Astyanax mexicanus (Mexican tetra): 103035009
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Entry
103035009 CDS
T05042
Symbol
ppfibp2b
Name
(RefSeq) liprin-beta-2b isoform X1
KO
K27096
liprin-beta
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103035009 (ppfibp2b)
Membrane trafficking [BR:
amex04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
103035009 (ppfibp2b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
ADIP
DUF16
FxsA
AAA_13
DUF6825
Filament
LRRFIP
Motif
Other DBs
NCBI-GeneID:
103035009
NCBI-ProteinID:
XP_049340411
LinkDB
All DBs
Position
10:complement(5096160..5196885)
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AA seq
1040 aa
AA seq
DB search
MATDASHMLEAALEQMDDIIAGSKAVVEFSNGLYDIGSPVSAGPLQVLQLAEELRVALEL
QAGDEGRGTLRSQLPCSTAQTLLDWLEKGTVNLQSPPNNETYQERLERLEGDKESLVLQV
SVLTEQVEAQGEKIRDLEVSLEEHHHKLVSTEEMLQQELLSRTSLETQKLDLMDEVSYLK
LKLVSMEEEHGHMDGDDKQHKAECVVNVISELQEQMRKFQQEITTRIQEQRALEAQGAEA
CRQERDRSPDVGLGSSDVEDCSCRCRAGGENQALQQELRLLKTKVDELESEKSQYERKLK
ATKAEISELQQLLGSKDAEIESLQSQLLSRGNMSNDSLDREEVYRRKLKDKYLELQRMKI
GMESLLAANDEKDRHIEELTALLAQYRKAKDMMVLSRAVCGDRLLCASSEEDLSGSLRLR
PITHKAHSDIVRSDLQMSTPRGSSPLLLPPACLQNNLESNYRSLGISMENSMMYPSDTSF
HNGQWSTPRMLSSSLEELQSGSKHRHAMMQPVEPVLETRHVSDGSKYRTLPGKFYRPDQN
GDRDQYSSPLQLSPDESEDSAVNLNRCRSASAPALGKTEKADESTLSDLSPLSSGVDSGH
QSPVSPENKKNQKGIRKLWGKIRRTQSGSLPADSADLKRGGFRSTAGPRLACMSTADSAR
HANIPFSKWSCDQVCVWLEDYGLGQYTPMAKQWVSSGQTLLSASLHDLEKELGMKHPLHR
KKLQLALHSFSTKLGEKSADLDYVWVTRWLDDIGLPQYKDQFHEGRVDGRMLQYLTVNDL
LILKVSSQLHHLSIKSAIHVLHVNKFNPNCLKRRPGDEAHIQSTPSEVMQWSNHRVMEWL
RSVDLAEYAPNLRGSGVHGGLIILEPRFNSDTLAMLLNIPPQKTLLRRHLATNFASLVGA
QAQQEKQEYVESAGYTPLSTTAKVRPKKLGFSNFGHLRKKRPDDSTDYICPLEAAQAQAL
LNGAQRPYTGFRGLSPILDRDPEKREQTLMTKGAVLQIEALSEGINHLTEPKEEKTEPAG
GCLSPNTKQRLILCIRETTL
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atggccacggacgccagtcacatgttggaggcagccttggagcaaatggacgacattatt
gcaggctctaaggctgtggtggagttcagtaatggcctgtatgatattggctctccggtc
agcgctggtcctctgcaggtgctgcagttggccgaggagctccgcgtggctctggagctg
caggctggagacgagggccgggggacactgcgctcccagctgccctgttccaccgcacag
accctgctggactggctggagaaaggaacggttaacctccagtcccctccgaacaatgag
acgtaccaggagcggttggagagattagagggggataaagagtctctggttctgcaggtg
agtgttctgacggagcaggtggaggcacagggagagaagatcagagatctggaggtctct
ctggaggagcaccaccacaaactcgtctccactgaggaaatgctccaacaggagctcctg
agccgcacctcactggagacgcaaaagctggatttgatggatgaagtttcgtatctgaag
ctgaagctggtcagtatggaggaggaacacggacacatggatggagatgataagcagcac
aaagcggagtgtgtggttaacgttattagcgagctccaggagcagatgcgtaagttccag
caggagatcaccactcgtatccaggagcagcgagccctggaggctcagggagccgaggcg
tgtcggcaggagcgcgaccgcagccccgacgtgggcttgggctcgtcggacgtcgaggac
tgcagctgccgctgtagagccgggggagagaaccaggctctccagcaggagctgcggctg
ctgaagaccaaagtggacgagctggagagcgagaagtctcagtatgagaggaagctgaaa
gccaccaaggctgaaatctctgagcttcagcagcttctgggctccaaagatgctgaaatc
gaaagtctccagagccaacttctgtccagaggaaacatgagcaatgacagcttagacaga
gaggaggtgtacaggaggaagctgaaagacaaatatctagaacttcagagaatgaaaatc
gggatggagtctctgctagcagccaatgatgaaaaggatcgtcacatagaggagctcaca
gcactgctggctcagtacagaaaagccaaggacatgatggtcctctcccgagcagtatgt
ggtgatcgtttattgtgtgccagcagtgaagaggacctgagtggatctctgagactacga
ccgattacccataaagcccactcagacatcgtccgctctgacctgcagatgtcgacacct
cgaggatcctctccacttttactgcctccagcatgcctgcaaaataacctggagtccaac
tatcgcagtttggggatctccatggagaattctatgatgtaccccagtgacacaagcttt
cacaacggacaatggtcgacaccaaggatgctctccagcagtctggaagagctgcagagt
ggatctaaacacaggcatgcaatgatgcaaccagtagagcctgttctagagactcggcat
gtttcagacggcagtaagtaccggactctgccgggaaagttttaccgtccggatcagaat
ggagacagggaccagtactcgtctccactccagctctcacctgacgagagtgaggacagc
gcggtgaacctgaaccggtgcaggagtgccagcgccccggcgttaggaaagacagagaaa
gccgatgagtctacactgtcagatctgtcgccgctgtcctcaggcgtggactcagggcat
caatcaccggtttctccagaaaacaagaagaaccagaaaggcattcggaagctgtgggga
aagatcagaaggacgcagtcgggcagtcttcctgcagacagtgcagatttaaagagggga
ggtttcagatctaccgcaggtcctcgactcgcctgcatgagcactgcagactctgcacga
catgcaaacattcccttctctaagtggtcatgtgatcaggtgtgtgtgtggctggaggat
tatgggttgggacagtacacccctatggccaaacagtgggtcagcagtggccagactctc
ctctctgcctccctgcatgacttggaaaaggagctcgggatgaagcacccgctgcacagg
aagaagctgcagctggccctgcactccttcagcaccaaactgggggagaaatctgcagac
ctggactacgtctgggtcacgcggtggctggatgacattggtttgccgcagtataaagac
cagttccatgaaggtcgtgtggatgggaggatgctgcagtacctgacagtgaatgacctg
ctgatcctgaaagtgagcagtcagctccatcacctgagtattaaaagtgctatacatgtg
cttcacgtcaacaagttcaaccccaactgcctgaagaggaggccgggggatgaggcacac
attcagtcgaccccctctgaagtgatgcagtggtctaatcacagagtgatggagtggttg
cgatcagtggacctagctgaatacgcacccaacctgcggggcagcggtgtgcacggaggc
ctcataatcctggagccacgctttaactcggacacgctggccatgctgctgaacatccct
ccacagaagaccctgctgaggagacacctggccaccaacttcgcatcgctggtgggagcc
caggctcagcaggagaagcaggagtacgtggagtctgcaggatacacgccgctctccacc
acagctaaagtccggccaaaaaaactgggcttctccaatttcggccacctgcgcaagaaa
cgtccagatgactccacggactacatctgccctctggaggcagcccaggcccaggctctg
ctgaacggagcccagcggccctacacgggcttcaggggcctcagccccatcctggaccgg
gaccctgagaagcgggaacagacgctgatgacaaaaggagcagtgctgcagatagaagct
ctatcagaaggcataaaccacctcacagagcccaaagaggagaaaacagagccggccgga
ggttgtctgtccccgaacaccaagcagagactgatactgtgtataagagaaacaactctt
taa
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integrated database retrieval system
