Astyanax mexicanus (Mexican tetra): 103033952
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Entry
103033952 CDS
T05042
Symbol
utp18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103033952 (utp18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amex03009
]
103033952 (utp18)
Ribosome biogenesis [BR:
amex03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103033952 (utp18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_EML_2
WD40_CDC20-Fz
WD40_Prp19
WD40
WDR55
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
NBCH_WD40
ANAPC4_WD40
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
EIF3I
WD40_MABP1-WDR62_1st
Beta-prop_HPS5
Beta-prop_TEP1_2nd
KNTC1_N
Beta-prop_Vps41
Pox_D5
Beta-prop_TEP1_C
Beta-prop_SPT8
Motif
Other DBs
NCBI-GeneID:
103033952
NCBI-ProteinID:
XP_007230824
Ensembl:
ENSAMXG00000007967
UniProt:
A0A8T2M4D0
LinkDB
All DBs
Position
3:32213159..32226102
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AA seq
479 aa
AA seq
DB search
MMEDEEERRLQELVFGAEEQLLQKLEESDEGSVGEESSDSEEENQSRLQVPTKRKAAWED
EDDDEEEEVDMTHRFRKDFKKSDVESKMSKQKLQQRLKDQFQKSMGGAPSWAEKSSKKSK
KKGVDDSDDEKDEDEEDDELLKKTGNYVGSSESLPKGIIKLKMCLNANNENPGEDRLTTV
QFHPSAQVVMTAGLDHTISLFQVDGKTNPKIQSIHLEKFPVNKACFSANGEQVVATGMKN
KLFYIYDMMEGKVIPVPRVRGLNEQRVKEFEVSPDGEFLLLTGSSGYLHLMTMKTREVVR
SMKMNGNVCGTAFTGDGSKIFANSDEGEVFIWDVRSSKCLNKFVDEGCVRGTSLAVSRDG
LYVACGSQSGVVNIYSQNTCLQDSSPKPLKAVMNLLTAATSLRFNPNSEILAIASRAEDE
ANRLVHIPSFTVFSNFPLFRKKTIYRSHCLDFSPNSGFYSVANDKGRAVLFRLLHYKDF
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggatgaggaggagaggagactgcaggagctggtgttcggagctgaagagcaa
cttctacagaaactagaggagagtgatgagggcagtgtgggagaagaatcaagtgactca
gaagaggagaatcagtctcgtcttcaggttcctacaaaaagaaaagcagcatgggaggat
gaggatgatgacgaggaagaggaggtcgacatgacacaccggtttcgcaaggactttaag
aagagtgatgtagaatccaaaatgtccaaacagaagctccaacagcggctaaaggaccag
tttcagaagtcaatgggtggagctccttcctgggctgagaaaagttctaagaaaagtaag
aaaaaaggggttgatgacagtgatgatgaaaaggatgaggatgaagaagatgacgagctg
ttaaagaagactggtaactacgttggttcatctgaaagcctccctaaaggaattattaag
ctaaagatgtgcctaaatgcaaataacgagaatccaggtgaggatcgactgacaacagtg
cagttccacccctctgctcaagtcgtcatgacagctggactggatcacaccatctcactc
tttcaggtggacggtaagaccaatcccaagatccagagcatccacctcgagaagtttccg
gtgaataaggcctgcttcagtgccaacggtgaacaggttgtggccacaggaatgaaaaac
aagctcttctacatctatgacatgatggaggggaaagtaatccctgtgcccagagtgaga
ggcctgaatgagcagcgagtgaaggaatttgaagtttctccagatggagagttcctcctc
ctcacaggatcctcaggatacctccatctcatgaccatgaagacaagagaggtggtgcga
agcatgaagatgaatggcaatgtgtgtggaacagcatttaccggtgacggcagtaagatt
ttcgccaactcagatgagggtgaggtgtttatctgggatgtacgcagcagtaagtgtctg
aacaagtttgtggatgaaggctgtgtgaggggaacgtctctggccgtgtcgagggacgga
ctctatgtagcgtgtggttctcagtctggtgtggtgaacatctactcccagaatacatgt
ctgcaggattcttctccaaagcccttgaaagctgtgatgaatctgctgacggccgccact
tcactgagatttaatccaaattctgagattttagccatcgcctcccgcgcagaggatgaa
gccaatcggctggtccacattccaagctttacagttttctccaactttccattattccgg
aaaaagaccatctatcgctcccactgcctggatttctcccccaacagcggcttttattct
gtggctaacgacaagggtcgtgctgtgctttttaggctgctgcattataaagacttctga
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