KEGG   Astyanax mexicanus (Mexican tetra): 103035240
Entry
103035240         CDS       T05042                                 
Symbol
coro1a
Name
(RefSeq) coronin-1A
  KO
K13882  coronin-1A
Organism
amex  Astyanax mexicanus (Mexican tetra)
Pathway
amex04145  Phagosome
Brite
KEGG Orthology (KO) [BR:amex00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    103035240 (coro1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:amex04131]
    103035240 (coro1a)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:amex04812]
    103035240 (coro1a)
   04147 Exosome [BR:amex04147]
    103035240 (coro1a)
Membrane trafficking [BR:amex04131]
 Endocytosis
  Phagocytosis
   Coronins
    103035240 (coro1a)
Cytoskeleton proteins [BR:amex04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Cross-linking proteins
     103035240 (coro1a)
Exosome [BR:amex04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103035240 (coro1a)
SSDB
Motif
Pfam: DUF1899 WD40_4 WD40 WD40_Prp19 WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 WD40_WDHD1_1st WDR55 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EIPR1 EIF3I ANAPC4_WD40 Beta-prop_EML WDCP Trimer_CC Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_WDR75_1st WD40_RFWD3 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_HPS5 NBCH_WD40 Beta-prop_NUP159_NUP214 CorA BLOC1_2 bZIP_1 DUF5798 ZapB DUF1664 DivIC Seryl_tRNA_N
Other DBs
NCBI-GeneID: 103035240
NCBI-ProteinID: XP_007251086
Ensembl: ENSAMXG00000008438
UniProt: A0A8B9KCN1
LinkDB
Position
19:complement(19118333..19148172)
AA seq 456 aa
MSRKVVRSSKFRHVFGQAVKADQCYDDIRISQMTWDSNFCSVNPKFVAMIVDASGGGAFI
VLPLSKTGRIDMSQPTVCGHTGPVLDIEFCPHNDNIIASGSEDCSVMIWEIPEGGLTQPL
KEPVVKLDGHSKRVGILSWHPTAHNVLMSAGCDNVVILWNVARGEAVVKVDSVHTDLIYS
ACWNTDGSRILTSCKDKKLRVLDPRKGTVIAEKDKPHEGSRPVRAVFVSEGKILTTGFSR
MSERQVALWDPDSFNEPLTLQELDTSSGVLLPFFDPDTSVVYLCGKGDSSIRYFEVTDEA
PYVHYLSMYSSKESQKGMGYMPKRGLEVNKCEIARFYKLHERKCEPIVMTVPRKSDLFQE
DLYPDTIGPEPSVEADEWFAGKEGKPILISLKDGFVATTKNKEFKVIKSLMSTTTASCGQ
RQGNGEDVQALQNEVKELREIVEELSKRVSELESKN
NT seq 1371 nt   +upstreamnt  +downstreamnt
atgtccaggaaggtggtccggtccagtaagttccgtcatgtcttcggtcaggcggttaag
gctgaccagtgctacgatgacatcaggatctctcagatgacctgggacagcaacttctgc
tccgttaaccccaaattcgtcgccatgatcgtggacgccagcggaggaggagccttcatc
gtcctgccgctcagcaagactggccgtatcgacatgtcccagcccaccgtctgcggccac
actggacccgtcctggacatcgagttctgcccacacaacgacaacatcatcgccagcggc
tctgaagactgcagtgtcatgatctgggagattccagaaggtggtctgacgcagcctctg
aaagagccagtagtgaagctggatggtcactccaaacgtgtgggcattctcagctggcac
cccacagcacacaatgtccttatgagtgcaggctgtgataatgtggtgatcctgtggaac
gtggcgagaggtgaggcagtggtcaaggtggactctgtgcacaccgatctcatctacagc
gcctgctggaacacagacggctcacgcatcctcacctcctgcaaggacaagaaactgcgc
gtcctggatccccgcaagggcaccgtcatcgccgagaaggataagcctcatgagggctcc
aggccggtcagggctgtgtttgtgtccgaggggaagattctgaccactggtttcagcaga
atgagtgagagacaggtggcgctctgggatccggacagctttaatgagccgctgactctg
caggagttggacaccagtagtggagttctgctgcccttctttgacccagacacttcggtc
gtttacctgtgcggaaagggcgacagcagtattcgttactttgaggtgacggacgaggct
ccttacgtccattatctctccatgtacagcagcaaagagagccagaaggggatgggctac
atgcccaagagaggactggaggtcaacaagtgtgagatcgccagattctataaactccat
gagaggaagtgtgagcccattgtaatgacagtgccacgaaagtctgacctgttccaggag
gatctgtatccagacactattggaccggagccgtcggtggaggctgatgaatggttcgct
ggtaaagaggggaagcccatcctcatctctctgaaggacggctttgtggccaccaccaaa
aacaaagagtttaaggtcatcaagagcctcatgtccaccacaacggcctcctgcggccag
cggcagggcaatggcgaggatgtgcaggcgctgcagaatgaagtgaaggagttgagggag
atcgtggaggagctgagtaaacgagtgagcgagctagaaagcaaaaactga

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