Astyanax mexicanus (Mexican tetra): 103034314
Help
Entry
103034314 CDS
T05042
Name
(RefSeq) protein HIRA
KO
K11293
protein HIRA/HIR1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103034314
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
103034314
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hira
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
WD40
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Beta-prop_Aladin
ANAPC4_WD40
Beta-prop_WDR36-Utp21_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_IFT140_1st
WDR55
Beta-prop_WDR75_1st
Beta-prop_WDR35_TULP_N
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_RIG_2nd
Beta-prop_HPS5
Beta-prop_WDR19_1st
HIRA_B
Tricorn_2nd
Mcl1_mid
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_EIPR1
Motif
Other DBs
NCBI-GeneID:
103034314
NCBI-ProteinID:
XP_049326531
Ensembl:
ENSAMXG00000030536
LinkDB
All DBs
Position
22:33451230..33485884
Genome browser
AA seq
1010 aa
AA seq
DB search
MKLLKPSWVSHNGKAIFSVDIHPDGTKFATGGQGEDSGKVVIWNMAPVLRDEDEKNENIP
KLLCQMDNHLACVNCVRWSNNGLCLASGGDDKLVMVWKKAAFIGPSTVFGSSSKLANVEQ
WRCVTILRSHTGDVMDVAWSPHDLWLASCSVDNTIVIWNARKFPEIVTTLKGHTGLVKGL
TWDPVGKYIASQADDHSLKVWRTMDWQMDTNITKPFNECGGTTHVLRLSWSPDGQYLVSA
HAMNNSGPTAQIIERDGWKTNMDFVGHRKAVTVVKFNPKIFKKKQRNGSAPKPSCPYCCC
AVGSKDRSLSVWLTSLKRPLVVIHDLFDKSIMDITWTLNGLGMLVCSMDGTVAFLDFSQD
ELGDPLNEEEKNAIHQNIYGKSLAVTMDTQLSSTIIENPEMLKYQQERRAAPTSSGAQGA
SLENQTPKLTNVVNGESLEDIRKNLLKKQVETRTADGRRRITPLCIAQLDTGDFSPALFN
SVPILPGSSVAPQLTPQLSSDSNTANSLCLKANQEPAASPTKTTDDKDSGTPAVNSASLK
SNLLLTTASKIEPMKALDSRFTERSKPTPGVTSSPAAAAAMPVSTVDRVKDTSVLKDWKM
KEETSSDSEDKVQKVPPLVKRKPEMEGAEVVEKRKKGRPRKDAKLMMAVPQAFPQTPVSV
EKETVRVSAPAVTLKLPTPAVQKSFSSQVGTDSVLYLEVENEVSVVAGARLSQLKCSRDG
REWDAVLPSRIAVVTGSSDVVAVACEDRTLSIYSSCGRRLLPSIMLPTPISALHCSGFFV
MALTASATLSVWNVQKLTAVVKNESLNSILLGSDATVSSSMLTDQGVPVVGLSNGKSFCF
SSSMETWNLIADKQDALVQCADFRNCVSAQDALGSVGPLATTQGRSLSAGRLASRLSSTP
HHLQQGMTLAFLEQQLSSALVLRSSSEYRHWLLIYTRFIVNEGYEHRLRELCKDLLGPVH
KSSTSSWEPTVLGLRKRDVLAEVLPVIGQNLRFQRLFTEYQDQLELLRLK
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgaagctgctgaagccgagctgggtctcccacaatggaaaggcgatattttcagtcgac
atccatccggatggaaccaagttcgccaccggaggccaaggtgaggactcggggaaagtg
gttatctggaacatggctccggttctcagagatgaggatgagaagaacgagaacattccc
aaactgctttgccagatggacaatcacttagcatgtgtgaactgcgtgcgctggtctaat
aacggactgtgtttggcctcgggtggagatgacaaactggtcatggtgtggaagaaagca
gcgttcatcggtcccagcacagtgtttggatcgagcagtaagcttgctaacgtggaacag
tggaggtgtgtgaccatcctgagaagccacacaggagatgtcatggatgtagcctggtct
cctcatgatctgtggttggcctcctgcagtgtggataacactatcgtcatctggaacgct
cgcaagttcccagagattgtgacgactctgaaaggtcacaccggtctggtgaaggggtta
acgtgggatcctgtagggaagtacatcgcctcccaggctgatgaccacagtctgaaggtg
tggaggaccatggactggcagatggacaccaacatcaccaagcccttcaatgagtgcggt
ggtaccactcatgttcttcgactcagctggtctcctgatggtcagtacttggtttctgct
catgccatgaacaactccgggccgacggctcagatcatcgagagggacggctggaagacc
aacatggatttcgtgggtcatcgtaaggccgtcactgtagtgaaattcaacccaaagatt
tttaagaagaagcagcggaacggcagcgcccccaaacccagctgcccgtactgctgctgc
gccgtgggcagcaaggaccgctctctgtccgtctggctcacttcactgaagcgccctcta
gtggtcattcatgatttgtttgataaatccatcatggatattacttggactctgaatggt
ctgggaatgctggtttgttccatggatggaacggtggcattcctggacttttcccaggat
gagctgggagatcctttaaatgaggaggaaaagaacgccattcaccagaacatttacggg
aagagcctggccgtcactatggacacgcagctctcctccaccatcatcgagaacccggag
atgctgaagtatcagcaggagcgacgggcggctccaacctccagcggtgctcagggagcc
agcctggagaaccaaacgcctaaactgaccaacgtggtgaacggagagtctctggaggac
atccgcaagaatctgttgaagaagcaggtggagaccaggacagcagacggccggaggagg
atcacaccactctgcatcgcacagctagatactggggatttctctcctgcactgtttaac
agcgtgcccatcctgcccggctcctcggtcgcccctcagctcaccccccagctctcttct
gattcgaacacagcaaactctctctgcctgaaagccaatcaggagcctgcagcatccccc
acgaaaaccacagacgacaaggacagtggtactccggccgtaaactcagctagtctgaaa
tccaacctgctgctgaccactgcttcaaagattgagccaatgaaagccctggattcacgg
ttcacagaaaggtcgaagcccacgcctggagtcaccagttcccccgccgctgccgccgcc
atgccggtttccacagtcgacagggtgaaggacaccagcgtcctgaaggactggaagatg
aaggaggagacgagcagcgacagtgaggataaggtgcagaaggtgccccctctggtcaaa
cgcaagcctgaaatggagggagcggaggtggtggagaagaggaaaaagggacgacccagg
aaagacgctaaactgatgatggctgtacctcaggccttcccacagactccagtctcagtg
gagaaggaaactgtgagggtctcggctccagcagtgacattaaaacttcctacacctgca
gtacagaaatctttcagctcacaggtgggtacggactctgtgttgtacctagaggtggag
aacgaggtgtcggttgtagctggagctcggctcagtcagctcaagtgtagcagagacggg
agagagtgggatgcggtgctgcctagtcgcatcgccgtggtgacggggagcagtgacgtg
gttgccgtggcgtgtgaggaccggacgctgtcgatatactcatcctgtgggcggagactt
ctcccgtcaatcatgctgcccacccccatatcagcactacactgctccggcttttttgtg
atggcactaacggcatcagccacgctgtctgtctggaatgttcagaaactgacggctgtg
gtgaagaacgaatcactaaactccatcttattaggttctgatgctacagtcagtagctct
atgttgacggatcagggggttcctgtggtcggtctctccaatgggaaatccttctgcttc
agctcctctatggagacatggaatctgatagcggataagcaggatgctctggttcagtgt
gccgacttcaggaactgtgtttcggctcaggacgctctgggctctgtcggacccctggcc
acgactcaggggcggagtctgagtgcgggccggctggcgtcccgtctgtcctccactccc
caccacctacagcagggcatgaccctcgccttcctggaacagcagctctcctccgctctc
gtcctgcgctcgtcctccgagtaccgccactggctgctcatctacacccgctttatagtt
aatgaaggttatgaacatcgtttacgggagttgtgtaaggatttactgggaccagtacac
aaatccagcaccagctcttgggaaccgacagtattgggtctgaggaagagggatgtgttg
gctgaggtcttgcctgtgattggtcagaatttgcgttttcagaggctcttcacggagtac
caggatcagctggagctgctccgcctcaaatag
DBGET
integrated database retrieval system
