KEGG   Astyanax mexicanus (Mexican tetra): 103035157
Entry
103035157         CDS       T05042                                 
Symbol
kdm5c
Name
(RefSeq) lysine-specific demethylase 5C isoform X1
  KO
K11446  [histone H3]-trimethyl-L-lysine4 demethylase [EC:1.14.11.67]
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:amex01009]
    103035157 (kdm5c)
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:amex03036]
    103035157 (kdm5c)
Enzymes [BR:amex01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.67  [histone H3]-trimethyl-L-lysine4 demethylase
     103035157 (kdm5c)
Protein phosphatases and associated proteins [BR:amex01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     103035157 (kdm5c)
Chromosome and associated proteins [BR:amex03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    103035157 (kdm5c)
SSDB
Motif
Pfam: PLU-1 JmjC KDM5_C-hel ARID zf-C5HC2 JmjN PHD Aida_N SNAD4
Other DBs
NCBI-GeneID: 103035157
NCBI-ProteinID: XP_007234688
Ensembl: ENSAMXG00000012757
UniProt: A0A3B1J230 A0A8B9JNK1
LinkDB
Position
12:complement(20408184..20442479)
AA seq 1570 aa
MEGGEEFVPPPECPVFEPSWEEFADPLGYIAKIRPIAEKSGICKIRPPPDWQPPFAVEVD
NFRFTPRIQRLNELEAETRVKLNYLDRIAKFWEIQGSSLKIPNIERRILDLFSLAKIVTE
EGGFETVCKERRWARVAQKLGYPPGKNIGSLLRSHYERIVYPFEMFQSGASLPPCKPRPY
DSDDVDKEYKPHSIPLRQSVQPSKMSSYGRRANRLQPEGPEDPTHHPLTTGSQHISSPEP
TEEDIEKNPELKKLQIYGAGPKMMGLGLVARDKARKKDELPQTVIVRDSSAAGAIKEEPA
ETQVTRSDSDIPPPPPNLIVKSEVKKKEEDSADEFDSSAKDEPCTKMTMRLRRNLNNPQF
VDSFVCRMCGRGDEDEKLLLCDGCDDNYHTFCLLPPLTDPPKGNWRCPKCIAEECKKPSE
AFGFEQATREYTLQSFGEMADTFKADYFNMPVHMVPTELVEKEFWRLVSSIEEDVTVEYG
ADIHSKEFGSGFPVNNGKRHLSNEEEDYARSGWNLNVMPVLEQSVLCHINADISGMKVPW
LYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSVAAEKLEEVMKKLTPELFEFQP
DLLHQLVTIMNPNILMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTAD
WLPTGRSCIEHYRRLRRYCVFSHEELTCKMAACPEKLDLNLAAATHREMFIFVQEERKLR
KALLEKGITEAEREAFELLPDDERQCDKCKTTCFLSALACTNCPERLVCLYHTQDLCSCP
IDKLYLRYRYTLDELLAMLHRLKVRAESFDSWANRVKEALEQEEGNKIGIKDLEVLKEEA
AERKFPDNELLQRLRSVLADIQRCKSRSKELLDGTQSSKMSLQDLRTLVETMQNLPCVME
QIGEVQAVLKKLEEFESRGQALVNSSGDEWKKDAASPPAGDIKALLDEGALLPVVAPVCE
MLSGLQEQGRWLEQVRRTLGPEGGEVTLAVLRNLMEAGCNVPQSVGVETAMAELQELLTI
AERWEEKAQICLEHRQKHPLSTLEAIVNEAQLIPVQLPNILSLQACLSRARAWVTDLEEI
QNGEHYPCLDDLEGLVAIGRDLPVRMEELRQLELQVASAHSWREKASKTFLKKSSQHSLL
EVLCPCVEKSKKREDDSISSEADSDVNVLGLTAQDLRDPGAIVMAFKEGERQEKEALLRL
QQLNLAKPGEVKLEQRDSMDTDTPPPSGNPQQNGGSSPSRTSGQSLCVCGGPPRPLLHRC
HLCRDWFHGGCVPFPTVLGPTEAPLASPLCWWDWDTRFLCPRCQRSRRPRLETILALLVA
LQRLPVRLPEGEALQCLTERAITWQGRAKEALETPEVQKALQRLQDLKETRIKEKKEQKH
LEQEEEEKKGNKEDVIVLSDSEEQEDGVIDLTEEADTANKDEKKAANGIQSGCENGIKKT
DTHKITGVESLVPLVSCLKGPAIELTPSTRAQLEELQLEGDLLEVTLDQTHTIYRLLQAA
SSPPHQSLQKLLQIVLQEQKLSGRGSRSKDSRRKRKSQKAEGGPKPTEPSESKKARALNH
TLVQINQEVL
NT seq 4713 nt   +upstreamnt  +downstreamnt
atggagggaggggaagagtttgttccacctccggaatgtccagtgtttgagccgtcatgg
gaggagtttgcagatccacttggttacatcgccaagatccgtccaattgcagagaagtct
gggatatgcaagattcgccctcctccagactggcagccaccttttgctgtggaggtggat
aatttccgcttcactcctcgaatacagagacttaatgaactggaggctgagacgagagta
aagctgaattatctggaccgaattgccaagttctgggagattcaaggttcatctctcaaa
atccccaacatagaacgacgcattctagaccttttcagcttggctaagattgtgactgag
gagggtggctttgagacagtctgcaaagagaggcgatgggctcgagtggctcagaagctt
ggttacccaccaggcaaaaacattggctcactcctgaggtcgcactatgagaggattgtc
tatccttttgagatgttccagtctggtgccagcttaccgccatgtaagcctaggccttat
gatagtgacgatgtggacaaagagtataagccacactccatccccctccgccagtcagtg
cagccctccaagatgagcagttacggacgaagagccaatcgcctgcagcctgagggtcca
gaggatccaacccaccaccctcttaccactggctctcaacacatctcctcgcctgagccc
actgaggaggacatagagaagaatcctgagctcaagaagttacagatctatggagcagga
cccaagatgatgggcctcggtttggtagctcgggacaaggccaggaaaaaagatgagctg
cctcagacagtaatcgttcgagacagcagtgctgctggcgccattaaagaagagccagca
gagactcaagtcacaaggtcagactcggacatacccccgccacctccaaacctcattgtt
aagagtgaggtaaagaaaaaagaggaggacagcgcagatgagttcgacagcagcgctaaa
gatgagccttgcacaaagatgaccatgaggctccgacggaacctcaacaaccctcagttt
gtggattcctttgtgtgtcggatgtgtggccgtggggatgaggacgagaagctgctgcta
tgtgatggttgtgatgataattatcacaccttctgcctcctgcctcctctcacagaccct
ccaaagggcaactggcgctgtcccaaatgtatagcagaggagtgtaaaaaaccttctgag
gcgtttggttttgagcaggccacgagggaatatacgctacagagtttcggggagatggca
gacacgttcaaagctgattactttaacatgcctgtccatatggtgccaacagagctggtt
gagaaggagttctggcggctggttagcagtattgaggaggacgttactgtagagtatgga
gctgacattcactccaaagagtttgggagtggcttccctgtcaacaatggcaagaggcat
ttatcaaatgaagaggaggactacgctcgcagtggctggaacctgaatgtgatgccagtg
ttagagcagtcagtattgtgccacattaatgcagacatctcgggtatgaaggtgccatgg
ctgtatgttggcatggtgttctcagccttctgctggcacatcgaagaccactggagttac
tcaatcaactacttgcactggggtgagcccaagacctggtatggtgttccttcagtcgca
gccgagaagttggaggaagtgatgaagaaactcactcctgaactctttgagttccagcct
gacctgcttcatcaactcgtcaccatcatgaaccctaatattctcatgtctcatggagta
ccggttgtccgtactaatcagtgtgcgggagagtttgtcatcacttttcctcgagcgtat
catagtggcttcaatcagggatataacttcgctgaagccgttaacttctgcaccgcagat
tggttgcccacagggcgttcctgcatcgagcattaccgtcgccttcgccgctactgtgtg
ttctctcatgaagagcttacctgtaagatggctgcttgcccagagaagctggacttgaac
ttggctgctgccacacaccgggagatgttcatcttcgtccaagaggagaggaaactccga
aaggccctgctggagaagggtataacggaggctgaacgggaggcgtttgagttgttgcca
gatgatgaaaggcagtgtgacaagtgcaagaccacctgcttcctctcagccctggcctgc
acaaactgccccgagcgccttgtctgcctctaccacacgcaagacctctgctcctgcccc
atcgacaaactctacctcaggtatcggtacactctggacgagctgctggccatgctgcac
aggctgaaggttcgggctgagtcctttgactcttgggccaacagagtgaaggaagccctt
gaacaagaggagggcaacaaaataggcattaaagatctggaggtgctaaaggaggaagca
gctgaaaggaagtttccagacaatgagcttctccagaggctcagaagtgtactagctgac
atccaaaggtgcaagagcagaagcaaggagcttcttgacggcacccagagcagtaagatg
agcctgcaggacctccgcacactggtggaaactatgcaaaacttaccctgtgtcatggaa
cagattggggaggtgcaggctgtattaaagaagcttgaggaatttgaatcccgcggacag
gcgctagtgaacagcagtggagacgagtggaagaaggatgctgcttctcctccggcaggg
gatatcaaggctctgctggatgagggggccctgctgccagtagtggcccctgtatgcgag
atgctcagtgggctgcaggagcagggtcgctggctggagcaggtgcggcggacgctgggg
ccggagggtggagaggtgacgctggcggtgctgagaaacctgatggaggccggctgcaac
gtgccacagagtgtaggcgtggagactgccatggcagagctgcaggagctgttaaccatt
gctgagcgctgggaagaaaaggcccagatttgcctggagcacaggcagaagcatcctctc
tcaacactggaggccatagtgaatgaggcccagctgatcccggtgcagttgcctaacatc
ctgtctctgcaggcctgcctaagccgggcacgtgcctgggtcaccgatttggaggagatc
cagaacggggagcactacccctgcctggatgatctggaaggtctggtggcgatcggccgt
gaccttcccgtgcggatggaggagcttcgacagctggagctgcaggttgccagcgctcac
tcctggagagaaaaggccagcaagacgttcttgaagaagagcagtcagcacagcctacta
gaggttttgtgtccatgtgtggagaagagcaagaaacgggaggatgactccataagctca
gaagctgactcagatgtcaatgtgctgggtctcactgctcaggacctcagagacccagga
gccattgtaatggcgtttaaagagggtgagcgccaggaaaaagaggccctcctgcgcctg
cagcagctgaacctagccaaacctggggaagttaaattggagcagagggactccatggac
acagacactccccctccctctggtaacccgcagcagaacggtggttcctccccctcccgc
acatcaggccaatcgttgtgcgtgtgcggtggccctccccggcccttgctccaccgctgc
cacctgtgcagagactggtttcatggaggctgcgtgcccttccctactgtactgggtcct
actgaggcacccctagctagcccactctgttggtgggactgggacacacgtttcttgtgc
ccacggtgccagcgctcacgacgcccgcggttagagaccatcctggctctgctggtggct
ctgcagaggttgcctgtgcgcctccctgagggagaggccctccagtgcctcacagagaga
gccatcacttggcagggccgagccaaagaggctttggagactccagaagtgcagaaagct
ctgcagagactgcaggacctcaaagagacacgcattaaggaaaagaaggaacagaagcat
ctggaacaggaggaagaggaaaagaaggggaacaaggaggacgttattgtgctgtcagac
tcagaggaacaagaggatggtgttatagacttgacggaagaggcagacacggcgaataag
gatgagaagaaagctgctaatggaatacagtctggctgtgaaaatggaattaagaagaca
gatactcataaaataacaggggttgagtctctggtaccactggtatcatgtcttaagggg
ccagcgattgaactgaccccctcaaccagagcgcagttagaggagcttcagctagagggc
gacctgctggaagtcacgttagaccagacacacactatctacagactcctgcaagcagca
tcatcgcctcctcaccagtcactacagaagttattacagattgtgctgcaggagcagaag
ctctcaggtcgtggcagcaggtcgaaggactcccggaggaaaaggaagagtcagaaggca
gaaggaggacccaaacccactgagccctcggagtccaagaaagcacgagctcttaaccac
acacttgtacagataaaccaagaggttttgtga

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