cctgcatacatacccatgcggaagcaggtgaggaaaggctgctttgctgttcccatggtg
cactccacctttctgctggatctgcgtaaagaagcctccagactcctcgccttccaccca
ccacacccggactacagctgggccttcgatgacatcatagttttcgccttctcagcccga
atggcagaggtgcagatgtttgtctgcaacaaggagacttatggcaatttccccgttcct
ctgcgatcgcacaacagtcttcaggacgaaatcgacagcttcatgcacactgtgctggag
atcaacgtgagaaatccacatgtggagccttctaagtatcttccagcccccatcagacaa
ccagacaagatgggctttgatgaggtcttcatgataaacctacagaggagaactgatcgg
agagagcgaatgctgagggcactgagtgagatggagatcgactgcaaggtggtggcagct
gttgatggcaaagccatgaatgttagtgagatccatgctttgggaatccacatgctgccg
gggtacagtgacccctaccacggccggcctctcacaaaaggggagctgggctgctttctc
tcccactataatatctggaaggagattgtggatcgaggcctgaagtcatcgctggtgatt
gaagacgatctgcgctttgaggttttctttaagcgtcgtctgaagaatctgttgattgag
gtgcagagggaaggtctggactgggatcttatctatattggcagaaagaggatgcaggtg
gaccgcccagagaaagctgtacccaaagtacacaacctggtggaggcggactattcctat
tggacgctgggttatatgatgtcgttacagggcgccaaaaagctcttaaatgtagatcca
ctcagcaagatgttacctgtggacgagtttcttccaattatgttcaacaaacatcctatt
tcagactacatggagcagtttgaggacagaaacctgaaggccttctcagcagagcccctg
ctggtctaccccactcactacacaggcgagccgggctacatcagcgacactgagacgtcc
acggtctgggacaatgagggcgtgcgcacggactgggacaggaagcgttcacgcaaaacc
cacgaacaggccgagatcagcacagaggctcagaactcagacgtgctgcagtctcctttg
gacagcacggcgcgggacgagctatga
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