Astyanax mexicanus (Mexican tetra): 103034287
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Entry
103034287 CDS
T05042
Symbol
trpv1
Name
(RefSeq) transient receptor potential cation channel subfamily V member 1
KO
K05222
transient receptor potential cation channel subfamily V member 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
103034287 (trpv1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
amex04040
]
103034287 (trpv1)
Ion channels [BR:
amex04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
103034287 (trpv1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ion_trans
Ank_3
DUF2963
Motif
Other DBs
NCBI-GeneID:
103034287
NCBI-ProteinID:
XP_022521499
Ensembl:
ENSAMXG00000031865
LinkDB
All DBs
Position
1:11589849..11629092
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AA seq
793 aa
AA seq
DB search
MSNPFRLETDDRTDEMRAEDRAKKKAAGKCPGKSRGPMDTDCLDDHETPIQCRYNLNFNK
NKRGIKEDPSQREKERFDIKRLFDAVASGDVSKLEGLKEYLSKTNKKLTDTEYRHNGKTA
LLKALLNLRNGENDTVEHLLKIPEKEEDLKELVNAPYTDCFYKGQTPLHVAIERRSKHFA
DLLIQKGANVHAKACGSFFQPHGETCFYFGELPLSLAACTNQKEIVDLLMDNPVSKADVR
EKDSQGNTVLHALVAVADNSPENTDFVICMYDYILTKDAHMNPKRQKLEDIQNNQGLTTI
KLAAKTGKIGLFEHILHREFQQEECRHLSRKFTEWAYGPIYSSLYDLASVDTYEKNSVLE
IVVYGTEIPNRLEMLQVEPLNKLLEDKWNRFAHRIFLFNFICYLIYLFIFTAICSHHREG
QAFLPEKTTSGYLFFTGEIITCAASVYFFIKGLMDMMRKPPRMKTLLIDGYSDLNFFFQA
VCFLLCVVLYAFDSKAYLAFLVVCLAFSWVNLLYFSRGSRHMGIYSVMIQRMILSDMLRF
LFVYIVFLVGFSAAVNTLLKESDLEPAPTSPPTSPPTSSPKTHTNCSRVGGRSLFTDPDT
SEGCTKPTYKNISFTTLELFKFTIGMGDLEFTDQYQYQHVFYILLITYIILTYILLLNML
IALMSKRVEKMSKESTSIWRLQRAITTLDLERTLCWCLKTKLRSGVERDLGKRETDVRQC
LRVEEVNWNKWSRHVGIISEDPGDFSRGPPSPTRPQRGQTWRGFLRDFSRRRPMTRISED
EEQEMKPMAYTSV
NT seq
2382 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacccattcagattggagacggacgacaggacagatgagatgagggcagaggac
agagccaaaaagaaggcagcaggaaaatgcccaggcaagagcagagggcctatggacacg
gactgcctagatgaccacgagacccccatccaatgtcgatataatctgaacttcaataaa
aataaacgagggataaaagaagatccgtctcagagagagaaggagaggtttgatattaag
aggctgtttgatgccgtggccagcggtgacgtatctaagctagagggcctgaaggagtat
ctgagcaaaacgaataagaaactcacagacactgaatatcgacacaatggtaaaacagct
ctgctgaaggctctgttaaatctgaggaacggagagaacgatacagtggaacacttgctg
aaaatcccagagaaagaagaagatctgaaggagttggtgaacgccccgtacacagactgc
ttctataaaggtcagactcctctacatgttgcgattgagaggaggagtaagcactttgct
gatctgctgatccagaaaggggctaacgtccacgctaaggcctgcgggagcttcttccag
cctcatggagaaacatgtttctacttcggagagcttcctctgtctctggctgcctgcacc
aatcagaaggagatagtggacctgctgatggataacccggtcagtaaagcagacgtgagg
gagaaggactctcaggggaacacggtgctccacgctctggtggcggtggcagataacagc
cccgagaacaccgacttcgtcatctgcatgtacgactacatcctcaccaaagacgctcac
atgaaccctaagaggcagaagctggaggacatccagaacaaccagggactcaccaccatc
aaactggcggccaagaccgggaagataggattgtttgaacacattctgcatcgtgagttc
cagcaggaggagtgcaggcatctgtcccggaagtttacagagtgggcatacggtcctata
tattcctctctatatgacctggcctctgtggacacctacgagaaaaactcagtgctggag
atcgttgtgtacggcacagagataccgaatcgtctggagatgctccaagttgaacccctt
aataaactgctggaagacaaatggaacagatttgctcatcggatatttttatttaatttt
atttgctatctcatctacctcttcatcttcacagccatctgtagtcaccatagagaagga
caggcatttctccctgagaaaaccaccagtggctacctattcttcaccggtgagatcatc
acatgtgctgcatccgtgtatttcttcattaaagggttgatggacatgatgaggaaacca
cccaggatgaaaaccctgcttatagacggctattcggacctgaatttttttttccaggcg
gtgtgtttcctgctctgcgtggtgctgtatgcgtttgacagtaaggcgtatctggcgttc
ctggtggtgtgtctggccttcagctgggtcaacctcctgtacttctccagaggatctcgc
cacatgggcatctacagcgtgatgatccagaggatgatccttagcgacatgctgcgcttc
ctcttcgtctacatcgtcttcctcgtcgggttttcagcagctgtaaatacactacttaag
gagtctgacctggagcccgccccaacatctccaccgacatctcccccaacgtcttctcca
aaaacccacacgaactgcagccgtgtaggcggacgctcgctgttcacagatccagataca
tcagagggctgcacaaagcccacctataaaaacatctccttcaccacgctggagctgttc
aagttcaccatcggcatgggtgacctggagttcacggatcagtaccagtaccagcacgtg
ttctacatcctgctgataacctacatcatactgacgtacatccttctgctcaacatgctg
atcgccctcatgagcaagagggtggagaagatgtccaaggagagcaccagcatctggaga
ctgcagcgagccatcaccactctggatctggagagaactctgtgttggtgtctgaagact
aagctgaggtcaggagtggagagagatctgggaaaaagagagacagacgtacggcagtgc
ctcagagtggaagaagtcaactggaacaaatggagccgtcacgtgggcatcatcagtgaa
gaccccggtgacttcagccgaggcccaccgtctcccaccagacctcagagaggacaaacc
tggcgcgggttcctgcgggacttcagtcgacggaggcccatgacccgcatctctgaagat
gaagaacaggagatgaagcctatggcatatacctccgtctga
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