Astyanax mexicanus (Mexican tetra): 103034187
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Entry
103034187 CDS
T05042
Symbol
myo5c
Name
(RefSeq) unconventional myosin-Vc
KO
K10357
myosin V
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
103034187 (myo5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amex03019
]
103034187 (myo5c)
04131 Membrane trafficking [BR:
amex04131
]
103034187 (myo5c)
03029 Mitochondrial biogenesis [BR:
amex03029
]
103034187 (myo5c)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amex04812
]
103034187 (myo5c)
Messenger RNA biogenesis [BR:
amex03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
103034187 (myo5c)
mRNA cycle factors
P-body specific factors
103034187 (myo5c)
Membrane trafficking [BR:
amex04131
]
Others
Actin-binding proteins
Myosins
103034187 (myo5c)
Mitochondrial biogenesis [BR:
amex03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
103034187 (myo5c)
Cytoskeleton proteins [BR:
amex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
103034187 (myo5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Csm1_N
nSTAND3
AAA_16
AAA_22
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
103034187
NCBI-ProteinID:
XP_007235204
Ensembl:
ENSAMXG00000017029
UniProt:
A0A8T2MGY3
LinkDB
All DBs
Position
2:complement(47779701..47803679)
Genome browser
AA seq
1743 aa
AA seq
DB search
MALQELYTKYNRVWIPDSEQVWKSAEILKDFSPGDPTLHLQLEDGTVLQYPVEGPGQLPH
LRNPDILVGENDLTALSYLHEPAVLHNLRVRFVDSRIIYTYCGIILVAVNPYKQLPIYGD
GVIHAYSGQNMGDLDPHIFAVAEEAYKQMARNNQNQSIIVSGESGAGKTVSARYAMRYFA
MVSKSSSNKRVEDKVLASNPITEAIGNAKTTRNDNSSRFGKYTEISFDRRYQIIGANMRT
YLLEKSRVVFQSENERNYHVFYQMCACADQPEFKSLRLLSADKFNYTCMGGDTEIQGVDD
CADMAETRRTFSLLGLKEDFQSDVFKMLAGILHLGNVVIKAVGSDQSSISSSDSHLVVFC
DLLGVRGEEMSRWLCHRRIVLASETVVKPQPKERAINARDALAKHLYAYLFDCVILRINQ
ALRVPGKQHSFIGVLDIYGFETFDVNSFEQFCINYANEKLQQQFNLHVFKLEQEEYMKED
IPWTLIDFYDNQPVIDLIEAKMGILDLLDEECLFPQGTDKNWLQKLYNYLGSKPHFEKPR
LSNEAFVIQHFADKVQYQCRGFLEKNRDTLYEELVDVMRASKFPLLTDFFTEEENNAVTK
VKVKAARPGVKPANKQLRSTVGDKFRSSLYLLMETLNATTPHYVRCIKPNEEKLPFEYDS
KRVVQQLRACGVLETVHISAQSYPSRWTYIEFYSRYSILMSQAELRAGDKKQICRTVLQR
LIHDSNQYKFGRTKIFFRAGQVAYLEKLRLDRLRTACIIIQKHLRGWSQRRRYLRLRQAA
IIIQEYIRGKRQIKRTVTAAALKQGWAAVVIQRHCRGYLVRRLYQLLRVAAITIQAYVRG
WMARKRYKKMMEEHKALVLQKYARAWLVRRRFQTMRRLVLNVQLSYRVQQLRKKIEEQNK
ENRGLVERLTSLANTHAQSLDRIQALEAELSKSTKEKASVEEREKKNKEDTSQVITQLQG
ERDKARQENQALQQKLKDSIQQMTDNFDGLKKKLVEDLEREERLRKVAEHSGELQREDLE
KEILALKEENRRMREEKLQLQTQASEDTQINKELQEQLSQLTKHVKVIPELRKEINILQT
EKDEANRKKKEHIQQTREKMNLITRQLLGETKEEELILRMKKEAAENSENEGDLLFAFDG
LQTATRVVETQLKEQRESYESQMEALVFKNDHLARENQQLQALFQEKSDVNQSIGQEVAR
LTAENMVIPDLKQQVAESQRHRQELETQLKEQNTEMTEKILKVSSELQNKLEKERSQRQL
LEERNRESTIEREEIQGRLEELEEEMEQLKRLHQTENETKNKLRQETSRLTAENMDFEEQ
IDMKDRTIKRLQDQIKALQAPVKVNQKAAQVLPKEYLGMLEYKKEDEDKLVRMLIRELKP
RGVVVNMIPGLAANLLFMCVRHSDYLNDGNKLKSLMHAIITAIKQVITDHQENFEILSFW
LSNTYYLLNCFKQYSGEEEFMKHNTPRQNKNCLQNFDLSEHRQILSDLAIRIYHQFINIM
EDTLFPMIVPAMLEHESLQGISSMKPTGFRKRSNSLLEEGRSEGQAYSVSSILQLMNSFH
NAMAQQGMELQLQGQAIRQLFYLIGATSLNSILLRKDLCSCRKGMQIRCNISYLEEWLRE
KGLQGCSAMETLGPLSQAAWLLQVNKTTDEDAAEIRQQCRELSAVQIVKILNSYTPIDDF
EKRVAPSFVRKVQGLLQEREGSNQLMMDAQYRFQVTFPFCPSTQALELLQVPSSLHLGFL
TRI
NT seq
5232 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgcaggagctctacactaaatataacagagtgtggattccggactcagagcag
gtgtggaaatcagcggagatcctcaaagacttcagtccaggagatccaactctacacctg
cagctcgaggatgggactgtcctgcagtaccctgtggaggggcctggacagttaccccac
cttcgtaacccagacatcctggtgggagagaatgacttgacagctcttagctacctgcat
gagcctgcagttctgcataacctgcgtgtcagatttgtggactctaggatcatctacaca
tactgcggcattatcctggtggctgttaacccatataaacagctccccatttatggagat
ggagtcatccatgcttattctggccagaatatgggagacctagatccccatatatttgca
gtggcagaagaagcttacaagcagatggcaagaaacaaccagaaccagtctatcatagtg
agtggggagtccggagcagggaagactgtgtccgctcgctatgctatgaggtacttcgcg
atggttagcaaatctagcagcaacaaacgagtggaggacaaggttttggcatcaaaccct
attactgaggctataggcaatgcaaagactacaaggaatgacaacagcagccgatttggg
aagtacactgaaatcagctttgatagaaggtaccagatcatcggcgcaaatatgaggaca
taccttctagaaaagtccagagttgtttttcagtctgagaatgagagaaactatcacgtc
ttctaccagatgtgtgcatgtgcagaccagccagagtttaagagcttgagactgttgagt
gcagacaagtttaattacacctgcatgggaggcgacacagagattcaaggagtggatgac
tgtgccgacatggctgaaacccgtcgaactttcagtctgctgggactgaaggaggacttt
cagagtgatgtgtttaagatgttggcagggattctgcacttaggaaatgttgtgatcaaa
gcagttggctcagaccagtcgtccatcagttcttctgactctcatctggtggtgttctgt
gatctgctgggtgtcagaggagaagagatgagtcgctggctgtgtcatcgtcgcattgtc
ctagcatctgagacagtggtcaaacctcagccaaaggagcgtgccatcaacgcccgtgat
gctctagccaagcacctctatgcctatctcttcgactgtgtcatcctcaggatcaaccag
gcactgcgtgtgcctggcaaacaacactcattcattggcgtattggatatatatggattt
gagacatttgatgtgaacagctttgagcagttttgcatcaactacgccaatgagaagttg
caacagcagtttaacttgcatgtttttaaactagagcaagaggagtacatgaaggaggac
atcccatggacactaatcgacttctatgacaaccaaccagtcattgatctgattgaggct
aagatgggcatcctggacttgctggatgaggagtgtctgtttcctcaggggactgataag
aactggcttcagaagctctataattatctgggctcaaaacctcattttgagaaacctcgt
ctgtccaatgaggcgtttgtaatccagcactttgcagacaaggtacaatatcagtgcaga
ggtttcttagagaagaacagagataccctgtatgaagagctggtggacgtaatgcgagct
agcaagtttcctctcttgacagatttcttcactgaagaggagaataatgctgttaccaag
gtgaaagtaaaagcagcgcgtcctggagtcaaaccagccaataagcagcttcggagcaca
gtgggagacaagttccgcagttctctgtatctgttaatggagacgctaaatgccaccaca
ccccattatgtccgctgcattaaacccaatgaagagaagctgccgtttgagtatgactca
aagcgtgtggtacagcagttgcgggcgtgtggtgtcctagagactgtacacattagtgct
cagagctacccatccaggtggacgtatatagagttctacagccgctacagtattctgatg
agtcaggcggagctcagagcaggggacaagaagcagatttgtagaacagtgctgcagaga
ctcatccatgactctaaccagtataagtttgggcgaaccaagatattcttccgggctgga
caggtggcgtacctggagaagctgcgcttggaccgtctgcggaccgcatgtattataatt
caaaagcatctgcggggctggagccagagacgcagatacctgcgcctgcgacaagctgcc
atcatcatccaggagtacatccgtggcaagaggcagatcaaacgcactgtgacagcagca
gcattgaagcagggatgggcagcagtggttatccagagacactgtcgtggttatcttgta
cgacggctttaccagcttcttcgggttgctgctatcactatccaggcttatgtcaggggg
tggatggcccgcaaacgctacaaaaagatgatggaggagcacaaagctctggtcttacag
aagtacgctcgggcctggctggtgcgacgtcgtttccagaccatgcgtagactcgtgctg
aatgtacagctctcgtatagagtccaacagctgcgcaagaaaatagaggagcagaataaa
gagaaccgtggacttgtagagagactgaccagtcttgccaacacccatgctcagtcactg
gacagaattcaggctctggaggcggagcttagcaaatcaaccaaggagaaggcatctgta
gaggagagagagaagaagaacaaagaggataccagtcaagtgattactcagcttcaggga
gagagggataaggcccgacaggagaatcaggctctccagcagaaactcaaagactccatt
cagcagatgacagataattttgatgggctcaagaaaaagcttgtggaggaccttgagcga
gaagagaggctgcgaaaggtggcagagcacagcggtgagctgcagagggaggacttggag
aaagagattttagcactaaaggaggaaaatcgcagaatgagggaggagaagcttcagctg
cagactcaggccagtgaggacacacaaatcaacaaagagctacaggagcagctcagtcag
cttaccaaacatgtcaaggtaataccagagttacgtaaggagattaacatcctccaaaca
gagaaagatgaagcaaacagaaaaaagaaggagcacattcagcagaccagagagaaaatg
aatttgattacgagacagcttctgggtgagacgaaagaagaggagcttattctcaggatg
aaaaaagaggctgcagagaattctgaaaatgaaggagatcttttgtttgcttttgatggg
ctgcagactgccaccagagtggtggagacccagttgaaggaacaaagggaaagctatgaa
agtcaaatggaagcactggtttttaagaatgatcacctggccagggagaaccagcagcta
caagccctctttcaggaaaagagtgacgtcaaccaaagcataggacaggaagtggcccgc
cttactgcagagaacatggtgatcccagacctgaagcagcaggttgcagagtcacagcga
cacagacaagagctggagactcaactaaaagaacaaaacactgagatgactgaaaaaata
ctgaaggtgtcctctgagcttcagaacaaacttgagaaggaacgctcccaaagacagctt
ttagaggagaggaatagagagagcaccattgagagagaggagatacagggaaggttggag
gagctggaggaagagatggagcagctaaagagacttcatcagacggaaaatgaaacaaag
aacaaactcagacaggagacttcccgccttactgctgagaacatggactttgaggaacag
atagatatgaaggacaggaccataaagagactgcaggaccaaatcaaagctcttcaggca
cctgtgaaagtcaatcagaaagctgcacaggtccttcctaaagaatacctcggcatgctg
gagtataagaaggaagatgaagacaagcttgtgcgcatgttaatacgagagctaaagccg
aggggtgtggtggtgaatatgatccctgggctggctgccaatctcctctttatgtgcgtg
cggcattctgattacctcaatgatggaaacaagctcaaatccctaatgcacgccatcatc
actgctattaaacaggtcatcacggatcatcaggagaactttgagattttgtctttctgg
ctttccaacacatactacctgctcaactgcttcaaacagtacagcggagaggaagagttt
atgaagcacaacacacctcggcagaacaagaactgcctgcagaactttgacctgtcagag
cacagacagatcctcagtgatctcgccatccgcatctatcaccagttcataaacatcatg
gaggataccctcttccctatgattgtccctgcaatgctggagcatgagagtctacaggga
atctctagcatgaagcccacaggtttccgtaagcgctccaacagcttgctggaggaaggg
cgcagtgagggtcaggcctacagtgtctcctctatcctgcagctgatgaactccttccac
aacgccatggcacagcagggcatggagctgcagctgcagggacaggccattcgccagctc
ttctacctgataggagccacctcactcaacagcatcctcctccgcaaagacctctgctcc
tgtcgcaagggcatgcagatcaggtgtaatatcagttatctggaggaatggttgagggag
aagggtttgcagggctgcagtgccatggagactctgggacctctgtctcaggcagcctgg
cttctgcaggtgaataaaactacagatgaggatgcagcagagattcggcagcaatgccgc
gagctttcagctgtgcagattgtgaagatcctcaactcatacacgcctattgatgatttt
gaaaagcgagtcgcaccttcgttcgtgcgtaaagttcagggactgttgcaggagcgtgag
ggctcaaatcagctgatgatggatgcacagtatcgattccaggtcacttttcctttttgc
ccatccacacaagccctggagctgctgcaggtgcccagcagccttcacctgggctttctc
acccgcatatga
DBGET
integrated database retrieval system
