Astyanax mexicanus (Mexican tetra): 103034716
Help
Entry
103034716 CDS
T05042
Symbol
npas4b
Name
(RefSeq) neuronal PAS domain-containing protein 4B isoform X1
KO
K26457
neuronal PAS domain-containing protein 4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103034716 (npas4b)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
103034716 (npas4b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
bHLH_NPAS4
PAS_3
PAS_11
HLH
PAS
Motif
Other DBs
NCBI-GeneID:
103034716
NCBI-ProteinID:
XP_022531783
Ensembl:
ENSAMXG00000006085
LinkDB
All DBs
Position
17
Genome browser
AA seq
876 aa
AA seq
DB search
MYRSTKGASKARRDQINAEIRNLKELLPISDSDKSRLSYLHIMSLACMYTRKSVFFSEDP
SEASHHEGSGTLLSMPEISELVHTLPGFLVVLTSEGKLLYLSDNVAEHLGHSMVDLVAQS
DSVYDIIDPTDHFTMRSNLVPVTTPETERLFRCRFNTSKFVRRQGSGNKVTLVRARCVPS
PFHASSYWMSNPVWVCFCSPLEQAPQSSTTRNPLPTPPAEQAFLLACFQSQHSRDMRVEA
AQDCVSVYLGYDVDTLRSRSWYSLVHPRDLSHASAQHCTLLREGGERQVEMVVQVEAADH
SWVWLYMVLQLQNGEHPIACQNYVISESEAWSVRQQLCSEQNQLSLLYQEGMVQQCSEPS
LSSPEQVFTPSSSGLSTQSFDFSFAASGRSSSEELPSGTASLPMGSAPCPTFPLEDDSFS
QQLERHQMWLPDTTKFSTTPSATVPPSQPQSHMSSLAGLSHTVGNSQAPVPPVHPPHIHN
LPKRASMGELVCTPPYTPRFGGGRFMFGEELFKPDSTASAVMSSSSQITQTMQSASHPAS
LSTGTGLALSVQHCRRRLYEKQPLTPDSPDTDKCILMALPEIRGPLYVDLPHAVHHGPPE
GLLTPEASPTEHPCQAFFNQTIDNEQEQLEISLLAQYLSSVAEGFCQDCPPATRTPSPVL
PQQPLLTQNHIEVASSSSCIKTPPTMCWRDTHSPQVQDKSSLFEERLLPVVPSSSTSSTS
SPNPSSPPAHPPPAPVSICSPGHPQEEALVGVHHLCSVQLTHRNSVTGGRLLEPELTNEG
EAFTESEMDMELLPPELTAAVSASPESTTGPALPDFTPGLACAQSLLEELVNMEPVFEAT
APITPALRQQPELYQLPLQESPQHFYQGENHRIVSS
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgctccaccaaaggagcgtctaaagcgcggagggatcagatcaacgccgagatc
cgcaacctgaaggagctgctgcccatctcggactcggacaagtcccgcctgtcctacctg
cacatcatgtccctcgcctgcatgtacaccaggaagtccgtcttcttctctgaagatcca
agcgaggcatctcatcatgaaggaagtggaacgttgctttctatgcctgagatctctgag
cttgtgcacaccttaccaggctttctcgtggtgctaacaagtgaaggcaaactcctgtac
ctctcagacaacgtcgcagagcacttgggccactctatggtggatctggttgctcagagt
gacagcgtctacgacattatagatcccactgaccacttcaccatgaggagcaatcttgtg
ccagttaccacacctgagacagagcgtctctttcgctgtcgcttcaacacttcgaagttt
gtgaggaggcagggctctgggaacaaagtgactctggtgcgagcccgctgtgtgccgtca
cctttccacgcatcctcctactggatgtccaacccggtgtgggtgtgtttctgctcacct
ctagagcaggcaccacaatcttcaaccaccaggaaccctctccccaccccacctgcagaa
caagcctttctgcttgcctgcttccagtctcagcacagccgggacatgagggtagaggcg
gctcaggattgtgtgagtgtgtacctgggttacgatgtggacacactgcgctctcgctcc
tggtatagcctggtgcatcctcgtgatctatctcacgcctctgcacagcactgcaccctg
ctgcgtgaaggaggggaaaggcaggtggagatggtggttcaagtggaggcagctgaccac
tcttgggtgtggctttacatggttcttcagctccagaatggagaacatcctatcgcctgc
cagaactatgtcattagtgaatctgaagcatggtcagtgcgtcagcagctctgctctgag
cagaaccagttgtccctcctgtaccaggagggtatggttcagcagtgctcagagccatcc
ttgtcaagtccagagcaagtattcactcccagcagcagcggcctgtccacccagtccttc
gacttcagcttcgctgcctctggtcgcagttcctcagaggaactgcccagtggcaccgcc
agcctgccaatgggctctgcaccctgccctaccttccctctggaagatgacagcttctcc
caacagcttgaaagacaccaaatgtggttacctgacaccacaaagttctccacaacaccc
agcgcaactgtccctccctctcaaccacagagtcacatgtctagtttggcaggtctttca
cacacagtaggtaatagtcaggctcctgttcctcctgtgcatcctccccacattcataac
ctgcccaaacgagccagcatgggggagctggtttgcactcccccatacactccaagattt
ggaggaggtcgattcatgtttggcgaggaactctttaaaccagactccactgccagtgca
gtgatgagttcctcaagtcaaataacccaaaccatgcagtcagcaagtcacccagcatcc
ctctcaacaggcactggtctggcactctctgtacagcactgccgtaggcgtctctatgag
aaacaacctctcaccccagacagtccagacactgacaagtgcatcctcatggcattgcca
gagataagagggccactctacgtagatcttccacatgcagtccatcacggtccccccgag
ggcctcctaaccccagaagcttctcccactgaacacccctgtcaggctttcttcaaccag
acaattgacaatgaacaagagcaactagaaatctccctcttggctcagtatctcagttcc
gtagcagagggtttctgtcaagactgcccacctgcaacacgcaccccatcccctgtactt
ccccaacagcccttactcactcagaaccacatagaggtagcatcgtcatcttcttgcata
aaaacgccacccaccatgtgctggagggacactcactcaccacaagttcaagacaaatcc
tctttatttgaagaaagacttctacctgttgtcccatcctcctccacctcttccacctct
tctcccaatccctcctctcctcctgctcatcctcctcctgccccagtgagcatctgctct
cctggacatccacaggaggaggctttagttggtgtgcaccacctctgtagcgtccagttg
acgcaccgtaacagcgtaaccgggggcaggctgttggagccagagttgaccaacgaggga
gaggctttcaccgagagtgagatggacatggagcttctgcctccagagttaaccgccgct
gtctcagcctctccagagtcaaccactggcccggcacttcctgacttcacccctggccta
gcctgtgcccagtccctcctggaggagctggtcaacatggaacctgtgttcgaggcaacc
gccccgattactcctgccctgaggcaacaacctgagttgtatcaactccctcttcaggag
tcgccacagcatttctatcaaggtgagaatcatagaattgtgagctcctga
DBGET
integrated database retrieval system
