Astyanax mexicanus (Mexican tetra): 103035082
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Entry
103035082 CDS
T05042
Symbol
nelfcd
Name
(RefSeq) negative elongation factor C/D
KO
K15181
negative elongation factor C/D
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103035082 (nelfcd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amex03021
]
103035082 (nelfcd)
Transcription machinery [BR:
amex03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
NELF complex
103035082 (nelfcd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TH1
DUF4817
Motif
Other DBs
NCBI-GeneID:
103035082
NCBI-ProteinID:
XP_022519445
Ensembl:
ENSAMXG00000006740
UniProt:
W5KH51
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Position
5:43670488..43680618
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AA seq
576 aa
AA seq
DB search
MDEEYYSGSGEWDGNVDGYVMDAEANGKIQEDCLQKFSSRDYIMEPTVFNTLKTYFQAGG
SPEHVIQLLSENYSAVAQTVNLLAEWLIQMGVEPAQVQERVENHLKSLLIKHFDPQKADS
IFTVEGETPAWLEQMIAHTTWRDLFYKLAEAHPDCLMLNFTVKLISDAGYQGEITSVSTA
CQQLEVFSRVLRTSLSTLLDGGEQNLEKNLPEFAKMVCHGEHTYLFAQAMMSILAQEEQG
GSTVRRIGQEVQKCALQSGHDASQITLALGTAAVYPRACQALGAMLSKGALNPADITVLF
KMFSSMDPPPVELIRVPAFLDLFMQSLFKPGAKINQDHKHKYIHILAYAASVVETWKKNK
RVSINKDELKSTSKAIDTVHNLCCNENKGATELIAELGTLYQCIRFPVVAMGVLKWVDWT
VSEPRYFQLQTDHTPIHLALLDEISTCHQLLHPQVLQLLVKLFETEHSQLDVMEQLELKK
TLLDRMVHLLSRGYVLPVVSYIRKCLEKLNTDISLIRYFVTEVLDVIAPPYTSDFVQLFL
PILENDSIAGTIRTEGEHDPVAEFIAHCKSNFIMMN
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggagtattacagcggttcgggagagtgggacggaaacgtggacggatatgta
atggatgcagaagcaaatgggaagatccaggaggactgcctccagaagttctccagcaga
gactatatcatggagcctacagtctttaacacattaaaaacgtattttcaggcaggtggt
tcacctgaacatgtcatccagctcctgtcagagaattactctgctgtggcacagactgtc
aacctgctggctgagtggctcattcagatgggtgtagaaccagcccaggtgcaggaaaga
gtcgaaaatcatctgaagagcctactgattaaacactttgaccctcagaaagctgactct
atcttcactgtggaaggagagacaccagcatggctggagcagatgatcgctcacactaca
tggagagatctcttctacaaactggctgaggctcacccggactgtctgatgctcaacttc
acagtcaagctgatctcagatgcagggtatcagggggagattaccagcgtctctacagca
tgtcagcagctggaggttttctctcgagttttacgtacctcactgtccacgctgctggat
ggaggagagcagaacctggagaagaaccttcctgagtttgccaagatggtgtgtcatggt
gagcacacatacctgtttgctcaggcgatgatgtccatcctggcgcaggaggagcagggc
ggctcgaccgtgcgccgcattggacaggaagtgcagaaatgtgcccttcagagtgggcac
gatgccagccaaatcacgttagcactaggcacagcagcggtgtacccaagggcatgccag
gctcttggtgccatgttgtccaaaggggctctgaacccggccgacatcaccgtcctcttt
aagatgttcagcagtatggatcctcctcctgtagaactgattcgtgttcccgccttcttg
gatctcttcatgcagtctctctttaaacctggtgccaaaatcaaccaagaccacaaacac
aagtatatccacatcctggcatacgcagccagcgtggtggagacatggaagaagaataag
cgtgtcagcatcaataaggatgaattgaagtccacatctaaagccatagacacagtccac
aacctctgctgtaatgaaaacaaaggagctacagaactcatagcagaacttggcaccctg
taccaatgtatcaggtttccagtagttgcaatgggagtgctgaagtgggtggactggaca
gtgtcggagcctcgttacttccagctgcagactgaccacacccctatccacctggccctg
ctggatgagatcagtacgtgtcatcagctcctccatcctcaggtccttcagctgcttgtc
aaactatttgagactgagcactctcagctcgacgtcatggagcagctggaactgaagaag
acgctgctggatcggatggttcacctgttgagccgagggtatgtcctgccggtggtcagt
tatattcggaagtgtctggagaaactgaacacggacatctcactcattagatactttgtg
actgaggttctggacgtgattgctccgccatacacttctgactttgtccagctgttccta
ccaatccttgagaatgacagcattgcaggaaccatccgtactgaaggagaacatgatcct
gtggctgaattcattgcacactgcaagtccaacttcatcatgatgaactga
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