Astyanax mexicanus (Mexican tetra): 103034540
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Entry
103034540 CDS
T05042
Name
(RefSeq) rho GTPase-activating protein 21 isoform X1
KO
K20315
Rho GTPase-activating protein 21/23
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103034540
Membrane trafficking [BR:
amex04131
]
Endosome - Golgi transport
Others
Others
103034540
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
103034540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGAP
PH
PH_9
PDZ_6
PDZ
PDZ_2
PH_11
Motif
Other DBs
NCBI-GeneID:
103034540
NCBI-ProteinID:
XP_049336818
Ensembl:
ENSAMXG00000032362
LinkDB
All DBs
Position
6:53166812..53364775
Genome browser
AA seq
2015 aa
AA seq
DB search
MSGASPACVLSHSERCLKPDSDRSVGECPWVCVSGADGCVSCVWLQLLTAAHWGCEGGVH
WNTLRGSSRRSCEQIRGKQKDGCDHTESCLVSPGTEEPFSWPGPKTLRLRRNSQGFGFTL
RHFIVYPPESAVHYSLKDEDNGSRGRQRNRLEPMDTIFVKQVKEGGPAHGAGLCTGDRIV
KVNGESIIGKTYSQVIALIQNSDASLELCVMPKDEDILQLFSRDITALAYSQDAYLKGNE
AYSGNARNIPEPPPICYPRIECKVSGMTQAQTSDPPAHPETSLTAGRRSNPEINYRVEIP
VPPSPPSSSQVSKTVVCVYNETGRTTVEPVEPSARSTPSHRTEEDRYAPLTPATTESASE
RPRAHTTASASTAGGSQLHHTPGRVSVPAVYAGSAPVLTQSLRPPATSTPASSPYTPSPP
SSTTSPCSPHQNIDWRNYTTYKEYIDNKRLYMYGCRTIQERLDSLRAAAGEYSKQQQQQR
EQQQEEEEPGKGANGAQIRRRSASHERSHIGTRVPLPLRSVSQEKLGGGERGTSSRDWPR
SVSQDALPLVPVGVNKPRARSCDYLSRHGDSGTDRLLQDRRTYGRTETEDRGRGCSGDTD
ARGSRQSGSLRTVSHPHRPPSTGYGGSYPGLSVTPLLSKVLSSRAESLGNTATPKPSPLS
TPSSVPADTSPASYVSSALASLHAAAATGSISGSSRGAFPELSKDQRAAAPVPNHVPPGA
HPSTITRARTESLQEPAGSGGLGVRPQKTQWTQQSRDLPMCRSFDASVLQRPVIRRQQCR
AGGREGVGIEGADATVVVLRRDKSGPPPLRHPSYIQAVNDGERGGDTPTCWLPNDARRDM
SIQRLGDQHQGSAELGDSLDSIPFIDEPSSPSVDHDNTHIPASAVICSTPVITTIPPSPT
SPTAIIRRQLSHDQDSLRLTILESDSGTKTERSKSCDEGLDNFREEGRGRSLKHLPGLRG
LRKAVDRSSEDSGSRRDSSSDVFSDATKEGLLHFRQLNSDKGKRVGSKPWKQMYAVLQGH
SLFLYKDKKEAQTHASSQTEDEPLPISIRACLIDISYSDTKRKNVLRLTTSDCEYLFQAE
DREDMLSWIRAIQENGNLDEENALITSTDLINRKIKEYNTMMSPPSSKTEQSPKASRQSL
SIRHTLLGGKGESKSQSPHSPNKEYDRKTIHKDESSPPKDKRRKGIPGLMRKPFEKKASP
GVTFGVRLDDCPPAHTNRFVPLIVEVCCKLVEERGLEYTGIYRVPGNNAAISSMQEELNK
GVGDIDVEEDKWKDLNVISSLLKSFFRKLPEPLFTNEKYSDFIDANRTEDPVERLKVLKR
LLHELPDHHYETLKFLSAHLKTVAENSEKNKMEPRNLAIVFGPTLVRTSDDNMTHMVTHM
PDQYKIVETLIQHYDWFFTEEGDEEPVTTVQQDSAVETQPVPNIDHLLTNIGRTGTSPGE
VSDSPTSDSAKSKQGSLGSGKDPCSRELVSSIFAAANRKRKKHKEKLQPSSSDDDLDAVF
SKKELPVQGQEAAEGDGSPVPAGAKHRGNEEAATTTTPKSQKEYRNSFFMRDKSLSTSSK
YSSSTSPNLTCRTVSLPKGSLSDTPSQVDEATSDLGTMSSGASVPRSRPRRWGTATPSAM
ELSPAGPTGASATAEVSSITSDYSTTSSNTFLTGAESSALSPEVQSMTESRAGDEADDER
SELISEGRPMETDSESDFPVYTSRDGATPSGLELSHALFTTPCKTDPSTAREKPDCRRLL
PSHRLIECDSLSRRRSLRQKTDSESSVEGAGAGAGTSAGTSTQGVTRSEPNRLSRVLEAM
KKGRSTGSLSSSSSRSESDRTETTPRRLKITERLKCRLRLSADDMFGIGDRKNRTPEESK
KKNIRRRHTMGGQRDFGELAVINDWREQGGGDQGAELPVSDRLKPQEVSFRDWLAGERWK
AGGSRRASKEAERLVVSSGPEVIRSGAGEELSHHGSSSVLLVSSPSPQSPQSSTEQVNGG
GPQGKSKASLNSGADSHPHKLSGAQVVRSRFYQCL
NT seq
6048 nt
NT seq
+upstream
nt +downstream
nt
atgagcggggcgtcgcctgcctgtgttctgtcccattcggagcgctgtctgaagccggac
agtgaccggtctgtgggagagtgtccgtgggtatgtgtgtccggggcggacggctgcgtg
agctgcgtgtggctccagctgctgactgcggcacactgggggtgcgaggggggggtccac
tggaataccctgaggggctcgtcccggaggagctgcgaacagatcaggggtaagcagaag
gatgggtgtgatcacacggagagctgtctcgtctctccggggacggaggagcctttctcc
tggccgggacccaaaaccctccgcctgcgccggaactctcagggcttcggcttcaccctc
cgtcacttcatcgtctacccaccggagtccgccgtgcactactcactcaaggacgaagac
aatggcagccgagggaggcagcggaaccggctagagccgatggacaccatctttgtgaag
caggtgaaggagggaggccccgcccacggagctggactctgcacaggggaccggatagtg
aaagtgaatggagagagtatcataggaaagacctattcccaagtgatcgccttgatccag
aacagtgatgcgtctctggagctgtgtgtgatgccaaaagatgaagacattttacagctg
ttctccagggacatcactgctctggcgtattcccaagatgcgtacctcaaaggaaatgaa
gcgtacagcgggaacgctcggaacatccccgagcctccgcccatctgctacccgcggata
gagtgtaaggtctcggggatgacccaggcccagacgtcagacccccctgcccaccctgag
acctccctcaccgcgggacgacgctctaatcctgagataaactacagagtggagatcccc
gtccccccctcacctccatcctcctcacaggtctccaagactgtggtctgtgtgtataat
gagacggggaggaccacggtggaaccagtggaaccttcagctcgatctactcccagccac
agaacagaggaggacaggtacgcccccctcaccccggctacgactgaatcagcgtccgag
cgtccgagagctcacaccactgcttctgcttctactgctggaggatctcagctccaccac
acccccggccgagtctcagtgcctgccgtctacgccggttcagctccagtactcacccag
tccctcagacccccagcgacctccacccccgcctccagcccctacaccccctcccctccc
tcctccaccacctccccctgctccccccaccagaacatcgactggaggaactacaccacc
tataaggagtacatcgataacaagcgcctctacatgtacggctgccgcaccatccaggag
cgtctggacagcctgagggcggcggcgggggagtacagcaagcagcagcagcagcagcgg
gagcagcagcaggaggaggaggagccggggaaaggtgctaacggagctcagatccggagg
agaagcgcatctcacgagcgcagtcacatcggtacaagggtcccgctgccgttgcgcagc
gtgtctcaggagaagctgggtgggggtgagcgggggacaagttcaagagactggccccgc
agcgtgtcgcaggacgccctgcccttggtgccggtgggcgtgaataagccgcgggcgcgg
tcctgcgattacctcagccggcacggagacagcgggacggacaggctgctgcaggacaga
cggacgtacggccggacggagacggaggacaggggacggggctgctccggggacacggac
gcacggggcagcaggcagtccggctctttacgcacagtgtcccacccacaccggcccccc
agcaccgggtacgggggcagctacccgggactgtccgtcactcctctcctctctaaagtg
ctgagctccagagcagagagtctggggaacactgccactccaaagccatctcccctctcc
accccatcctccgtacctgcagatacctcacctgcgtcctacgtctcctctgctctcgcc
tccttacacgccgccgccgccaccggcagcatcagcggcagcagcagaggcgccttccca
gagctgtccaaagaccaaagagccgccgccccagtgcctaaccacgtcccccccggcgca
cacccctccaccatcacccgggctcgcaccgagagcctgcaggagcccgccggcagcggg
gggctcggggtccgaccccagaagacccagtggacgcagcagtccagagacctgcccatg
tgccggagcttcgacgcctcggtcctgcagcggccggtgatccgcaggcagcagtgccgg
gccggcgggagggagggggtggggatagagggagcggacgctacggtggtggtgctaagg
cgggacaaatccggacccccgcccctccgacacccgtcctacatccaggccgtaaatgat
ggagagaggggcggagacacgcccacctgctggctgcccaacgacgcccggcgagacatg
agcatacagcggctcggggatcagcaccagggctcagcggagctcggagactcgctggac
tccattcccttcatcgatgagccatccagtcccagtgttgaccatgataacacccacatt
cctgcgtctgcggtcatctgtagcactccggtcatcaccaccatccccccgagccccacc
tccccaaccgccatcatccgccgccagctctcccacgaccaagactctttgcgactcacg
attctagaatcagattctggtaccaaaacagagcgatccaagtcctgtgacgagggattg
gataacttccgggaggaaggacgcgggagatcactgaagcacctccctggtctgagaggg
ttacggaaggctgtggacagatcatcagaagactccggctccagaagagactcttcatca
gacgtcttcagcgatgctactaaagagggactgctgcatttccgccagctcaactcagac
aagggcaagcgtgtgggcagtaagccgtggaagcagatgtacgccgtgctgcagggacac
tctctgtttttatacaaggataagaaagaggctcagactcacgccagctctcagaccgag
gacgagccgctgcccatcagcatcagagcctgtctgatcgacatctcctacagcgacacc
aagcgcaagaacgtcctgcgcctcaccacctccgactgcgagtacctgttccaggccgag
gaccgggaggacatgctgtcctggatccgagccatccaggagaacggcaacctggacgag
gagaatgcactgatcacaagtacagacctcatcaatcgcaagataaaggagtacaacacc
atgatgagtccacccagcagtaagacggagcagtccccgaaggcctctcgccagtctctg
agtatcagacacactctgctgggaggaaaaggagagagtaaatcccagagcccccactcc
cccaacaaagagtacgacaggaagaccatacacaaagatgagtctagcccacccaaggat
aagaggaggaaggggatcccggggctgatgaggaagccgtttgagaagaaggcctctcct
ggtgtaacgttcggagtcagactggatgactgccctcctgctcataccaacagatttgtt
cctctgatcgtggaggtgtgctgtaagctggtggaggagagggggctggagtacacaggt
atctacagagtgccgggaaacaacgcagccatctccagcatgcaggaggagctgaataag
ggcgtgggagacatcgatgtggaggaggacaaatggaaggatctgaatgtgatcagcagc
ttactgaagtccttcttccggaagcttccagagccactcttcaccaacgaaaagtactcc
gacttcattgacgccaacagaaccgaggatccagtggagcgactgaaggtgctgaagagg
ctgcttcatgagttgccggaccaccactatgagaccctcaaattcctctccgctcatctg
aagaccgtggctgagaactctgagaagaataagatggagccgaggaacctggccatcgtg
tttggacccacgctggtgcgaacgtctgacgacaacatgacgcacatggtcacacacatg
cctgaccagtacaagatagtggagaccctcattcagcactatgattggttcttcactgaa
gagggcgacgaggagccagtgaccaccgtgcagcaggacagtgcagtggagactcagcct
gtgcctaatattgatcacctgctgaccaacatcggccgcacgggaacatctccaggggaa
gtgtcagattcacccactagtgattcagctaagtctaagcagggctccttggggtcgggc
aaggatccatgcagtcgagagctggtctcctccatctttgctgcggccaatcgcaaacga
aagaagcacaaggaaaaactgcagcctagcagctctgacgatgacctggatgccgtcttt
tctaagaaagagctacctgtccagggtcaggaagctgccgaaggagacggcagtcccgta
ccggctggagcaaagcaccgtgggaacgaagaagcagcgacgacgacgacacccaagagc
caaaaagagtacaggaactctttcttcatgagagacaagtctttgtcaacctcttcgaaa
tactcctcctccacctcgcccaacctcacctgccgaacggtgtctcttcctaaaggctcc
ctgtccgacacgccctcccaggtcgacgaggctacctcagacttgggtaccatgagctct
ggagcctcggtccccagaagcaggcctaggagatggggtacagcaacgccctcagctatg
gagctttctccagcagggcctacaggagcttcagccactgcagaagtgagctccatcacg
tcggattactccactacgtcctccaacaccttcctgacgggagcagagtcgagcgcactc
agtccagaagtgcagtcgatgaccgagagccgggctggagacgaagccgacgacgaacga
agcgagctgatcagcgaggggcgaccgatggagaccgacagcgagagcgacttccctgtt
tacaccagtcgagatggagcgaccccttctggtttggaattgtcgcatgccttatttacc
acgccttgcaaaacagacccttctacagccagggagaaaccagactgtcgccggctgctg
ccatctcataggctgattgagtgcgactcactctctaggagacggtccttgaggcaaaag
acagacagcgagtcgtccgtggaaggtgccggagctggagctggaaccagtgctggaacc
agcactcaaggagttacccgaagtgaaccaaaccgtttgtctcgtgtcttggaagccatg
aagaaaggtcgctctactggaagcctgagctcgtcctcgtcacgcagcgaatcagatcga
actgagacgacgcccagacgtctcaagatcacagagaggctcaagtgcagactacgcctt
tccgccgacgacatgttcggaatcggggatcgaaagaaccgcacgccggaggagtccaag
aagaagaacatccgccgacggcacaccatgggtgggcagagggattttggagagttggcg
gttattaatgactggagggagcagggtgggggcgaccagggtgcggaactgcccgtcagc
gaccggcttaaaccacaggaagtctcttttcgagactggttagctggtgagcgctggaag
gctgggggttcccgcagggctagcaaagaagcagagcggcttgtggtgtcatcaggtcct
gaggtcatcaggtccggggctggagaggagttaagtcatcacggttctagctcggttctt
ctggtttccagtccgagtccccagagtccacagtccagcacagagcaggtgaacggggga
ggaccacagggcaagagcaaagccagcctgaactccggcgctgactcgcatccgcacaaa
ctctccggagctcaagtggtccgttcccgattctaccagtgtctatga
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integrated database retrieval system
