Astyanax mexicanus (Mexican tetra): 103035083
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Entry
103035083 CDS
T05042
Symbol
vclb
Name
(RefSeq) vinculin b
KO
K05700
vinculin
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04510
Focal adhesion
amex04520
Adherens junction
amex04810
Regulation of actin cytoskeleton
amex04820
Cytoskeleton in muscle cells
amex05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103035083 (vclb)
04520 Adherens junction
103035083 (vclb)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103035083 (vclb)
04810 Regulation of actin cytoskeleton
103035083 (vclb)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
103035083 (vclb)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amex04812
]
103035083 (vclb)
04147 Exosome [BR:
amex04147
]
103035083 (vclb)
Cytoskeleton proteins [BR:
amex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
103035083 (vclb)
Exosome [BR:
amex04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103035083 (vclb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vinculin
Talin_IBS2B
Troponin
Talin_R4
Mob_Pre
Motif
Other DBs
NCBI-GeneID:
103035083
NCBI-ProteinID:
XP_022521762
Ensembl:
ENSAMXG00000042904
LinkDB
All DBs
Position
15:complement(17867603..17919531)
Genome browser
AA seq
1065 aa
AA seq
DB search
MPVFHTKTIESILEPVAQQISHLVIMHEEGEVDGKAIPDLCAPVAAVQAAVSNLVRVGKE
TVQTTEDAIMKRDMPPAFIKVENACAKLVQASQMLKADPYSVPARDYLIDGSRGILSGTS
DLLLTFDEAEVRRIIRVCKGILEYLTVAEVVESMEDLITYTKNLGPGMTKMAKMIDERQQ
ELTHQEHRVMLVNSMNTVKELLPVLISGIKIFVTTKTAQSQGVDEALKNRNFTVEKMSAE
INEIIRVLQLTSWDEDAWASKDTETMKRALALIDSKMAQAKNWLRDPNAPPGEAGEQAVR
QILDEAGKVGELCAGKERREILDTAKALGQITDQVADLRARGSGMSPVAIQKAQQVSQGL
DMLSGKVGNAAKKLEAMTNSKQALAKRAEAAQGWLADPAAGPEGEEHVKAVLGEARKIAD
LCEDPRERDDILRSLGEISAMTGKLSQLRKAGKGDTPEARALAKQIATALQNLQSKTNRA
VANSRPAKAAVHLEGKMEQAQRWMDNPTMDDGGVGQAAIRGLVAEGRRLANVLPGSQRSE
LLGKCEQVEQMMAQLAEMAARGESETPQARALAQQLQEALKDLKGKMQEAMTQEVSDIFS
DTTTPIKLLAVAATAPLSTPNREEVFEERAANFENHANRLGATAEKAAAVGTANRSTVEG
IHAAVKSARDLTPQVVSAARIMLKNPGNQAAHEHFETMKNQWIDNVEKMTTLVDEAIDTK
SLLDASEEAIKNDLDKCQMAMANHQPQMLVAGATSIARRANRILLVAKREVENSEDPKFC
EMVKAASDELSSTISPMVMGAKAVAANIQDPALQKGFMDSGYRILGAVAKVREAFQPQEP
DFPPPPPDLEQLHLDDAAPPKPPLPEGEVPPPRPPPPEEKDEEFPEQRAGEMVSEPMMVA
ARQLHDEARKWSSKGNDIIGAAKRMALLMAEMSRLVRGGSGNKRALIQCAKDIAKASDEV
TRLAKEVAKQCTDKRIRTNLLQVCERIPTISTQLKILSTVKATMLGRTNISEEESEQATE
MLVHNAQNLMQSVKETVREAEAASIKIRTDAGFTLHWVRKTPWYQ
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgtttcacacaaagaccatagagagtatcctggagccggtggctcagcagatc
tcgcacttggtgatcatgcacgaggagggggaggtggatgggaaggctataccggacctg
tgcgctcccgtagccgccgtgcaagcagccgtcagcaacctggtcagggtgggtaaggag
actgtacagactacagaagatgccatcatgaagagagacatgcctccagcattcataaag
gtggagaatgcatgcgctaagctggtccaggcctctcagatgctgaaggctgacccatac
tccgttccggccagagattacctcatagacggctcccgtggcatcctctccggaacctct
gacctgctgctgaccttcgacgaggctgaggtgcgtaggatcatccgtgtgtgtaaaggc
attctggagtacctgaccgtggcggaggtagtggagtctatggaggatctgatcacatac
accaaaaaccttggaccagggatgacgaagatggcgaagatgattgacgagcgtcagcag
gagctcacccatcaggagcatcgggtcatgctggttaactccatgaacactgtaaaggag
cttctgcccgtcctcatctcaggaataaagatctttgtgacgacgaagacggctcagagt
cagggagtggacgaggctctgaagaacaggaacttcactgtggagaagatgagcgctgaa
attaatgaaatcatccgagtcctgcagctgacctcctgggatgaggatgcctgggccagc
aaggacactgagaccatgaagagagctctggcactcatcgattcaaaaatggctcaggcc
aagaactggcttagagaccccaacgcaccaccaggtgaggctggtgagcaggcggttcgg
cagattctggacgaggcggggaaggtgggcgagctgtgtgctggtaaagagaggagagag
attctggacacggccaaagctctcggacagatcactgaccaggtggcggacctgcgcgcc
aggggttcaggtatgagtccggtggccattcagaaagctcagcaggtgtctcagggtttg
gacatgctgtcagggaaagtggggaacgcagctaagaaactggaggctatgaccaactcc
aaacaggccctggccaaaagagcagaggctgcccagggatggctggcggatcctgctgca
ggtcctgagggtgaggagcatgtgaaggcggttcttggtgaagcaaggaagattgctgat
ctgtgtgaggacccacgggagagagacgatatccttcgcagtctgggagagatctccgcc
atgaccggcaaacttagccagctcaggaaggcaggtaaaggtgacacccccgaggctcgt
gctttggctaagcagattgctacagctctacagaacctgcagtctaagactaaccgcgcc
gtggctaacagccgcccggctaaagctgccgtccacctggagggaaaaatggagcaagcc
cagcgctggatggacaaccccaccatggacgacggaggagtaggtcaggctgcgatccgg
ggtctggtagctgaggggcgtcggctggcgaacgtgttgccggggtcgcagcggtcggag
ctgttgggaaagtgtgaacaggtggagcagatgatggcacagctggctgaaatggcggct
cgaggagagagtgagacaccgcaggcccgagccctcgcacagcagctacaggaagctctc
aaagatctgaagggtaaaatgcaggaggccatgacacaggaagtctctgacattttcagt
gacaccaccactcccatcaaactgctcgctgtggccgccaccgctcccctcagcactccc
aacagagaggaggtgtttgaggaacgagcagcgaactttgagaatcatgccaaccgtttg
ggggcaacagcagagaaagcagccgctgttggaacagccaatcgcagcacagtagaggga
atccatgcagccgtcaaatctgccagagacctaacaccgcaggttgtatcagctgctcga
atcatgctaaagaatccggggaaccaggcagctcacgagcactttgagaccatgaagaac
cagtggatcgacaatgtggagaagatgaccactctggtggacgaggcgatagacaccaag
tccctgttggacgcatcagaggaggccattaagaatgacctggacaagtgccagatggcc
atggccaatcaccagcctcagatgctggttgccggggcaaccagtattgcccgacgggca
aatcgcatcctgctggtggcaaagcgtgaggtggagaactctgaggaccccaagttctgc
gagatggtgaaggctgcgtccgacgagctcagcagcacgatatcgccaatggtgatggga
gccaaggccgttgccgccaacatacaggacccagctcttcagaaaggttttatggattcc
ggctacaggattcttggtgccgtggctaaagttagagaggccttccagccacaggagccg
gacttcccaccaccccctcctgaccttgaacagctgcatctggatgatgctgctcctcca
aaacccccactaccagagggtgaggtgccacccccaagacctccccctccggaggagaag
gacgaggagttccccgagcagagagctggagagatggtcagcgagcccatgatggtcgcc
gcccggcagcttcacgatgaggctcgcaaatggtccagcaagggtaacgacatcatcggt
gcggcgaagagaatggctctgctgatggcggagatgtctcggctggtgcggggaggcagt
ggtaataaacgtgcgctgatccagtgcgctaaagacatcgctaaagcttcagacgaagtc
acccgtctagccaaggaggtcgcaaagcagtgcacagacaaacgcatcagaaccaacctg
ctgcaggtgtgcgagcgtattcccaccatcagcactcagctgaagatcctctccacagta
aaagccaccatgttggggcgcaccaatatcagcgaggaggaatctgagcaggcaacagaa
atgctggtccacaacgctcagaatctaatgcagtcggtgaaggagaccgtgagggaggct
gaggcggcgtccatcaaaatccgcacagacgccgggttcacgctgcactgggtccggaaa
acaccctggtaccagtga
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integrated database retrieval system
