Astyanax mexicanus (Mexican tetra): 103034265
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Entry
103034265 CDS
T05042
Symbol
apex1
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) lyase
KO
K10771
AP endonuclease 1 [EC:
3.1.11.2
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103034265 (apex1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amex03400
]
103034265 (apex1)
Enzymes [BR:
amex01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
103034265 (apex1)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
103034265 (apex1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
103034265
NCBI-ProteinID:
XP_007229800
Ensembl:
ENSAMXG00000019636
UniProt:
A0A3B1KD21
A0A8B9GPN2
LinkDB
All DBs
Position
7:complement(24518610..24526111)
Genome browser
AA seq
312 aa
AA seq
DB search
MSKRAKKNEQAAADEANDNGTEPATKKGKKAKEPEAPILYEDPPDKLTSKDGRAANMKIT
SWNVDGLRAWVKKKGLDWVRQEDPDVLCLQETKCAEKSLPADITSMPEYPHKYWAGSEDK
EGYSGVAMLCKTEPIKVSYGIGKEEHDKEGRVITAEFPSFFLVTAYVPNASRGLVRLDYR
KTWDVDFRAYLTDLDKKKPLVLCGDLNVAHQEIDLKNPKGNRKNAGFTPEEREGFSQLLE
AGFTDSFRELYPEQTNAYTFWTYMMNARSKNVGWRLDYFLLSAALLPGLCDSKIRNTAMG
SDHCPITLHLVV
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaagagggccaagaagaacgagcaggctgctgcagatgaagccaacgataatgga
acagaaccggcaacaaagaaagggaagaaggcaaaggaaccagaggctccaattctgtat
gaggaccccccagataagttgaccagcaaggatggccgagcagccaacatgaagatcacc
tcttggaatgtggatggccttcgtgcctgggttaagaagaaggggcttgattgggtgcgt
caggaggatccagatgtgctctgtcttcaggaaactaagtgtgctgagaaatccctgcca
gcagatataacctctatgcctgagtatccacacaaatactgggccggttctgaagataag
gagggctacagtggggtggccatgctgtgcaagactgaaccaattaaagtcagctatggc
attggtaaagaggagcatgacaaagagggccgggtgatcactgctgagttcccctccttc
ttcctggtcacagcctatgtgcctaatgctagtcgtgggttggtgcgcctcgactaccgc
aagacctgggatgtggacttccgcgcctaccttactgatctagataagaaaaagccttta
gtgctctgtggagaccttaacgttgctcaccaggagattgatctgaagaaccccaaaggc
aaccgcaagaatgccggcttcactcctgaggagcgcgagggcttcagccagctcctggag
gctggctttaccgacagctttcgggagctgtatccagagcagaccaatgcgtacaccttc
tggacctacatgatgaacgcgcggtccaagaatgtgggctggcggctggactactttttg
ttgtctgctgccttgctcccaggtttgtgcgacagcaagattcgtaatactgccatggga
agtgaccactgccccatcaccctgcatctggttgtgtag
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