Astyanax mexicanus (Mexican tetra): 103034142
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Entry
103034142 CDS
T05042
Symbol
sbno1
Name
(RefSeq) protein strawberry notch homolog 1 isoform X1
KO
K26273
protein strawberry notch
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103034142 (sbno1)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
103034142 (sbno1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
103034142
NCBI-ProteinID:
XP_049325000
Ensembl:
ENSAMXG00000019473
LinkDB
All DBs
Position
20:complement(1985959..2003731)
Genome browser
AA seq
1412 aa
AA seq
DB search
MKPALTTMDPGQDLLLAALSESGICPNDLFDFDCQDNVQPPASQQSVSKNVLDIGLGNEA
AGIVRIEPAVPPTPTVRQKPQPSTTTFVLNQLNQLPSLGTIVVTKPSVGTTSRQTITVTK
VVHHSQSTAQRSTSSPSPVPTVGTVVPSDQEQVKLKDLLRTSNLKTNSLGELMKLKPPPD
IAQPVATATGTKIILISTKMMNKPAEVNNGVKKEVSSKDVARIWVNDEIKMRSFSPVNKL
PVMKEEEEPEEEEEEELGHAETYAEYMPMKLKIGERHPDPVVETSSLSSVNPPNVWYRLS
IPEETIDRGWLSALQLEAITYASQQHETFLPNGDRAAYLIGDGAGVGKGRTIAGIIYENY
LLGRKRSLWFSVSNDLKYDAERDLRDIGAKNIQVHSLNKFKYGKISSKHNGSVKKGVIFA
TYSSLIGESQSGGKYKTRFKQLLHWCGDDFDGVIVFDECHKAKNVCPIGSSKPTKTGLAV
LELQNKLPKARVVYASATGASEPRNMAYMNRLGIWGDGTPFKEFTNFIQAVERRGVGAME
IVAMDMKLRGMYIARQLSFQGVTFKIEEVPLAQNYIKMYNKSVRLWVSAREKFQHAANLM
DAEQRMKKSMWGQFWSAHQRFFKYLCIASKVRRVVQLAREEVKNGKCVVIGLQSTGEART
LEALEEGGGELNDFVSTAKGVLQSLIEKHFPAPDRQKLFSLLGIDMSAKKTPSPAETATE
QKGKKRKGLEVKKEVKKARKSGGLSGSSSDDSNSEDSDEAESNDSFDSVSSGDDEDDFNP
FKDDSSEDEEDDPWLIRKESKKSKEKNKKKKKKSIDPDSIQSALLASGLGSTRPAFTTPV
VKPTSNNTVTAAAKSEPEESSCVTSHDAVEDAQQMKRELLEQLEKLAESLPPNTLDELID
ELGGPENVAEMTGRKGRVVSNDDGSISYESRSELDVPVEILNLTEKQRFMDGEKNIAIIS
EAASSGISLQADRRVKNQRRRVHMTLELPWSADRAIQQFGRTHRSNQVTAPEYVFLISEL
AGEQRFASIVAKRLESLGALTHGDRRATETRDLSRFNFDNKYGRNALEIVMKSIVNLDSP
LVSPPCDFDGDFFKEIRNGLIGVGLINVEDRSGVLSLDKDYNNIGKFLNRILGMEVQQQN
ALFQYFSDTLSAVVQNAKKNGRYDMGILDLGSGDEKVKKFDVKKFLTPGYSTSGHVELYT
VSVERGMSWEDATHVWAEQDGPDDGFYVQVRNNKKIAIMVKEVNTKKRLFMVYRPNTGKQ
LKLEAYADIRKRCKKVLSDEAKQHWIDQYQSSAEICSHAYWRGNCKKASVGLQCEIGLRC
RTYYVLCGSVLSVWTKVEGVLASVSGSNVKMQIVRLRTEDGQRIVGLIIPPNCVAPLTNI
LSSSDQSQQLAVQQQQMWQQLHPQSISHTVNT
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgaagccagctctaacaacaatggatccaggacaggatttgcttcttgcagccctgagt
gagagtggaatctgcccaaacgacctttttgactttgattgtcaggacaatgtccagccc
cctgcctctcaacagtcggtctcaaaaaatgtccttgacattggcttgggcaatgaggcg
gctggaatagttagaatagaacccgctgtgccacccacacccactgtcagacagaagcct
cagccctcaaccaccacttttgtcttaaatcaactgaatcagttgccatcactgggaacc
atagttgtcaccaaaccctcagtggggaccacctcaagacagaccatcacagtaactaaa
gtggtgcatcacagccaatcaacagcccagcggagcacctcctcaccctcccctgtcccc
accgttggcactgtggtcccgtcagaccaggagcaggtcaagctgaaggaccttctcagg
accagtaacctgaagaccaacagcctcggagagctgatgaagctgaagcctccacctgat
atagctcagcctgtcgctacagctacaggcacaaaaattattttgatctccacaaagatg
atgaataaaccagcggaggtgaacaatggtgtaaagaaagaagtgtctagtaaagatgtg
gccaggatctgggtcaacgatgaaataaaaatgcgaagcttttcgcctgtaaataagtta
ccagtaatgaaggaggaagaggaaccagaggaggaggaagaggaggagttgggacatgca
gaaacgtatgcagagtacatgccaatgaaactgaagatcggagagcggcatcctgatccc
gtggttgagaccagctccctctcaagtgtcaacccgcccaacgtgtggtacagactttcc
attccagaggagaccattgacagaggctggctgtctgctcttcagcttgaggccatcaca
tacgcttctcagcaacatgaaacattccttccaaatggtgacagagcagcgtacctgatt
ggagatggtgctggtgttggaaagggcagaaccattgctggcattatatatgagaattat
cttctaggcagaaaaagatcgctctggtttagcgtgtcaaatgatttaaaatacgatgcg
gagagggacttgagagatattggagcaaagaatattcaggtccattctttgaacaagttc
aagtatggaaaaatctcctccaaacacaatggaagtgtgaaaaaaggtgtgatctttgcc
acatactcctccctaattggagaaagccagtctggtgggaaatacaagaccaggttcaaa
cagctgcttcactggtgtggagatgactttgatggtgtgatagtctttgatgagtgtcac
aaagctaagaacgtgtgccctattggctcatcaaaaccaaccaagactggactggcagtt
ctggagcttcagaacaagctgcccaaagcacgggttgtctacgccagcgctacaggagca
tctgagcctcggaacatggcgtacatgaaccgtctcgggatttggggggacggaactccg
tttaaagagtttaccaattttattcaagctgttgagagaagaggtgttggtgccatggag
attgttgccatggatatgaaattgagaggcatgtacatcgctcgacagctgagcttccaa
ggcgtgacgtttaagattgaagaagttcctctggctcaaaactacatcaagatgtataac
aagtcagtccggctgtgggtgagtgcgagagagaagttccagcatgcagctaacctgatg
gatgcagaacagcgtatgaagaaatccatgtgggggcagttctggtctgcacaccaaagg
ttcttcaagtacctttgcatcgcctccaaagtccggagagtggtccagctcgcccgagag
gaagtgaagaatggaaagtgtgtggtcatcggcctgcagtcgacgggggaagctcgaaca
ctcgaggcactggaggaaggcgggggcgagctcaatgacttcgtctccactgcaaaggga
gttctacagtcgctgatagagaagcattttcctgctccagacagacagaagctcttcagt
ttgctgggcattgatatgtccgcaaagaaaacaccatcaccagcagaaaccgcaaccgag
cagaagggcaagaaaagaaaaggtttagaggttaaaaaggaagtaaagaaagcccgtaag
tctggagggctttccggcagcagctcagatgacagtaattcagaagactctgatgaggct
gaaagtaatgacagctttgactctgtgagctcaggagacgatgaagacgactttaacccc
ttcaaggatgattctagcgaggatgaggaggacgacccttggctaattagaaaagaatcc
aagaagagcaaagagaagaacaagaaaaagaagaaaaagagcatagacccagattccatt
caaagtgccttgttagcctctgggcttggctcgaccaggcctgcgttcaccacgcctgta
gtgaaacccacgtccaacaacacagttactgctgctgctaaaagcgagcccgaggagagt
agctgtgtgacgagtcatgatgctgtggaagacgctcagcagatgaagagggagctgctg
gagcagctggagaagctggcggagagccttcctcccaacacgctggatgagcttatcgat
gagttgggaggacctgaaaatgtggcagagatgaccgggcgaaaagggagagtggtcagc
aatgatgatggcagtatttcttatgaatcaagatcagaactggatgttcctgtagaaatt
ctaaacctaactgagaagcagagattcatggatggagaaaagaacattgccataatttct
gaggctgccagctctggtatttcactacaagcagaccgtagagtaaagaaccagagaagg
agggtgcacatgacattagagctgccatggagcgcagacagggctattcagcagtttggt
agaacacacagatcaaaccaggtcactgcacccgaatacgtgttccttatctctgaactg
gctggagaacaaagatttgcctctattgttgccaaaagattagagagtctgggtgctcta
acccatggagacagaagagccacagaaactagagacctcagtcggttcaacttcgacaac
aagtatggtaggaatgctctcgagatcgttatgaagtccattgtgaatctggattcccca
ttggtctccccgccctgtgattttgatggggatttctttaaagaaatccgcaatggttta
attggtgtgggactgattaacgtggaggatcgatcgggagttctctcactagataaagat
tacaacaacattgggaagttcctgaaccggattctgggtatggaggtgcagcagcagaac
gccctgttccagtatttctcagacactttaagtgctgtcgttcaaaacgccaaaaagaat
ggcagatacgacatgggcattctggatctgggctctggagatgagaaagttaagaagttt
gatgtgaagaagtttttgacaccaggatattccacatcaggacatgttgagctctacacg
gtgagtgtggagaggggtatgtcgtgggaggatgccacccatgtttgggcagaacaggat
gggccagatgatggtttctatgtgcaggtacggaataacaagaaaattgccatcatggta
aaagaggtcaacaccaaaaagaggctcttcatggtgtacagacccaacaccgggaaacag
ctcaaactggaggcgtacgctgacattcggaagagatgtaaaaaggttctttcagatgaa
gccaagcagcactggattgatcagtaccagtcttcagcagagatctgctctcatgcatat
tggcgtgggaactgtaagaaggcctcagtgggactgcagtgtgagatcgggctgcgctgc
aggacgtactacgttctctgtggttctgttctcagcgtgtggaccaaagtagaaggcgtt
ttggcgtctgtcagcgggagcaacgtgaagatgcagatcgtgcgtttgagaactgaggac
gggcaacggatagtaggcctgatcattccacccaactgtgtggctcccctgaccaacatc
ctgtcatcgtcagaccaatcgcagcaactggcagtacaacagcagcagatgtggcagcag
ctgcacccacagagcatcagccacacggtcaatacctag
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