Astyanax mexicanus (Mexican tetra): 103034069
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Entry
103034069 CDS
T05042
Symbol
irf6
Name
(RefSeq) interferon regulatory factor 6
KO
K10154
interferon regulatory factor 6
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103034069 (irf6)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amex04147
]
103034069 (irf6)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
103034069 (irf6)
Exosome [BR:
amex04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103034069 (irf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-3
IRF
Motif
Other DBs
NCBI-GeneID:
103034069
NCBI-ProteinID:
XP_049327779
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All DBs
Position
24:32490816..32500276
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AA seq
476 aa
AA seq
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MSVHPRRVRLKPWLVAQVDNGVFPGLVWLDREAKRFQIPWKHATRHTAQQEEENTIFKAW
AVETGKFQEGVDEPDPAKWKAQLRCALNKSREFNLIYDGTKEVPINPLKIYDVCDIPQPL
SNPGSTGSVPTYDSDGEDDDVADTPEPPPPPYHPPVSSSPLAPPVWTPPGSVSPLQPPSC
PPVPSEVWPKKEPMDVEMEIQHANMEQPPITTIPDTLFTTPETWISSLPMTDLEVQFYYR
GKEVCPAVTVSNPQGCRLFYGDLGPMVNQEELFGPISLEQLRFPPIEHINNDKQRLFTNR
LLDVMDRGLILEVSGHDIYAVRLCQCKVYWSGPCAPNPNAPNLIERQRKVKLFCLESFLS
SVIAHQRGQSPTLPQFDIHMCFGEEWPDGRPRERKLIMVQVVPVVARIICEMFSGDGTRS
FDSGSVRLQISVPDIKDNIVTQLKQLYRLLQTHQGHDTWPLPPGANVHLPATLHAQ
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgcacccccggcgtgtgcggctgaagccctggctggtggctcaggtggataac
ggggtgtttccagggttggtgtggttggaccgtgaggccaaacgctttcagattccatgg
aaacatgccacccggcacaccgcccagcaggaggaggagaacaccatctttaaggcgtgg
gctgtggagacgggaaagtttcaggagggcgtggacgagccggacccggcgaagtggaag
gctcagctccgctgtgctctaaacaagagccgggagtttaacctgatctacgacggaacc
aaagaagttcccatcaaccccctgaagatctacgacgtgtgtgacatcccccagcctctc
agcaaccctggttctacaggttctgttcctacgtatgattctgacggtgaggatgatgat
gttgcagatacaccagaacccccaccacctccgtaccaccctccagttagcagttccccc
ctggcacctcctgtttggaccccaccaggatctgtgtcccccctacaaccccccagctgc
ccccctgtcccttcggaggtgtggcctaagaaagagccaatggacgtggagatggagatc
cagcacgccaacatggagcaaccacccataaccactataccagatacactgttcaccacc
ccggagacctggatcagctccctgcccatgactgatctggaggtgcagttttattaccgt
ggtaaggaggtgtgtccagcagtgacggtcagtaaccctcagggctgccggctgttctat
ggtgatctgggtccgatggtgaatcaggaggagctgttcggtccgatctctctggagcag
ctccgcttcccccccatcgagcacatcaacaacgacaagcagcggctcttcaccaaccgc
ctgctggacgtgatggaccgcggactcatcctggaggtcagcggacacgacatctacgcg
gtgcggctgtgccagtgtaaagtgtactggtccggaccctgtgctccaaaccccaacgct
cccaacctcatcgaacgccaacgcaaggtcaaactcttctgcctggagtccttcctcagc
agtgtaattgctcatcagcgtggtcagtctcctactttgcctcagtttgatatccacatg
tgttttggagaggagtggccagacggccggccgagggagaggaagctgatcatggttcag
gtggtgccggtggtggctcgcattatctgcgagatgttctctggagacgggactcgctcg
ttcgacagcggtagcgtccggctgcagatctccgtccccgacatcaaggacaacatcgtc
actcagctgaagcagctctaccgcctcctacagacgcaccagggccacgacacctggccc
ctccccccgggggccaacgtccacctgcctgccacgctgcacgcgcagtaa
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