Astyanax mexicanus (Mexican tetra): 103035014
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Entry
103035014 CDS
T05042
Symbol
rapgef1a
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04510
Focal adhesion
amex04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103035014 (rapgef1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
103035014 (rapgef1a)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Motif
Other DBs
NCBI-GeneID:
103035014
NCBI-ProteinID:
XP_049341782
Ensembl:
ENSAMXG00000009910
LinkDB
All DBs
Position
12:complement(1309388..1346998)
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AA seq
1120 aa
AA seq
DB search
MSGKTDSKQDSQRSHLSSFTMRLIDKFHSPKTKRTPSKKTSKPPIERSVKNPEQQITKVQ
NNNRLDDQEKEVVSALRYFKTIIDKMAVDRKVLEMLPGSASKVLEAILPLAHLDPKVQNS
SSVSSCLSRVYKSLGNLIRWSDQVMLEGINLEEKETIGTVTTIIKAVLDSVKELVKLVEE
KQEHPSPTSPKPKPVPPITTSDSVPEPPVIETEDESLTNSSALSRSTEVLTDPPSAEETA
PPKPPLPGLKVPEHCPPALPPKKRQPAQSPPRVAVVAPMSRTTSGSSLPIGICRQNYDVD
ALQRRFSGGSHSYGGESPRGSPCGSMGKLSKSDEQLSSLEQDSGQCSRNTSCETLDTAES
CDPDYDFLSQDLSNVDQIPLPAGGCLSPLPESHRESSSSPSQVSYGSPSLHPLVSPHQTH
IIAPPALPEKKRRSGNPPTPFDGLTSRSHFERLYSQYDNVPDDEMQVPPFPLFTPIATVS
PCSPAAFGTDFIPSENDHIPLSPPPLPEKKSKNILKYMQFMEDYSEPQPSVFYQTPQSES
IYEQRNKHLQEVYGFNDSFSSSDSVHEPLPPPALPPKQRQLASSHSASPSSSSSSSLSCH
LQQCAGGLGSAEVDAALSLSVSSSSLGCQVSSPAHGSQNASDEGGEGEYVNLYSSSQAGG
DLPLSNGDPGCGAEDSLQDSASDHGKDQNNSDSWKQKCADSELSSEELDELSLVDHDEIM
ARITLKQETDDGPDVRAGSGDILLVHATETDRKDLVLYCEAFLTTYRTFLTPEDLIKKLH
HRYTRFSHSSDSVKKRVSKNTFFVLVRVVDELCLVELTEDILKHLMELVFSLVCHGELSL
ARILRKNILHKVEQKKLLNYTNSLKTLAARGVAARPGTLHDFRSHEIADQLTLLDAELFY
KIEIPEVLLWAKEQNEEKSPNLTLFTEHFNNMSYWVRSLIIQQEKAQDREKLLLKFIKIM
KHLRKLNNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRAALADV
EPPCIPYLGLILQDLTFVHLGNPDFFEGKVNFSKRWQQFNILDSMRRFQQVHYDLKHNDD
IVSFFNDFSDHLAEEALWELSLKIKPRNITRRKTEREEKT
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaagaccgacagtaagcaggactcccagcgctctcacttgtcatccttcacc
atgaggctgatcgacaaatttcattcccccaagaccaagaggacgccttcaaagaaaaca
tctaaacctccgatcgagagaagcgtcaagaaccctgagcagcagattactaaggttcag
aataacaatcggttggacgatcaggagaaagaggtggtcagtgccttgcgatacttcaag
acaataatagataagatggcggtggacagaaaagtcctggagatgcttccaggttccgcc
agtaaagtactggaggctattctgcctctggctcatcttgaccccaaagttcagaacagt
tcctcagtgtcgtcctgcctgagccgagtctataagagtttggggaatctgattcgttgg
tctgatcaggtgatgctggagggaataaacctggaggagaaggagacaatcgggactgtc
acgaccatcatcaaagcagtgctggatagcgtgaaggaattggtgaaactggtggaggag
aaacaggagcacccgtccccgacctcgcccaaacccaaacctgtgccaccaatcaccact
tcagacagcgtcccagagccccctgttattgagacggaggatgagagcctgacgaactcc
tccgccttgagccgctccaccgaggtcctgaccgacccgccctccgccgaggagaccgct
ccccccaagccgccgctgcccggactcaaagtacccgagcactgtcctcctgctcttcct
ccgaagaagcggcagccggcccagtctcctccgcgagtcgcggtcgttgcgccaatgagc
cgcaccaccagcggatccagtcttcctattggcatctgcagacagaattatgatgtagat
gctctgcagaggcggttttctggagggagtcattcttacggaggggagtctccgcgaggc
tctccctgcggcagcatgggaaaactcagcaagtcggacgagcagttgtcttctctggag
caggacagcggacagtgctctcgcaacacgagctgtgagacactagatacggcagagagc
tgcgatcccgactacgacttcctcagccaggatttatccaacgtggatcagatccctcta
cctgcgggaggttgtctcagccccttacctgaatcccatcgggagtcttcctccagtccc
agccaggtttcctacggctctccgtctctccatccactcgtttctcctcatcagactcac
atcatcgcacctcctgctctgccggagaagaagcggcgtagcgggaaccctcccacccct
ttcgacggcctgacgtctcgctctcacttcgagcgtctctattcgcagtacgataacgtc
cctgatgacgaaatgcaggttcctcccttccccctgtttacacccatcgccacagtatcg
ccctgcagccccgcggccttcgggacggacttcatcccgtctgagaacgatcacatccct
ctgagtcctccacctctgcctgagaagaagagtaaaaacatcctgaagtacatgcagttt
atggaggattactcggagccgcagccgtccgtcttctatcaaacgccgcagagcgagagc
atctacgagcagcgcaacaaacacctacaggaagtgtacggcttcaacgactcgttcagc
agcagcgactcagtgcacgagcccctccctcccccggcacttccacccaaacagaggcag
ctggcctcctctcactctgcgtctccttcctcgtcctcctcttcctctctgtcttgccac
ctgcagcagtgtgctggcgggctgggttctgctgaggtggacgctgcgctcagcctgtcc
gtctctagctcctctctgggttgccaggtctcttctcctgctcacgggagccagaatgct
agtgatgagggtggcgagggtgagtacgtcaatctgtattcatccagccaggccggcggg
gacctgccgctctctaatggagaccccggctgtggagcagaggactcgctccaggattca
gcttcagatcacggcaaagaccagaacaactcagacagttggaagcagaagtgtgcagac
tcagagctgagttcggaggagctggatgagctgtctctggtcgaccacgatgagatcatg
gctcgcatcacactaaagcaagagactgacgatggtcctgatgttcgagctggatcaggg
gatattttattagttcatgccacagaaacagatcgtaaagatctggttctatactgtgaa
gctttcttgacgacgtacagaacgtttctaaccccagaggacctcattaagaagctccac
catagatatactaggttttctcacagttctgacagtgtcaaaaagcgagtcagcaaaaac
acgttctttgtgctggtgcgtgttgtggatgagctgtgtttggtggagctgaccgaagac
atcctgaagcatctgatggagctggtgttcagtctggtgtgtcacggggagctcagtcta
gctcggattctccgcaagaacatcctgcataaagtagagcagaagaaacttctgaactac
acaaactcgctgaagacgctggcggctcgtggtgtagcagccaggccaggaacacttcac
gacttccgcagccatgagatcgcagatcagctcactctgctggatgcagaactgttctac
aaaatagagattcctgaggttctgctttgggcgaaagaacagaatgaagagaagagcccc
aatcttaccctgtttacagagcacttcaacaacatgtcttactgggtgcgctccttaatc
atccagcaggaaaaagcccaggaccgggaaaaactcctcctcaaatttataaaaattatg
aagcacttaagaaaactgaataactttaactcctacttggccattctgtctgcgctggac
tctgcaccaatccggaggctggagtggcagaaacaaacctcagagggtctggaggaatac
tgcactttaatcgatagctcctcctccttccgggcgtacagagcagcgctggcggacgta
gagcctccctgcataccctacctaggtctgatcctgcaggacctgacctttgtgcacctt
ggtaatcccgacttctttgaaggaaaggtgaacttctccaagcgctggcagcagttcaac
atcttggacagcatgcggcgcttccagcaagtgcattatgacctcaaacacaatgatgac
atcgtgtccttcttcaacgacttcagtgatcatctggcggaggaggcgttatgggagctc
tcactgaagatcaagcctcgcaacatcacccgccgcaaaacagagcgcgaggagaagaca
tag
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integrated database retrieval system
