Astyanax mexicanus (Mexican tetra): 103035265
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Entry
103035265 CDS
T05042
Symbol
optn
Name
(RefSeq) optineurin
KO
K19946
optineurin
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04137
Mitophagy - animal
amex04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
103035265 (optn)
04137 Mitophagy - animal
103035265 (optn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
amex04131
]
103035265 (optn)
Membrane trafficking [BR:
amex04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
103035265 (optn)
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
103035265 (optn)
Autophagy
Mitophagy
PINK1-Parkin associated proteins
103035265 (optn)
Xenophagy
Cargo receptors
103035265 (optn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CC2-LZ
NEMO
zf_C2H2_10
EDR4-like_1st
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
103035265
NCBI-ProteinID:
XP_022527531
Ensembl:
ENSAMXG00000016337
LinkDB
All DBs
Position
2:complement(5491805..5506359)
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AA seq
551 aa
AA seq
DB search
MASGSPMVNGDLSSPRGSHSAATSHVEETLQQMNILIKENRELKEALKQTNLSMKERFEG
LTVWKEKQKEERSFLESRLEEARQRVHALDSENELLKKRVQELESHTGAGEGEGDMQAQL
ELLKGQIVRLQAEKCDLVAMNSELQLKMGQGSPEDSFIEIRIAEGEMNVTKDLPVAEKDP
FSSSTAKSDMAASRLDSEEQTVSQLLQSLRQETQQKEQLQIQLQAAMKRIAELELKLPIT
ESETQTSLPCSTAAAADAQSKNLQEDKDKSASEVENMKTQMMNLFKELQQAQSKLDEAEN
MKRNLQDRCKDQEQDLGTLRTQLGERQQMQAENDRLKVQLESMQSANKLEQRKAQDERNN
LAQLKDAYTKLFEDYNELKEDNKKKEGCVSRDEYADLQARLAAAEQALADKQERIDVMKQ
EIFQKEKELETISVFQAQAEVYSSDFYAERAAREKIHEEKERLAAQLEFVKKQNTQLQEE
MDSLGRQSMSEMQRRHVSRGASPGGSSPHQLQSGRVDWQQQVNIPEHACPKCQEVLPDLD
SLQIHIMDCII
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggcatcgggttcgcccatggtgaatggggacctcagttcaccccgagggtcccacagt
gcagccacgtcccatgtggaggagactcttcaacaaatgaacatcctcatcaaggagaac
agggagctgaaagaggcgcttaaacagactaacctgtcaatgaaggagaggtttgagggt
ctgactgtgtggaaggaaaagcagaaagaggagagaagcttcctggagagtcgccttgag
gaggccaggcaaagagtgcatgctctagactctgaaaatgagctactgaagaaacgagtg
caggagctggagagccatactggtgcaggggagggagaaggtgatatgcaggcccagctg
gagctgctgaagggtcagattgtgcgtctgcaggcggagaagtgtgatttggtggctatg
aactctgaactccagctgaaaatgggtcaaggatcaccagaagactccttcattgagatt
cgcattgcggagggtgagatgaatgtaaccaaagacttgcctgttgcagagaaagatccc
ttttcttccagcacggctaagagtgatatggctgcatctcggctggattcggaggagcag
acagtgagccagctcctgcagtctctgagacaggagacccagcagaaggagcaactgcag
atccagcttcaggctgctatgaagaggattgcagaattggagctaaagctgcccatcact
gagagcgagacacagacatccctgccctgcagcactgcagcagctgcagacgctcagagc
aagaaccttcaggaggacaaggacaagtctgcctctgaggtggagaatatgaagactcag
atgatgaacttgtttaaggagctgcagcaggctcagagtaaactggatgaggcagagaac
atgaagaggaaccttcaggacaggtgtaaggatcaggagcaggacctgggcacactgaga
actcagctgggcgagagacagcagatgcaagctgagaatgacaggctgaaggtacagctg
gagagcatgcagtccgccaacaaactggaacaaaggaaagctcaggatgagaggaataat
ctggcacagctgaaagacgcttacaccaaactgtttgaggattataacgaactcaaggaa
gataataagaaaaaggagggctgtgtatcccgggatgagtatgctgatcttcaggccagg
ctggctgcagcagagcaggctcttgcagataaacaggagaggattgatgtgatgaagcag
gagatcttccagaaggagaaagagctggagacgatatctgtgttccaggctcaggcggaa
gtgtattcctcagacttctatgcagagcgtgcagcgcgggagaagatccatgaggagaag
gagcgtctggctgcacagctggagtttgtgaagaaacagaacacccagctacaggaagag
atggactcactgggcaggcagtccatgagtgagatgcagaggagacatgtgtctcgtgga
gcgagtccaggaggttcctcacctcaccagctgcagagtggcagagttgattggcagcag
caggtgaacatcccggagcatgcctgtccaaagtgtcaggaagtcctgccggatctggac
tctctgcagatccacatcatggactgcatcatctaa
DBGET
integrated database retrieval system