Astyanax mexicanus (Mexican tetra): 103034841
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Entry
103034841 CDS
T05042
Symbol
usp43a
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 43a
KO
K11856
ubiquitin carboxyl-terminal hydrolase 43 [EC:
3.4.19.12
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
amex01002
]
103034841 (usp43a)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
amex04121
]
103034841 (usp43a)
Enzymes [BR:
amex01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
103034841 (usp43a)
Peptidases and inhibitors [BR:
amex01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
103034841 (usp43a)
Ubiquitin system [BR:
amex04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
103034841 (usp43a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Ribosomal_60s
Ipi1_N
Motif
Other DBs
NCBI-GeneID:
103034841
NCBI-ProteinID:
XP_007257247
UniProt:
A0A8B9LXT1
LinkDB
All DBs
Position
5:26732822..26809802
Genome browser
AA seq
1208 aa
AA seq
DB search
MEERESPEPGKNSTRARRKPKRAKEKKRKARRLFRGKSFRSVSRFMSRVFKNLGGFGTQP
GDGQKKQEKGQIEKQEEEEGEEEEEEDDGGFGESAKRALGRTNELTLKRGSTRSCPPALS
WASGEKPPGVQGLRNHGNTCFMNAVVQCLSNTDLLAEHLGLGQYKSELRDRPAGGGAWRE
AGQKSQRGQSGQGAQGEVTEQLALLIRALWTQQYTPQLSVDFKNAVSKHGSQFKGNFQHD
ALEFLLWLLDRVHEDTNQDSSSTSNNINDTISNGSSNSSKVKATSKGHAESSSGPDLQQA
RTRHSFVQEHFQAQYRSSLTCPHCFKQSNTFDPFLCISLPIPLRQTRALNIILVFSSKSQ
RFVRVGLAVPLLGSVHTLRALLAQEGNTSPEQVILVELYSNGFQRSFSNDDDMTSISESD
VIYAFQAPPSFSRGSSSRCSGLHHSLPSSPYNPGPEGQRSLASGTLSSEFLNQSASSKIL
LLICNTAGSGQQAARFGPPMLVCEERSLSWAELQQSILSKLFYLMLNGTQGQNASALFRI
RVVGGSTSCSYLSPQDSRPLSHPAVDRALKLCGPGGPPHVKLVIEWETKVKECLFGSIQE
ECVKDAESVREQQQNHLQQHSCTLDECFQLYTKEEQLAPDDAWKCPHCKQLQQGMLKLSL
WTLPDILILHLKRFRQVADRRNKLSTLIRFPQNGLDMAPHVAKRSQSSRNPAPCPPTWTH
GDSDFLYDLYAVCNHHGGMHGGHYTAYCRNSVDGQWYSYDDSSVDLVPDEELCTRGAYIL
FYQRRNAIPPWSANSSVRGSTSSSVSEHWLMRLNGDSKRGSMVSRSSTTCPSIPDSPDSP
IFKDEALKHEKVSLGGFETRPFIRGLQGRSVSMKSPTKPKEHTSKLFPLRWSFGSKDKRK
PTATAASTAPAAPSATAAPPAPAVTTATTSSSAPVQLVEYLESGRRPRCTNDPIATLVGT
SSIKETPQGQKTPEGQKGLHDSPRVAEGQQRPGQRTGQKEDGTLTRRSSRRSKQDPARAS
NPQKQRNSSLGYPASGGSLLRKSKTAVDTLLVDEIEGSRVDDTKVPDGIMAFLRGGFLKK
DPRRRSCEAELTEDGVPGERSTSRLSLPSRSHTMNTSRTTNGIKAQLGDELANGRAVDIK
RSQSSSSIPRRTGGNPQRAMSLQRNGAPGVQRNSGGEKYSHGSLQRTQTRHSSSSTLGRR
RAVPESSF
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggaggagagggaaagtccagaacccgggaaaaactccacgcgcgccagaaggaaaccc
aagcgcgcgaaggagaagaagcgcaaagcgcgcagactcttccgaggcaagtctttcaga
tccgtcagcaggtttatgagcagggtcttcaagaatctggggggcttcgggacgcagccc
ggggacggtcaaaagaagcaggagaagggacagattgagaagcaggaggaggaggaaggg
gaagaggaagaagaggaggatgacggagggtttggagaaagcgccaagcgcgcgctggga
cgcaccaacgagctcacgctgaaacggggcagcacgcgctcctgcccccccgcgctgagc
tgggcgagcggagagaagccccccggagttcaggggctgaggaaccacgggaacacgtgt
tttatgaacgccgtggtgcagtgcctcagcaacaccgacctgctggcggagcacctgggc
ctgggccagtacaagagcgagctgcgggaccggccggcgggcggaggcgcgtggagggag
gcggggcagaagagccagcggggtcaatcgggtcagggggctcagggggaggtcacggag
caactggccctgctgatcagagctctctggacccaacagtacaccccccagctctcagtg
gacttcaagaacgctgtatccaaacatggttcccagttcaaagggaatttccagcacgat
gctctggagttcctcctgtggctcctggaccgagtgcatgaggacaccaaccaggactca
tccagcacctccaacaacataaatgacaccattagcaatggttccagtaacagcagcaag
gtcaaggcaactagcaagggtcacgcagagtcttcatccggtccagacctgcagcaggcc
agaaccagacacagcttcgtccaggaacacttccaggcccagtacaggtcatctttgacc
tgtccacattgctttaaacagagtaatacctttgaccctttcctttgcatttcccttcct
ataccactgcgacagaccagggctctgaacataatcctggtgttcagcagtaagtctcag
cggtttgttcgtgtgggtctggctgtgcctctgctgggatcagtacacacactcagagca
ctacttgcccaggaaggcaacaccagcccagaacaggtaattctggtggaactgtactcc
aatgggttccagcgttccttctccaatgatgacgacatgaccagcatctccgaaagtgac
gtcatctatgctttccaggctccaccctccttctccagaggcagctcctcacgatgctca
gggctccatcactctctcccctcctctccatacaacccaggacctgaaggacaaaggtcg
ctggcctcgggcactttatcatcagagtttctgaaccagagtgcatcctccaaaattctc
ctcctcatctgtaacacggcagggagcggacagcaggcggccaggtttggtcctccgatg
ctggtgtgtgaggagaggagtttgtcgtgggcggagcttcaacagagcattctcagcaaa
cttttctatttaatgcttaacggtacacaagggcagaatgcgagtgcgttatttcggatc
cgagtggtgggtggatccacctcctgcagttatctctcgcctcaggacagccggccgctt
tcgcatccagcagtggaccgagctttgaagctgtgtggtcctggaggtcccccacatgtg
aagcttgtgattgaatgggaaacaaaagtcaaagaatgtttgttcggcagtattcaggag
gagtgtgtaaaggatgctgaaagtgttcgtgagcagcagcagaatcacctgcagcagcac
agctgtacactggatgagtgttttcagctctacaccaaagaggagcagttggctccagat
gacgcatggaagtgtcctcactgtaagcagctgcagcagggcatgctgaagctcagtctg
tggaccctgccggacatcctgatcctgcacctgaagcggttccgccaggtcgctgaccgc
aggaataagctctccaccctaatcaggttcccccagaacggactggacatggcgccccac
gtggccaagcgcagtcagagcagccgaaaccccgccccctgccctccaacctggacacac
ggagactccgattttctgtatgacctttatgctgtgtgtaatcaccacggggggatgcac
ggcggacactatacagcgtactgcaggaactcagtggatggccagtggtacagttatgat
gacagcagtgtggatctggtgccggatgaggagctgtgtacgcgaggagcatatatcctg
ttctaccagcgcagaaacgccatcccaccgtggtccgctaacagctccgtcaggggttca
acaagttcgtcagtgtcagaacactggctgatgcgtctgaacggagacagtaagaggggc
agtatggtctcccgctcctccaccacctgtccctccatccctgactctcctgactcgcct
atattcaaggatgaagccctgaagcatgaaaaggtttcattaggaggttttgagacgagg
ccttttattcgagggctgcagggacgcagcgtaagcatgaaaagccccaccaaaccaaag
gaacatacaagcaaattgtttccacttagatggtctttcggctccaaagacaaacgcaaa
cctactgccactgctgcttctactgcccctgctgccccttctgccactgctgctcctcct
gcccctgctgtcactactgccactacttcctctagtgccccagtgcagctggtggagtac
ctggagtcgggcaggagaccccgatgcaccaacgaccccatcgctactctggtaggcaca
tcttccatcaaggagaccccacaaggtcagaaaaccccagaaggtcagaagggtctccac
gactccccacgggtggctgagggtcagcagcggccagggcagagaaccggacagaaggag
gatggcaccttgacgagaagaagcagtagaaggtctaaacaggatccagcaagagcctca
aacccacaaaagcagcggaactccagcttgggctacccagcttcaggagggtcactcttg
cggaaaagcaagacagcagtggacacgctcctggtggatgagattgaaggcagcagggta
gatgacactaaggttcctgatggcatcatggccttcctgagaggtgggtttctaaagaag
gacccccggcgaagatcttgtgaagctgagctcacagaagatggcgttcctggggagcga
agcacatcccgactctcgctgccctccagaagccacaccatgaatacaagcagaacaacc
aacggcatcaaagcacagctgggagatgagttggccaatggcagagcggtggatatcaaa
cgctcacaaagttcttccagcatccctcgcaggactggagggaacccacagagagcgatg
tcactgcagaggaacggagcccctggggtccagaggaactccggtggagaaaagtactcc
catgggtcactgcagagaacacaaacccgtcacagtagcagctccacactgggccgaaga
agagccgtgcctgaatccagcttctga
DBGET
integrated database retrieval system
