Astyanax mexicanus (Mexican tetra): 103034139
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Entry
103034139 CDS
T05042
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103034139 (lingo1a)
Membrane trafficking [BR:
amex04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
103034139 (lingo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
Ig_3
LRR_1
ig
Ig_2
LRR_EndoS
LRR_9
LRRNT
Ig_C17orf99
Motif
Other DBs
NCBI-GeneID:
103034139
NCBI-ProteinID:
XP_007228605
Ensembl:
ENSAMXG00000024883
UniProt:
A0A8B9K000
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Position
2:complement(43259237..43480397)
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AA seq
616 aa
AA seq
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MVAGEASGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNAQERSVVCHRKKLLSVPE
GIPSETRMLDLGKNRIKTINPEEFSGFPNLEELELNENTISTIEPGAFNNLYGLRTLGLR
SNKLKLIQLGVFTGLSNLTRLDISENKIVILLDYMFQDLYNLRSLEVGDNDLVFISHRAF
HGLSSLEHLTLEKCNLTSVPTEAFTHLHSLNTLRLRNLNINSIRDYSFKRLNRLKVLEIA
NWPYLDTMTTNCLHGLNLTSLTITSANLTSIPYVALRHLVYLRFLNMSYNPIMIIEGNKL
HDLLRLQEFHLVGGRLAMIEPYSFRGLNYLKILNVSGNSLTTLEESVFHSVGNLETLVLY
DNPLACDCRLLWIFRRRWRLNFNRQQPTCSSPEFVQGKEFKDFPDILQPNYFTCRKSRIR
DRKPQQKFVDEGTTVHFACQADGDPAPVIMWLSPQKQYITTKTIGRLTVFPDGTLEVRYA
QIQDNGTYMCIASNAGGNDTALAHLHVHSYSPDWPNQPNKTFADMLNQPSDNGGANGTKA
TVPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGI
SSSTADAPRKFNMKMI
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtggctggggaagcgagcgggcacagctacctggtggcgtgctggcagcccatccta
attttgatgctgggcactgtgctgtccggctctaccactggctgcccgtcccgctgcgag
tgcaatgcccaggagcgctctgtcgtgtgccaccgcaaaaagctgctgtcagttcctgag
ggtatcccgtctgagacacgaatgctggacctcggcaagaaccgcatcaaaaccatcaac
cccgaggagttctccggctttcccaacctggaagagctggagctgaatgagaacaccatc
tccaccattgagcctggagcatttaacaacctgtacggcctgcggactcttgggctgcgc
agcaacaagctgaagctcatccagctgggtgtattcacaggccttagtaacctcacccgg
ctggacatcagcgagaataagatagtcatcctgctggactacatgtttcaggatctgtac
aacctgcgctctttagaagtgggcgataacgacctggtgtttatatcgcaccgggcgttc
cacggcctcagcagcctggaacacctgacgctggaaaagtgcaacctgacctctgtaccc
acggaggcctttactcacctgcacagcctcaacactctgcgtctgcgtaacctgaacatc
aacagcatcagagactactccttcaaacgtctcaaccgactcaaagtcctggagatcgcc
aactggccctacctggatactatgaccaccaactgcctgcacgggttgaatcttacatcc
ctaacgatcaccagcgccaatctgacttcgattccttatgtggcccttcgacatctggtt
tacctgcgctttctgaacatgtcctacaaccccattatgatcattgaggggaacaagctg
cacgacttgctcagactgcaggagttccacctggtgggaggcaggctggcgatgattgag
ccgtactctttcagaggactcaattacctaaagattctgaacgtgtctgggaattctcta
accactctggaggaatcagtcttccactcggtggggaacctggagacactggtgctgtac
gataaccctctggcgtgcgactgtaggcttctgtggatcttccgccgccgctggaggctc
aactttaaccggcagcagcccacgtgctcctcccccgagttcgtccagggcaaagagttc
aaagatttcccggacatcttacagccaaactatttcacgtgtcgcaagtccaggatccgg
gatcgcaagccgcagcagaagtttgtggacgagggaactacggtgcactttgcgtgccag
gcagatggagatccggcaccggtcatcatgtggctctctccacagaagcagtacatcact
acgaaaacgataggaaggcttacggtctttcccgacggcaccctagaggtgcgctacgct
cagatccaggacaatggaacttacatgtgtattgcaagtaacgccggtggaaatgataca
gctcttgctcatctccacgtccacagctactcccctgactggcccaaccagcccaacaaa
accttcgccgatatgttaaaccagcccagcgacaacggaggtgccaatgggacgaaagca
acagtcccgttcccctttgacatcaaaaccctcatcatcgccaccaccatgggcttcatt
tccttccttggtgtggtattattctgcctggtgctgctgttcctgtggagcaggggtaaa
gggaacaccaaacacaacatcgagatagagtacgtaccacgtaagtcagacgcagggata
agcagcagtactgctgacgctcctcgcaagtttaacatgaaaatgatttaa
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