Astyanax mexicanus (Mexican tetra): 103034184
Help
Entry
103034184 CDS
T05042
Symbol
slc6a1l
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1 isoform X1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
103034184 (slc6a1l)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amex02000
]
103034184 (slc6a1l)
Transporters [BR:
amex02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
103034184 (slc6a1l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF
RhodobacterPufX
Motif
Other DBs
NCBI-GeneID:
103034184
NCBI-ProteinID:
XP_049329761
Ensembl:
ENSAMXG00000005624
LinkDB
All DBs
Position
2:19698961..19736493
Genome browser
AA seq
597 aa
AA seq
DB search
MGKTGQSTVDLNSPSEVKQAVPFEEMNHSMTPPEEEKKSELPDRGTWKGKFDFLLSCIGY
AIGLGNVWRFPYLCGKNGGGAFLIPYFTTLVFAGIPLFLLETALGQYTSVGGLGVWKLIP
MMKGVGLAAAVLSFWLNIYYIIIISWALYYLFSSFTSELPWQSCENPWNTESCFSNYSLP
DTTNLTSAVTEFWERNMHQLTDGLEEPGELRWPLVGTLALAWVLVYFSIWKGVEWTGKVV
YFSATYPYFMLFILFFRGVTLPGAKDGVLFYITPDFNKLLKSEVWLDAATQIFFSYGLGL
GSLIALGSYNPFNNNVYRDAVIVCCINSFTSMFAGIVIFSIVGFMSNITKKPIQELAASG
PGLAFLAYPQAVTQLPMSSLWSILFFSMLLMLGLDSQFCTVEGFITALMDEYPSVLRKRK
KVFILIVCIISFLIGLSNITQGGLYVFKLFDYYSASGMCLLFLVFFETVAIAWFYGADRF
YSNIEEMIGYRPCGWWKLCWLYFTPLICLGVFTFSAIEMTPLTLGKYVYPAWGQGIGWLM
ALSSMVLIPGYVIYMFLSTKGSLRQRWHKMTTPTDEVNTSGDKDILGHQTIIAEASF
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atggggaagactggacagagtacggtggacctgaactcgccctcggaggttaagcaggcc
gttccgtttgaggagatgaaccacagcatgactccacctgaagaagagaagaagtcagag
cttcctgatcgaggaacctggaagggcaagtttgacttcctgttgtcctgtatcggatac
gccatcggcctcggcaacgtctggaggttcccttacctgtgtggcaagaatggaggagga
gcatttctgattccgtacttcactacgctggtttttgctggaatccctctgttcctgctg
gagacggcgctcggacagtacacctcagtgggtggattaggggtgtggaaacttataccc
atgatgaaaggtgtgggtctggctgctgcagttttgtccttctggctcaatatttattac
ataatcatcatctcctgggcgctctactacctgttcagctctttcacatcagagctgccg
tggcagagctgtgaaaacccctggaacactgagagctgcttttctaactacagcctgccc
gacaccaccaacctgaccagcgctgtgaccgagttctgggagagaaacatgcaccagctg
acagatggactggaggagccaggggagttacgctggccacttgttggcactctggccctg
gcctgggtcctggtctacttctccatctggaaaggggtggaatggactggaaaggtggtg
tacttctccgccacttacccctacttcatgctcttcatcctgttcttccggggggtcact
cttccgggggctaaagacggagttctgttctacatcacccccgacttcaacaagctgctc
aaatcagaggtgtggctggatgctgccactcagatcttcttctcttatggtctggggttg
ggctctctgatcgcactgggaagctacaatccattcaataacaacgtctacagggatgct
gtcatcgtgtgctgcataaactccttcaccagcatgtttgctggcattgtcatcttctct
atagtgggattcatgtccaacatcaccaaaaaacccatccaggagcttgctgcttcaggt
ccaggtctggccttcctggcgtatccccaagcagtgacccaactgcccatgtcctccctg
tggtccatcctgtttttctccatgctgttgatgctgggactggacagccagttctgtacg
gtggaaggtttcatcacagctctgatggacgagtatcccagcgtcctgagaaagagaaag
aaagtgttcatcctcatcgtctgcataatatccttcctcataggcttgtccaacatcaca
cagggtggtctgtatgtgtttaagctgtttgattattactcagccagtgggatgtgcctc
ctcttcctggtgttcttcgagaccgttgctatagcctggttttatggagcagacaggttc
tatagtaacattgaggagatgattggctatcggccgtgtggctggtggaaactctgctgg
ctctacttcaccccactcatatgtctgggggttttcaccttcagtgcgatagagatgacc
cccctgacgctggggaagtacgtgtacccggcctggggacagggcatcggctggcttatg
gccctgtcttcaatggtgctcatccctggatatgtcatttacatgttcctcagtaccaag
ggcagcttacgccagcgctggcacaaaatgaccacgcccactgacgaggtcaacacttca
ggggacaaggacatcctgggacatcaaacgatcattgctgaagcttccttctga
DBGET
integrated database retrieval system
