Astyanax mexicanus (Mexican tetra): 103034231
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Entry
103034231 CDS
T05042
Symbol
nipbla
Name
(RefSeq) nipped-B-like protein A isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
103034231 (nipbla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103034231 (nipbla)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
103034231 (nipbla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
HEAT
HEAT_EZ
Cnd1
Cnd3
ARM_ECM29
Motif
Other DBs
NCBI-GeneID:
103034231
NCBI-ProteinID:
XP_022520623
LinkDB
All DBs
Position
22:complement(12700325..12733957)
Genome browser
AA seq
2302 aa
AA seq
DB search
MNGDMPHVPITTLAGIAGLTDLLNQLPLPSPLPGTTTKSLLYSVRVVEEVDRLLACRDDA
LVAQLTGGLAQVSTDHIELKDSLSSDELEGDVPVLLQLLLSRNPSIFRTKTSPTTPQYSA
QTAGLAQPQMAPPFKMTHNAMQGSPATTNYQQGSITHSPSGRFVAGQTGSGGRFLPQQTS
PVPSPYTPQSPVTGYRQFPHPPAYGQPQHLQPGSVASPMIPGEMRNPLESKDGMNFSGAP
PLLQSSPPYTPPQEAELLLGSVEKGRGLKGGDGDKVGVYDMVDSPDADGEKVHMVRSRPA
VEAELGGVFSGSDAEGELVEALAAIERMESEAAMETDRTAKEVQDKDKPLKKRKQDSHPQ
EPTAGGVGGVALGNRLAPVEGGALGGAEDSCTARSWPQEPQEGVTPKPLQRGNRQDDKKA
DAPRQKRRSDAHHDEGDASKPGELPAYELGENSGFKEPEGAGHVEVGTPLCWKQPRVCLE
RLETEAEPKKSVKPVVVLQKLSRDEVERLMKEKESRSKAKNRLTSGRYGKGVGDPSVLKD
LPPELLAEIESTMPLCERVKMNKRKRSTVNERPRYAEDSSDEDGRGNADSARKRQKKDRD
RTWEYEERDRRNSGEHRRGGGLHEGRRGRGSRYDDSEDDSPPPSLSEVARSLKKKEKEKK
RKAYEPKLTAEEMMDSSTFKRFCNSIDNILENLEDVDFSVQDDDEIPQELLLGKQQLGEL
GSESAKIKAMGIMDRIPSDKLVKLLNILEKNILDGANLSTLMSPENDGEDEERLWRDLIM
ERVTKSADACLTSLNVMTALHMPKAVYMEDVIERLLQFTKFHLQNTLYPQYDPVYRVDPK
GGSMLSSRAKRAKCSSTKQRVIIMLYNKVCDVVSNISELLEIQLMTDTTILQVSSMGITP
FFVENVSELQLCAIRLVTAVFSRYEKHRQLILEEIFTSLARLPTSKRSLRNFRLNSSDDE
GEPVYIQMVSALVLQLIQCVVHLPSDKDQLEDDHKKVDEDVLITNSYETARRTAQNFLSV
FLKKCGSKQGEEDYRPLFENFVQDLLSTVNKPEWPASELLLSLLGRLLVHQFSNKQTEMA
LRVASLDYLGTVAARLRKDSVTSRMDQKAIDRILQESSGNDETQQLQKALLDYIDENAET
DPALQFSRKFYIAQWFRDCTTECEKAMRTQKQDDSDGAQHAKELRATRDIMQRAEARKKF
LHTVIKASTNQFTTLRMNSNTVDYDDACLIVRYLASTRPFSQSFDIYLTQILRVLGESAI
AVRTKAMKCLSEVVAVDPSILARADMQRGVHGRLMDNSTSVREAAVELLGRFVLSRPQLT
EQYYDMLIERILDTGISVRKRVIKILRDICLEQPEFTRITEMCVKMIRRVNDEEGIKKLV
NETFQKLWFTPTPNHDKEAMNRKIINITDVVAACRDSGYDWFEQLLQNLLKLEEDSSYKP
TRKACVQLVDNLVEYILKHEEALAEHKSVNSTRMVACITTLYLFSKIRAQLMVKHAMTMQ
PYLTTKCSSQSDFLVICNVAKILELVVPLMEHPSESFLTTIEEDLMKLIIKYGMTVVQHC
VSCLGSVVNRVTRNYKFVWACFNRYYGALTKLKVQHQEGSASLAQAATKAALLRSLFTVG
ALCRHFDFDLEQFKGNTKIEIKEKVLELLLYFTNHEDEEVKCKAIIGLGFMFIMHPSQMF
VPEVKTLYNGLLSEPKSSVALKIQVLKNLQMYLQEEDSRMQEADREWQKLSKQEDLKEMG
DISSGMSSSIMQLYLKQVLEAFFHTQSSVRHFALNVIALTLSQGLIHPVQCVPYLIAMGT
DPEPTMRNKADQQLVEIDKKYTGFIHMKAVAGMKMSFQVQQAVVGVSSSVIRGFRKDESV
TALCSHLYSLIRNNRNQRRAFLISMLNLFDDSSKLAVKMLLFMADNLAYFPYQNQEEPLF
IMHHIDITLSVSGSNLLQTFKESLVRPADRPPRKRRLRVRVKEPRREQEEKREEEEEAER
GEEEEDQEEEEEGVVKVQEVQEHGRGSEAESESDSDLEDVEAVMERLPGDSAALLDFARA
SQGILLLLVLKQHLKNLYGFSDGKIQKYSPSESAKVYEKAVNRKSNVHFSPRQTIDFLSH
DDVHSELTDDLRRKIVKQYLDFKLLMEHLDPDEEEEEGEASAAVRNKAITALLGGAGGGS
SPRNHHPAESEEDDSEGEERAPGASRRGRRGAEALQGNLGESVSALDIVAIHRPRYRERP
QLARVIQRTADGYSVQWLSGSYSSSWTEARRRDGRKLVPWMENIRESDIVYKKISLTSGN
KLTHKLTHTLRSIYTHRDRTSS
NT seq
6909 nt
NT seq
+upstream
nt +downstream
nt
atgaatggggacatgcctcatgtgcccattaccaccctcgcgggaatcgccgggctaact
gaccttctgaaccagctgcccctgccctcccccctgcccgggaccaccactaagagtctg
ctatacagtgtgcgggtggtggaggaggtggaccggctgctggcctgcagggacgatgct
ctggtggcgcagctgacaggaggactggcacaggtctctactgaccacatagagctgaag
gacagtctgagttcggacgagttggagggagatgttccggttctgctgcagcttctgctc
tccaggaaccccagtatcttcaggaccaagaccagccctaccaccccccagtacagcgcc
cagactgcaggtttggcgcagccgcagatggcaccaccattcaaaatgacccataatgcc
atgcagggcagcccggccaccaccaactaccagcagggctccatcactcacagcccgtca
gggcggtttgttgcaggtcagacagggtccggtgggcgtttcctcccccagcagacgagt
cctgtgccaagcccgtacacaccccagagccctgtcactgggtacagacagttcccccac
cccccagcatacggccagccgcagcacctgcagccaggatctgtagccagtcccatgatt
cccggtgagatgaggaaccccctcgagagtaaggatggaatgaatttttctggagctccg
cccttgctgcagtcgtctccgccctacacacccccacaggaggcggagctgctgttgggc
tctgtggagaaggggcggggtctgaagggcggtgatggagataaagtgggggtgtatgat
atggtggattccccggatgcggatggtgaaaaggtgcacatggtgcgctcgcggccggcg
gtggaggcggagctcgggggcgtgttctctggttctgatgcggagggggagctggtggag
gctctcgccgccatcgagaggatggagagtgaggctgccatggaaacggaccgtaccgcc
aaagaggttcaggacaaagataagccactgaagaagaggaagcaggactcccacccgcag
gagccgactgcagggggtgttgggggcgttgctttgggtaaccggctggcccctgtggag
ggcggggcactgggcggggctgaagacagttgcacggcacgcagttggccacaagagcct
caggagggtgtgacccctaaacccctccagcgtggaaatcggcaagacgacaagaaggcg
gacgctccgcggcagaagcgccggtccgatgctcaccacgacgagggagacgccagcaaa
cccggcgaacttccggcttatgagctcggggagaactcggggtttaaggagcctgagggg
gcagggcatgtggaggtgggcacgcccttatgttggaagcagccgcgggtgtgtctggag
cggctggagacggaggcggagccgaagaagagcgtgaagcctgtggtggtcctgcagaag
ttgtctcgggacgaggtggagcgactgatgaaagagaaggagtctcgctctaaagccaaa
aacagattgacctctgggagatacgggaaaggtgtgggggacccctccgtgctgaaggac
cttcctcccgagctgctggcggagatcgagtccaccatgccgctgtgtgagcgggtgaag
atgaataagcgtaagcgcagcacggtgaacgagcgcccgcgctacgccgaggacagctca
gacgaggacggccgggggaacgctgactctgctcgtaaacggcagaagaaggaccgtgat
cggacgtgggagtatgaagagagagacagaaggaactctggagaacatcggcgagggggc
gggctccatgaaggccgcagggggcggggcagccgctacgatgactccgaggatgactcc
ccccctcccagcctcagtgaagtggcacggagtctgaagaaaaaggagaaggagaagaaa
aggaaagcatatgagcccaaactcacagctgaggaaatgatggattcctccaccttcaaa
aggttttgcaacagtatagacaacatcctagagaacctggaggacgtggacttctctgtt
caggatgatgatgagattcctcaggagctgctgttggggaagcagcagttgggggagctg
ggcagcgagtcggctaagataaaggcgatgggcatcatggacaggatcccctctgataag
ctggtgaagctgctgaacatcctggagaagaacattctggacggagcaaatctctccacc
ctaatgagcccagagaatgatggtgaggatgaggagcggttatggagggatctgataatg
gagcgagtgacaaagtcggcggacgcatgtctgacgtctctgaacgtgatgacggcgctg
cacatgcctaaagccgtgtacatggaggacgtgatcgagaggctgctgcagttcaccaag
ttccacctgcagaacacgctgtacccgcagtacgaccccgtgtaccgcgtcgaccccaaa
ggaggctccatgctgagctccagggctaagcgtgctaagtgctccagcactaagcagaga
gtgattatcatgctgtataataaagtgtgtgacgtggtcagcaacatctcagagctcctg
gagatccagctgatgaccgataccaccatccttcaggtgtcctccatggggatcactccg
ttttttgtggagaatgtgagtgagctgcagctgtgtgccatcaggctggttacggcggtg
ttctctcggtatgagaaacacaggcagttaatcctggaggagatcttcacctctctggcc
cgactgcccaccagtaaacgcagcctcaggaacttcaggttgaacagcagtgatgatgaa
ggagagccggtgtatattcagatggtgagcgctctggtgctgcagctcatccagtgtgtg
gtgcacctcccctccgacaaggaccagctcgaggacgaccacaaaaaggtggatgaggat
gtgctgataactaactcgtatgaaacggctcggcgaacggctcagaacttcctctcggtc
tttctcaaaaagtgtggcagtaagcagggggaggaggactacaggccgctgtttgagaac
tttgtgcaggatcttctctccacagtcaacaaacccgagtggccggcgtctgagctgctg
ctcagcctgttgggacgattactggtgcaccagttcagtaataagcagacggagatggct
ctgagagtggcgtctctggactatctgggcactgtagcagctcggctcagaaaggactct
gttaccagcagaatggatcagaaagccatcgaccgcatattacaagagagctcaggaaac
gatgaaactcagcagctacagaaagctctgctggactacatcgatgagaacgcagagact
gacccggcgcttcagttttcgcggaagttctacatcgcgcagtggttcagggactgcacc
accgagtgtgagaaggccatgcggactcagaagcaggacgactctgacggcgctcagcac
gctaaagagctccgggccactcgagacatcatgcagcgagccgaggcccgcaaaaaattc
ctccacaccgtcatcaaagcctccacaaatcagtttactacgctcaggatgaattcaaac
actgttgactatgatgacgcctgccttattgtacgctacctggcctccaccagacccttc
tcccaaagcttcgacatctacctgacacagattctgagggtgctgggggagagtgcgatt
gctgtcaggaccaaagccatgaagtgtctctctgaggtggtcgctgtggaccccagtatt
ctggcccgggcggatatgcagcgtggagtgcacgggcgtttgatggataactccaccagt
gtgcgggaggcggcggtggagctgctgggcaggtttgtgctgagccgccctcagctcaca
gagcagtactacgacatgctcatcgagaggatactggacacggggatcagtgtgcggaag
cgtgtgataaagatcctgagggatatctgtctggaacagccggagttcaccaggatcaca
gagatgtgtgtgaagatgatccgcagagtcaacgatgaggagggaatcaaaaaactggta
aatgagacgttccaaaagctgtggttcacccctacgcccaatcacgacaaagaggccatg
aacaggaagatcatcaacatcactgatgtggtggcagcgtgtcgggactcaggttatgat
tggttcgagcagctcctgcagaacttactgaagttggaggaggactcgtcctataaaccc
accaggaaggcctgcgtccagctggtggacaatctagtggagtacatcctcaaacacgag
gaggctctcgcagagcataagagtgtgaactctacgcgtatggtggcgtgcatcactact
ctgtacctgttcagcaagatcagagctcagctgatggtcaaacacgccatgaccatgcaa
ccctacctcactaccaagtgcagctctcagagtgatttcctggtgatctgtaatgtagcg
aagatcctggaactggtggttccactgatggagcatccgagcgaaagtttcctcaccacc
atcgaggaggacctgatgaagctcatcatcaaatacggcatgaccgtggtgcagcactgt
gtgagctgtctgggctcggtggtgaacagggtgacccgtaactataagtttgtgtgggcg
tgttttaaccggtactacggcgccctgaccaaactgaaagtgcagcaccaggagggcagt
gccagcctggcacaagcggcaaccaaagccgcgctgctgcgctcactattcactgtgggg
gcgctgtgccgacacttcgacttcgacctggagcagttcaagggcaacaccaagattgag
attaaagagaaagttctggagcttcttctgtacttcaccaaccatgaagatgaggaggtt
aaatgcaaagccatcatcggcctggggttcatgtttataatgcaccccagccagatgttc
gttccagaggtgaagactctgtataacgggctgctctcagaacccaagagctccgtcgcc
ctgaagatccaggtgctgaagaacctgcagatgtacctgcaggaggaggactcgcgcatg
caggaggccgaccgagagtggcagaagctgtctaagcaggaggatctgaaggagatggga
gatatctcgtcggggatgagcagctccatcatgcagctctacctaaagcaggtactggag
gcgtttttccacacgcagtccagcgtccgacacttcgccctcaacgtcatcgccctgact
ctcagccaggggctcatacaccccgtacagtgtgtcccgtacctgatcgccatgggaacg
gacccggagcccaccatgaggaacaaagctgaccagcagctggtggagatagacaagaag
tacacgggcttcatccacatgaaggccgtggcggggatgaagatgtcgtttcaggtgcag
caggccgtggtgggcgtgtcatcgtctgtgattcgcgggttccgtaaagacgagtcggtc
acggcgctgtgctctcacctctacagcctgatccgcaacaaccggaaccagcgccgagcc
ttcctcatctccatgctcaacctgttcgacgacagctcgaagctggcggtgaagatgctg
ttgtttatggctgataatctggcgtatttcccgtatcagaatcaggaggagccgctcttc
atcatgcaccacatcgacatcacactctccgtatccggcagcaacctgctgcagaccttc
aaagagtctctggtcaggccggcggatcgaccccccaggaagcggcgtttgcgggtgcgg
gtgaaggagccgcggcgggagcaggaggagaagagggaggaggaggaggaggcagagaga
ggtgaggaagaggaagatcaggaggaagaggaggagggagtggtgaaggtgcaggaggtg
caggagcacggccgcggctcggaggcggagtcagagtcggattctgatctggaggacgtg
gaggcagtgatggagcgtctgcccggcgacagtgccgccctgctggacttcgcccgagcg
tctcagggcatcctgctactgctcgtcctcaaacagcacctcaaaaacctctacggcttc
tccgacggtaaaatacagaagtactctccctcagaatcggctaaagtctatgaaaaagcc
gtgaacaggaagtccaacgtgcacttcagccctcgccagaccatcgacttcctgtctcac
gacgacgtccacagcgagctcaccgacgacctgcggaggaagatcgtcaagcagtatctt
gactttaagctgctgatggagcacctggatcctgatgaagaggaggaggaaggtgaggcg
agcgccgccgtccgaaacaaagccatcaccgccctgctggggggggcaggggggggcagc
agcccccgaaaccaccacccggccgagtccgaggaggacgacagcgagggggaggagaga
gcgccgggggcgagtcggcgcgggaggagaggtgcggaggctctgcaggggaacctgggt
gagtcggtcagcgctctggacatcgtggccattcaccggccgcggtaccgggagcgcccc
cagctggcccgcgtcatccagcgcaccgccgatggctacagcgtccagtggctctccgga
tcctactccagctcctggaccgaggcccggcgccgggacggcaggaaactggtgccctgg
atggagaacatccgagaatcagacatcgtctacaagaagatctccctcaccagcggcaac
aaactcacacacaaactcacacacacactgcgcagcatctacacacacagagaccgcacc
tccagctaa
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integrated database retrieval system
