Astyanax mexicanus (Mexican tetra): 103035240
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Entry
103035240 CDS
T05042
Symbol
coro1a
Name
(RefSeq) coronin-1A
KO
K13882
coronin-1A
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103035240 (coro1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103035240 (coro1a)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
amex04812
]
103035240 (coro1a)
04147 Exosome [BR:
amex04147
]
103035240 (coro1a)
Membrane trafficking [BR:
amex04131
]
Endocytosis
Phagocytosis
Coronins
103035240 (coro1a)
Cytoskeleton proteins [BR:
amex04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
103035240 (coro1a)
Exosome [BR:
amex04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103035240 (coro1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1899
WD40_4
WD40
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
EIF3I
ANAPC4_WD40
Beta-prop_EML
WDCP
Trimer_CC
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
WD40_RFWD3
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
NBCH_WD40
Beta-prop_NUP159_NUP214
CorA
BLOC1_2
bZIP_1
DUF5798
ZapB
DUF1664
DivIC
Seryl_tRNA_N
Motif
Other DBs
NCBI-GeneID:
103035240
NCBI-ProteinID:
XP_007251086
Ensembl:
ENSAMXG00000008438
UniProt:
A0A8B9KCN1
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Position
19:complement(19118333..19148172)
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AA seq
456 aa
AA seq
DB search
MSRKVVRSSKFRHVFGQAVKADQCYDDIRISQMTWDSNFCSVNPKFVAMIVDASGGGAFI
VLPLSKTGRIDMSQPTVCGHTGPVLDIEFCPHNDNIIASGSEDCSVMIWEIPEGGLTQPL
KEPVVKLDGHSKRVGILSWHPTAHNVLMSAGCDNVVILWNVARGEAVVKVDSVHTDLIYS
ACWNTDGSRILTSCKDKKLRVLDPRKGTVIAEKDKPHEGSRPVRAVFVSEGKILTTGFSR
MSERQVALWDPDSFNEPLTLQELDTSSGVLLPFFDPDTSVVYLCGKGDSSIRYFEVTDEA
PYVHYLSMYSSKESQKGMGYMPKRGLEVNKCEIARFYKLHERKCEPIVMTVPRKSDLFQE
DLYPDTIGPEPSVEADEWFAGKEGKPILISLKDGFVATTKNKEFKVIKSLMSTTTASCGQ
RQGNGEDVQALQNEVKELREIVEELSKRVSELESKN
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggaaggtggtccggtccagtaagttccgtcatgtcttcggtcaggcggttaag
gctgaccagtgctacgatgacatcaggatctctcagatgacctgggacagcaacttctgc
tccgttaaccccaaattcgtcgccatgatcgtggacgccagcggaggaggagccttcatc
gtcctgccgctcagcaagactggccgtatcgacatgtcccagcccaccgtctgcggccac
actggacccgtcctggacatcgagttctgcccacacaacgacaacatcatcgccagcggc
tctgaagactgcagtgtcatgatctgggagattccagaaggtggtctgacgcagcctctg
aaagagccagtagtgaagctggatggtcactccaaacgtgtgggcattctcagctggcac
cccacagcacacaatgtccttatgagtgcaggctgtgataatgtggtgatcctgtggaac
gtggcgagaggtgaggcagtggtcaaggtggactctgtgcacaccgatctcatctacagc
gcctgctggaacacagacggctcacgcatcctcacctcctgcaaggacaagaaactgcgc
gtcctggatccccgcaagggcaccgtcatcgccgagaaggataagcctcatgagggctcc
aggccggtcagggctgtgtttgtgtccgaggggaagattctgaccactggtttcagcaga
atgagtgagagacaggtggcgctctgggatccggacagctttaatgagccgctgactctg
caggagttggacaccagtagtggagttctgctgcccttctttgacccagacacttcggtc
gtttacctgtgcggaaagggcgacagcagtattcgttactttgaggtgacggacgaggct
ccttacgtccattatctctccatgtacagcagcaaagagagccagaaggggatgggctac
atgcccaagagaggactggaggtcaacaagtgtgagatcgccagattctataaactccat
gagaggaagtgtgagcccattgtaatgacagtgccacgaaagtctgacctgttccaggag
gatctgtatccagacactattggaccggagccgtcggtggaggctgatgaatggttcgct
ggtaaagaggggaagcccatcctcatctctctgaaggacggctttgtggccaccaccaaa
aacaaagagtttaaggtcatcaagagcctcatgtccaccacaacggcctcctgcggccag
cggcagggcaatggcgaggatgtgcaggcgctgcagaatgaagtgaaggagttgagggag
atcgtggaggagctgagtaaacgagtgagcgagctagaaagcaaaaactga
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integrated database retrieval system