Astyanax mexicanus (Mexican tetra): 103034014
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Entry
103034014 CDS
T05042
Symbol
lrrc4cb
Name
(RefSeq) leucine-rich repeat-containing protein 4C
KO
K07523
netrin-G1 ligand
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
103034014 (lrrc4cb)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_14
ig
V-set
LRR_9
Ig_2
LRRNT
Ig_6
DUF7617
Syndecan
Motif
Other DBs
NCBI-GeneID:
103034014
NCBI-ProteinID:
XP_007239179
Ensembl:
ENSAMXG00000025571
UniProt:
A0A8B9H9G9
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All DBs
Position
23:complement(302073..365052)
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AA seq
631 aa
AA seq
DB search
MLNKMTSYHPHQMMRGPRWKGVWFDPFILLLLALQLLVVAGLVRAQTCPSVCSCSNQFSK
VICTRRGLREVPDGISTNTRYLNLQDNLIQVIKVDSFKHLRHLEILQLSKNHIRNIEIGA
FNGLTNLNTLELFDNRLTTIPNGAFEYLSKLKELWLRNNPIESIPSYAFNRLPSLRRLDL
GELKRLSYVSDGAFEGLGNLRYLNLGMCNLKEVPNIQPLVRLDELEMSGNQLTVIRPGSF
KGLVHLHKLWMMHAQVQIIERNSFDDLQSLGELNLAHNNLTFVPHDLFTPLRHLQRVHLH
HNPWNCNCDILWLSWWLRETVPTNTSCCARCYSPPSLKGRYIGELDQSYFQCYAPVIVES
PADLNATEGTAVELKCRTNSLTSVSWLTPNGSVLTHGASKGRVTVQNDGTLNFTSVTMQD
MGTYTCKVSNMLGNVSASVLLNVTSVDNSGFSYFTTVTVETIESPIDGDGRTPVQPSFGW
VSSSTTRGTPISTEKAYTVPVTDIDVEGALNGLEEVMKTTKIIIGCFVAITLMAAVMLII
FYKMRKQHHQQDHDGPSRAIEIINVDDELAGMPAMESHLTLPPLEHEHYNHYNSYKSAYN
HASTLSSLHSSAHEPLLIQASSKDNVQETQI
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgttgaacaagatgacctcttaccatccgcaccagatgatgagaggtcctagatggaag
ggggtttggttcgaccccttcatcctgctgctcttggctctgcagttgctggtggtggcc
ggactggtccgggcccagacctgtccctctgtctgttcctgcagcaaccagttcagcaag
gtaatctgcacccgcagaggactgagggaggtccctgacggcatctccaccaacacccgc
tacctgaaccttcaggacaatctcatccaggtcatcaaagtggacagcttcaagcatcta
cggcacttggagatcctccagctcagcaaaaaccacatccgcaacattgagatcggcgcc
ttcaacggcctgaccaacctcaacaccctcgagctcttcgacaatcgcctcaccaccatc
ccgaatggagctttcgagtatctctccaagctcaaagagctgtggcttcgaaataacccc
atcgagagcatcccgtcctacgccttcaaccgcctgccctcgctgcgtaggctggacctg
ggcgagctgaagcgtctctcctacgtctctgacggagctttcgagggcttggggaacctt
cggtacctgaacctgggaatgtgtaacctcaaggaggtgcccaacatccagcccttggtt
cgcttggacgagctggagatgtcagggaaccagctgacggtgattcggcccggttccttc
aagggtctcgtccacctccataagctgtggatgatgcacgcccaggttcagatcatcgag
cggaactctttcgatgacctgcagtcattgggtgagcttaatctggctcacaacaacctc
acctttgtgccccatgacctttttacccctttgcgccatctgcagagggtgcatctacac
cacaatccctggaactgcaactgtgacatcctgtggttaagctggtggcttagggagacc
gtgccgaccaacaccagctgctgcgcccgctgttactcccctccgagccttaaggggcgc
tacatcggcgagctggaccagagctactttcagtgttatgcaccagttatcgttgagtct
cccgcggacctcaatgcgaccgagggaacggcagtggagcttaaatgtcggacaaattcg
ctgacctccgtcagctggctaacaccaaatggctccgttttgacgcacggggcatccaaa
gggcgcgtcaccgtccagaacgacgggaccttgaacttcaccagtgtcaccatgcaggac
atgggaacctacacctgcaaggtcagcaacatgctgggaaacgtctcggcttccgtcctg
ctcaacgtgacctccgtagacaacagcgggttcagttacttcaccaccgtcactgttgag
acaatagagtccccgatcgacggggacggcagaacccccgtacagccgtccttcggctgg
gtgtcgtcctccacgacgcgggggacacccatctccaccgagaaggcctacaccgtcccc
gtgacggacatagacgtggagggagcgctcaacggcctggaggaagtcatgaagaccacc
aagatcatcatcggctgcttcgtggccatcacgctcatggccgctgtcatgctcatcatc
ttctacaagatgcgaaagcagcaccaccagcaggaccacgacggaccctctcgcgccatc
gagatcatcaacgtggacgacgagctggcggggatgccggcgatggagagccacctgacc
cttcccccgctggagcacgagcactacaaccactacaactcctacaagagcgcctacaac
cacgcctccaccctcagctcgctgcacagctccgcccacgaacctttactaatccaagca
agctcaaaagacaacgtgcaggagacacaaatctga
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