Astyanax mexicanus (Mexican tetra): 103035490
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Entry
103035490 CDS
T05042
Symbol
abcb5
Name
(RefSeq) ATP-dependent translocase ABCB1 isoform X1
KO
K05660
ATP-binding cassette, subfamily B (MDR/TAP), member 5
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
103035490 (abcb5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amex02000
]
103035490 (abcb5)
Transporters [BR:
amex02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
103035490 (abcb5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_22
AAA_16
Rad17
AAA_30
RsgA_GTPase
AAA_28
AAA_7
AAA_21
AAA_29
SbcC_Walker_B
DUF2207_C
Viral_helicase1
AAA_25
Zeta_toxin
Motif
Other DBs
NCBI-GeneID:
103035490
NCBI-ProteinID:
XP_022529700
Ensembl:
ENSAMXG00000020045
ENSAMXG00000040485
LinkDB
All DBs
Position
6:9819541..9970847
Genome browser
AA seq
1352 aa
AA seq
DB search
MWNTYLDTPCETTSRTETKEKPANNRIPPDPQKVIPVGHLNLAFIQEENLQDKKPGQLRD
NELDDSVSNNEKQTEVKSDEEKKPVKTVGIFQLFRYATWPEVFLMLVGLLCSAIHGAALP
IMFIVFGSMTDSFILSGQQLNFTGNYTFNLTKRSSDCMTFPGEDIEGSMTKNAYYFVGIG
AGVLLLGTFQVMLFVITSTRQTKRIREKYFHAVLHQPMAWFDTHPIRELNTRLTDDINTI
NDGLGDKICIFVQYFCRFLAGFIIGFIYGWKLTLVIMSVSPLLAGSAALCSKILATLTGR
ELSAYAKAGSVSAEILGAIRTVVAFNGRQKALEKYETNLLEAKNFGVRKAITTNAAMGIT
QFLLFSTFALAFWYGTKLSVDEPENYSIGKVLTVFFSVMIGALSLGQGAPNLESIAKARG
AAYSIYSTIDMPRPIDSSSIKGYKPDSVSGDIEFKKIHFSYPSRKDVKILQGMSLKVPHG
KTIALVGASGCGKSTTIQLLQRFYDPDAGEVTLDGRDIRSLNVRWLRENMGIVSQEPVLF
GTTIAENIRYGREDATDQDIDRVVREANAYEFISKLPDGLNTMVGERGAQLSGGQKQRIA
IARALVKNPKILLLDEATSALDTQSEAIVQAALDKARAGRTTIVIAHRLSTIRTADVIAG
FKDGEVVEQGTHRELMNKKGVYYSLVMQQTAGRSADDEAADENVSEGESLDDLSDAEHSD
DLMDVTTANGGFARSSWRSISLRSKRSRSSSKSKSKRTNKAEKEEESVPDVPFSRILALN
KSEWPYLLVGTLASFVGGGVYPAVAILFAKIIGVFSEPDPEVKRQKALMFSLLFLLVGAV
AFLTFFFQGYMFGKSGEILTMRLRSQAFKAILRQDISWFDDHKNAVGVLTTKLATDASLV
KGAAGSRLGLATNTICALVIAMIVAFFHSWQLTLMILACTPILTGANFIQMRAMAGHTSK
DQSALEMSGRISTETVENFKTVVSLTKEDVFFRKFNDSLNKPYRSALCKAPIYGITFALA
QAIPYFVNAAVFRFGSWLIAHCHTQFENVFLVFSVIVFAAMSIGQSSSFAPDFAKAKAAA
GRILALLEKTPEIDIYSEAGDKPINFKGDIEFRDVHFFYPTRPNIKILQGLNVSVTQGQT
LALVGGSGCGKSTSIQLLERFYNPAGGQVFADGMDTRGLNLAWLRSQLGLVSQEPILFDC
TITENIQYGDNSRVVSQEEVVEAAISANIHNFISDLPEKYNTRVGDKGTQLSGGQKQRIA
IARALVRKPKVLLLDEATSALDTESEKIVQKALDEARKGRTCIVIAHRLTTVQNADIIAV
IQNGQVVEQGMHSELMAKHGAYYALVNAQVSH
NT seq
4059 nt
NT seq
+upstream
nt +downstream
nt
atgtggaatacttatctggatactccttgtgaaacaacatcaagaaccgaaacgaaggaa
aagccagcgaacaacagaatcccccctgacccccagaaggtgattcctgtgggccacctc
aatcttgctttcatccaggaggagaatcttcaggacaagaaacccggacagctgagagat
aatgaattggatgactcagtatcaaacaatgagaaacagacagaagtgaagtctgatgag
gagaagaagccggtgaagacagtcgggatttttcagctgtttcgttacgccacctggcca
gaggtgttcctgatgttggtcggcctcctgtgttctgctattcacggagccgccctgccc
atcatgtttatcgtatttgggtcgatgactgacagcttcattctgagtgggcagcagtta
aattttacaggaaactacaccttcaacttgacgaagaggtcctcagactgtatgactttt
cctggagaagatattgaagggtcaatgacaaagaatgcttactactttgttgggatagga
gctggagtgttgctcctcggaacattccaggtcatgctgttcgtaataacctccaccagg
cagaccaaacggatccgggagaagtacttccatgccgtcctgcaccaaccaatggcatgg
tttgatacacatcccatcagagaactcaacactcgactcacagatgacataaacacaatc
aacgatggtctgggagacaagatctgcatatttgtccagtacttctgcaggtttcttgct
ggtttcatcatcgggtttatctatggctggaagctaacgctggtcattatgtcagtcagt
ccactgctggcaggttcagcagctctgtgttctaaaattcttgccactcttaccggcaga
gagctgtcagcctatgctaaagctggatcggtgtctgcggagattcttggggccatcagg
actgttgtggcctttaatggacggcaaaaagctcttgaaaaatatgaaactaatttactg
gaagcaaagaacttcggagtgaggaaagctatcacaacaaatgcagctatgggcataaca
cagttcctcttattttcaacttttgccctggcattttggtatgggacaaaactgtctgtg
gatgaaccagaaaattacagcattggaaaggtccttactgtcttcttctcagtgatgatc
ggggccctctctttgggtcaaggagctcccaacctggagagtattgctaaggcccgcggt
gctgcatattccatttacagcaccatcgacatgccccgtcccattgacagcagttcaata
aagggctacaaaccagacagtgtgagtggagacattgaattcaagaagatacattttagc
tacccttccagaaaagatgtgaagattcttcaggggatgagtctgaaagtgccccatggg
aagacgattgcactggttggggctagcggttgtgggaagagcactaccattcagctgtta
cagaggttttatgatccagatgcaggagaggtgaccctggatggtcgagatatccggtct
ctgaatgtacgatggctgagggagaacatgggcattgtgagccaagagcctgttctcttt
ggcacgaccattgctgagaacatccgctacggccgtgaggacgctactgaccaggatatt
gaccgggtcgtgagagaggccaacgcctacgagttcatctccaaactaccagatggactg
aacaccatggtgggagaaaggggggctcagctgagtggtgggcagaagcagaggatcgct
atcgctcgtgctctggtcaagaaccccaaaattctcctgctggatgaagccacttcagcc
ttggacacacagagtgaggccatcgtgcaggctgctttagataaggcacgagcaggtcgc
accactatagtgattgcccaccggctttccaccattcgcactgctgatgtgattgctggc
tttaaggacggtgaagtggtggaacagggaactcatagagaactcatgaacaagaaagga
gtctactactctctcgtcatgcaacagactgctgggagatcagctgatgatgaagctgca
gatgaaaatgtttcagaaggagagtcccttgatgatttgtctgatgcagaacactctgat
gatctgatggatgtgacaacagcaaacggtggctttgccagaagctcttggcgcagcatt
tctcttcggagtaaacgatcaagaagctcatcgaagtctaaatcaaaaaggaccaacaaa
gctgagaaggaagaggaatctgttccagacgtacctttcagcaggatcctggctctgaac
aagtctgaatggccctacctgctggtgggcactctggccagctttgtgggaggaggtgtt
taccccgctgtggccatcctctttgccaaaatcattggtgtgttttctgaacctgaccct
gaagtgaagcgacagaaggcattgatgttctctcttctcttcctcctcgttggagctgta
gcctttctcacatttttctttcagggctacatgttcgggaagtcaggggagattttgacc
atgaggctgaggagtcaggcctttaaggccatcctgagacaggacatcagctggtttgat
gaccacaaaaatgcagtaggagtcctgaccactaaactagcaacagatgcgtcactagtg
aaaggggcagcaggatcgagactgggtttggctaccaacactatctgcgcactggtcatc
gcaatgattgtagccttcttccatagctggcagctcacgcttatgattcttgcctgtacg
cccatcctcaccggggcaaatttcatccagatgagagccatggcaggtcacacctccaaa
gaccagagtgcactggagatgtcaggcaggatatcgaccgaaacagtggagaacttcaag
actgtggtttctttaacaaaagaagacgtcttcttccgcaagttcaacgacagcctcaat
aaaccataccgctctgccttgtgtaaagctcctatctatgggatcaccttcgctcttgct
caagcaatcccctacttcgtcaatgcagcagtcttccgcttcggttcttggctgattgca
cactgccacactcaatttgagaacgttttcctggtgttttctgtgatcgtctttgctgcc
atgagtattggccaatcctcttccttcgccccagactttgccaaagccaaagcagctgcc
ggcaggatcttagccctgctcgagaagacacctgagattgacatctatagtgaagcagga
gataaaccaataaattttaagggagatattgagttccgcgacgtgcacttcttttaccca
acacggccgaacattaagattctgcagggtcttaatgtatcagtgacacaaggacagact
ctggccctggttggaggcagtggttgtgggaagagcacatctatccagctgctggaacgc
ttctacaaccctgctggagggcaagtgtttgctgatggaatggacactcgggggctgaac
ctcgcctggctgcgctctcagctgggcctggtctctcaggagcccatcctgtttgattgc
accattactgagaatattcagtatggagacaacagccgggtggtcagccaggaagaggtg
gtggaagctgcaataagcgccaacatccataactttatttcagacctgccagagaaatac
aacacacgtgtgggggataaaggaactcagttgtctggaggacagaaacagaggatagcc
attgcgcgagctctggtccgaaaacccaaagtgctgctgctggatgaagcaacgtcagcc
ctggacacagagagcgagaagattgttcagaaagctctggacgaagctcgaaagggacga
acctgcatcgtcatcgcccacagactgaccaccgtccagaacgcagacatcattgcagtc
attcagaatggccaggtggtggagcagggcatgcacagcgagctaatggctaaacatggg
gcgtactacgctctcgtcaatgcacaagtgtcccactaa
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integrated database retrieval system
