Astyanax mexicanus (Mexican tetra): 103034383
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Entry
103034383 CDS
T05042
Symbol
cltcb
Name
(RefSeq) clathrin, heavy chain b (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04142
Lysosome
amex04144
Endocytosis
amex05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103034383 (cltcb)
04142 Lysosome
103034383 (cltcb)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
103034383 (cltcb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103034383 (cltcb)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amex04147
]
103034383 (cltcb)
Membrane trafficking [BR:
amex04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
103034383 (cltcb)
Exosome [BR:
amex04147
]
Exosomal proteins
Proteins found in most exosomes
103034383 (cltcb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
103034383
NCBI-ProteinID:
XP_007231092
Ensembl:
ENSAMXG00000002036
LinkDB
All DBs
Position
18:complement(6424028..6451606)
Genome browser
AA seq
1684 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICVREKVGEQAQVVIIDLSDPNN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDNAVYHWSMEGDSQPIKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAGFAQFKMEGNSEESTLFCFAVRSQAGGKLHIIEVGTPPSGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATAGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRMAVRNNLAGA
EELFARKFNTLFAGGNYSEAAKVAANAPKGILRTPDTIRRFQSVPAQPGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSVDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWIFLLRNVMRISPEQGLQFSQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPTEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLSTQSLTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLILVVRGQF
STDELVAEVEKRNRLKLLLPWLEARIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPELWASVL
LESNPYRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFRKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKGLVKEAIDSYIKADDPSAYMEV
GQAAAQSGNWEDLVKFLLMARKKARESYVETELIFALAKTNRLAELEEFVNGPNNAHIQQ
VGDRCYDEKMYEAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKESQFKDIVTKVANVELYYKAVQFYLEFKPLLLNDLLIVLSPRLDHTRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFIIEEDYQALRTSIDAYDNFDNISLAQSLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDTELAEELLQWFLQE
DKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAIKEKVDKL
DASESLRKEEEQATEAQPIVYGTPQLMLTAGPNVAVPPQQPYGYGYAAPTGYAQPAQPGF
GYGM
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatcctgcctatccgctttcaggagcacctgcagctccaaaacctgggcatt
aacccagcaaacatcgggttcagcactctcactatggagtctgacaagttcatctgtgtg
cgggagaaagtgggcgagcaggctcaggtggtgatcattgatttgagcgaccccaacaac
cctattcgcaggcccatctctgcagatagtgccatcatgaacccggccagcaaagtcata
gccctgaaagctgcaaaaacccttcagattttcaacattgaaatgaagagcaaaatgaag
gcgcacaccatgacggatgatgtcacattctggaagtggatctccctcaatactgtagca
cttgtaacggacaacgcagtctaccattggagtatggaaggcgactcgcagcccattaaa
gtgtttgatcgccactccagtttagccggctgccagattatcaactaccgcactgacgcc
aaacagaaatggcttcttctgattgggatttcagcacagcaaaaccgagtagtgggcgca
atgcagctatactctgtcgacaggaaggtgtcccagcctattgaaggccatgctgctggc
tttgcacagtttaaaatggagggaaattctgaagaatccactctcttctgttttgctgtt
cggagtcaagctggaggaaagttacacattattgaggttggcacacctccatctggaaat
cagccttttccaaagaaagcagtcgatgtgtttttccctccagaggcccagaatgacttc
ccagttgctatgcagatcagctccaagcaggatgtggtctttctcatcaccaaatatggc
tacatccacctttatgaccttgaaacgggtacctgcatctacatgaacaggatcagtggg
gagactatcttcgtgactgctccccatgaagctactgctggcattattggggtcaacagg
aaaggacaggtgctgtctgtgtgtgtggaagaggaaaacatcatcccctacatcaccaat
gttctgcagaaccccgacctggccctgcgcatggctgtccgcaacaacctagctggcgct
gaggagctgtttgcacgcaagttcaacactttgtttgcagggggcaactactcagaggct
gccaaagtggctgccaatgcaccaaagggtatcctccgaaccccagacaccatccgacgg
ttccaaagcgtcccggctcagccaggccagacctcccctctgctgcagtattttggaatc
ttgctggatcagggccagctcaacaagtttgagtccctggagctgtgcaggcctgttctg
cagcagggccgcaagcagctgctggagaaatggttgaaggaagataagctggagtgctca
gaagagttgggtgatttggtgaagtccgtggacccgacccttgctctcagtgtctaccta
agggctaatgtccccaacaaagtcatccagtgctttgcagagactggccagttccagaaa
attgtactgtatgcaaaaaaggttggctacactccagactggatcttcctgcttagaaat
gtcatgcggatcagtccggaacagggcctacagttctctcagatgcttgtgcaggacgag
gagccattggctgatatcactcagattgtggacgtgttcatggagtacaaccttatccag
cagtgtacttccttcctgctggatgctctgaagaacaaccggcctactgagggacctctg
cagaccaggctgcttgagatgaacctgatgcatgctccacaggtggctgatgccattctt
gggaaccagatgttcacgcactatgaccgagcccatgtggcacagctgtgtgagaaagct
ggactgcttcagagagccctggagcactacactgatttgtatgacatcaagcgagctgtg
gtgcacacccacctgctcaacccagagtggctggtgaacttcttcggctcactctcagtg
gaggactctctagagtgcctgagagccatgctgtccgctaacatccgccagaacctgcag
atctgcgtccaggtggcttccaagtaccatgagcagctctccacccagtccctcactgag
ctcttcgagtcctttaagagctttgaaggtctgttctactttcttggctccattgtgaac
ttcagccaggatccagaggttcatttcaagtacattcaggcagcatgcaaaactggccag
atcaaagaggtggagagaatctgccgagagagtaactgctatgaccctgagcgtgtgaag
aatttcctcaaggaagctaaactgactgatcagctgcctctcatcattgtttgtgaccgc
ttcgactttgtccatgacctggtcctttatctgtaccgcaacaacctgcagaagtacatt
gagatctacgtccagaaggtgaaccctagccgtcttcctgtggtgattggcggcctgctg
gatgtcgactgctctgaggatgtcatcaagaacctgatcctggtggttcggggccagttc
tccacagacgagctggtagctgaagtggaaaagaggaacaggctgaagctgctgctgccg
tggttggaggcccgtatccatgagggctgtgaggagcctgcaacacacaacgctctggct
aagatctacattgacagcaacaataatcctgagcgcttcctccgagagaacccctactat
gacagccgtgtagtgggcaagtactgtgagaagagggacccccatctggcttgtgtagcc
tatgaaagaggacagtgtgaccaggagctcataaatgtttgcaatgagaactccctcttc
aagagtctctctcggtatttggtgcgccgtaaggaccccgaactttgggccagtgttttg
ttggagagcaacccatatcgaaggccactcattgaccaggttgtacagaccgcactctct
gagacccaggatccagaagaggtctctgttacagtcaaagccttcatgactgctgatctg
cctaatgagctcattgagcttttggagaagattgtcttggacaactctgtcttcagtgaa
cacagaaacctgcagaaccttctcatcctgacagccatcaaagctgaccgtacccgtgtt
atggagtacattaaccgcctggacaactacgatgcaccagatatcgccaacattgccatc
agcaatgagctctttgaggaggcttttgccatcttcaggaagtttgatgtgaacacatct
gcagtacaggttcttattgagcacattggtaatctggaccgggcctatgaatttgctgag
cgctgcaatgagcctgcagtgtggagccagcttgcgaaagctcagctgcagaagggtctg
gtgaaggaggctattgactcctacattaaggcagatgatccatcagcctacatggaggtg
ggccaggctgctgctcaaagtggaaactgggaggatttggtgaagttcttgttgatggca
cgcaagaaggcacgagaatcctatgtggaaactgagctgatctttgctctggccaaaacc
aaccgtctggcagagctggaggagtttgtcaatggaccaaacaatgcccacatccagcag
gttggagacagatgttacgatgagaagatgtatgaggcagctaagctactgtacaataat
gtgtccaactttggccgcctggcttccactcttgtccacttgggggagtaccaggctgct
gtggatggggcccgcaaagcgaacagcactcggacttggaaggaggtttgctttgcctgc
gtggatgggaaggaattccgtctggcacagatgtgcggtttgcatattgtggtccatgct
gatgaacttgaggagctcattaattactatcaggaccgtggttactttgaggagctcatc
accatgctggaggctgctctgggtctggaacgcgctcacatgggcatgttcacagagctg
gccatcctctactccaagttcaaacctcagaagatgagagagcatctggagctcttctgg
tccagagtcaacattcctaaggttttgagggcagcagagcaggctcatctctgggctgag
ctggtcttcctttatgacaagtatgaggaatatgataatgccatcatcaccatgatgaac
caccccacagatgcctggaaggagagccagttcaaagacattgtaaccaaggtggctaat
gtggaactgtactacaaagcagttcagttctacctggagtttaagcctctgttactgaat
gacctgctcatcgtgctctccccgaggctggatcacacccgtgctgtcaactttttctcc
aaggtcaaacagttgcccttggtgaaaccgtacctgcggtctgtacagaaccacaacaac
aaatcagtaaatgaagcactaaacaatctcttcataatagaggaggattaccaggctctg
cgaacatccattgatgcctatgacaacttcgataacatatctctggcccagagtctagag
aagcatgagcttatcgagttcaggagaatcgctgcataccttttcaaaggcaacaaccgc
tggaagcagagcgtggaactctgcaaaaaggacaaactctacaaggatgccatgcagtat
gcatcagagtcaaaggacacagagctggcagaggagcttctgcagtggttcctgcaggag
gacaagaaagagtgctttgctgcctgcctctttacctgctatgacctgctccggcctgac
gtggtcctggagaccgcctggaggcacaacatcatggacttctccatgccctactttatc
caggtcatgagggagtatctcagcaaggttgatgcaattaaggaaaaggttgataagctg
gatgcatctgagtccttgaggaaagaggaggagcaggccacagaggcacaacctattgtt
tacggtacaccccagctaatgctcaccgcaggccccaatgttgcagttcctcctcagcag
ccatacggctacggctacgcagcccccaccggctacgctcagccagcgcagccaggcttc
ggctacggcatgtga
DBGET
integrated database retrieval system
