Astyanax mexicanus (Mexican tetra): 103035502
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Entry
103035502 CDS
T05042
Symbol
lrrn1
Name
(RefSeq) leucine-rich repeat neuronal protein 1
KO
K24492
leucine-rich repeat neuronal protein 1/2/3
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103035502 (lrrn1)
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
103035502 (lrrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_9
ig
LRR_1
LRR_EndoS
Ig_2
LRR_Zer-1
V-set
fn3
Pur_ac_phosph_N
LRRNT
LRRCT
Sp38
CbiK
Ig_C17orf99
Ig_5
LSR
Motif
Other DBs
NCBI-GeneID:
103035502
NCBI-ProteinID:
XP_007239340
UniProt:
A0A8B9HJ44
LinkDB
All DBs
Position
5:3186075..3214360
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AA seq
720 aa
AA seq
DB search
MSRGTAVCAEQSQPCLFLLLAALLVLTLSSAEATDCPHLCVCEIRPWFTPQSTYREATTV
DCNDLRLTRIPGNLSSDTQVLLLQSNYIAKTSEELEQLLNLTELDLSQNNFSNIHDIGLT
NMSQLTTLHLEENQIVEMPDFSLQDLTNLQELYINHNQISFIAPNAFAGLRNLLRLHLNS
NRLKAIDSRWFDSTPNLEILMIGENPVVGILDLNFKPLVNLRSLVLAGMELTDIPGNAFV
GLDNLESLSFYDNKLVRVPQNALEKLPNLKFLDLNKNPVHKIQGGDFKNMLRLKELGINN
MGELVSIDRFALDNLPELTKLEATNNPKLSYISRLSFRDVPSLESLMLNNNALNSLYLAT
VESLPNLREISIHSNPLRCDCVIQWMSSNKTTIRFMEPLSMYCAMPPEVRGQRMRDVLSH
ESAEQCLPMISHDTFPNHLNLDIGMTVDLDCRAMAEPEPEIYWVTPLGNKVMMDTVSDKY
RLSSAGTLHISNIQVDDSGHYTCVAQNTEGADTRVTAIRVNGTLLDSTQLMKIYVKHTES
HSILVSWKVNSNVMTSNLKWSSATMKIDNPHITYTARVPVDVHEYNLTHLQPATEYEVCL
SVSNIHQQTQKSCVNVTTKHATFAVEIYEQGTNTALAAVMGTILAIISLGSITVYIAKRW
KRKNYHHSLKKYMQKTSSIPLNELYPPLINLWEVDSEKDKDGSSEPKPSQVDTTRSYYMW
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtctagagggactgcagtctgcgctgagcagagccagccttgcttgtttcttctgctg
gcagctcttctcgtcctcacgctgtcctccgctgaagctacagattgccctcacctttgc
gtttgtgaaatccggccttggttcacgccccagtccacctacagggaagctacgactgtg
gactgcaatgaccttcgcctcacacgaatccctggcaacctctcgagcgacactcaggtc
ttgcttctgcagagcaactacatcgccaaaaccagcgaggaactggagcagctcctcaac
ctgacagagctggatctttcccagaacaacttcagcaacatccatgacatcggcctgacc
aacatgtcgcagctcaccacgctccacctggaggagaatcagatcgtggagatgcctgac
ttcagcctgcaggacctcaccaatcttcaggagctctacatcaaccacaatcagatcagc
ttcattgcgcccaacgcgttcgccggcttgcgcaacctgctcaggctccacctgaactcc
aacaggctcaaggccatcgacagccgatggttcgattcgacgcccaaccttgagattttg
atgattggggaaaatcctgtggttggaattctggatttgaactttaagcctcttgtgaac
ctgagaagtttggttctggcagggatggaactcaccgacatacctgggaatgcttttgtt
ggactggacaatctcgagagcctgtccttctacgataataaactggtgagggtgcctcaa
aacgccctggagaaactgccaaacctgaaattcctggatttaaacaagaacccagtgcac
aaaatccagggaggagactttaaaaacatgctaaggctgaaggaactcggcatcaacaat
atgggggagctcgtctccattgatcgctttgcgctggacaatctcccagagttgaccaaa
ctggaggccaccaacaaccccaagctttcctacattagcagattatcgttccgtgatgtt
ccatctctggagagcctcatgcttaacaacaatgctctgaactcgctctacctggccacg
gttgagtccttgcctaacctgcgggagatcagcatccacagcaacccactgcgctgcgac
tgcgtcatccagtggatgagctccaataaaaccaccattcgcttcatggagcctctttcc
atgtactgcgcaatgccgcctgaggtcagaggtcaacgcatgagagatgttctctcccac
gaatctgctgagcagtgtctgcccatgatctcccacgacaccttccccaaccacctcaac
ctggacataggtatgacggtagacctggactgccgtgcaatggctgaacccgaaccggag
atatactgggtgactcctctgggtaacaaagtcatgatggacactgtatctgataagtac
cgtctgagcagtgcaggaaccctccacatatccaacattcaggtggacgactccggtcac
tacacctgcgtcgctcagaataccgaaggagccgacaccagggtgaccgccattcgcgtc
aacggtactctcctggacagcactcagcttatgaagatctacgtgaagcacaccgaatcc
cactcgatactggtgtcctggaaggtcaactccaacgtcatgacctccaacctgaagtgg
tcttccgccaccatgaagatcgacaacccccacatcacctacacggccagagtccccgta
gacgtccacgaatacaacctcactcacctccagcctgctaccgagtacgaggtttgcctc
tcggtctccaacatccaccagcagactcaaaagtcttgcgtcaacgtcacgaccaagcac
gccaccttcgccgtggagatctacgaacaaggcaccaacacggccctcgccgcggtcatg
ggaaccatcctggccatcatcagtctcggttccatcaccgtctacatcgccaagagatgg
aagaggaagaactaccaccattcgctcaagaagtacatgcagaaaacctcctccattcct
ctcaacgaactctacccgcccctcatcaacctgtgggaggtggacagcgagaaggacaaa
gacggttcctcggaacccaaacccagccaggtggacaccacgagaagttactacatgtgg
tga
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