Astyanax mexicanus (Mexican tetra): 103035528
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Entry
103035528 CDS
T05042
Symbol
matn1
Name
(RefSeq) cartilage matrix protein isoform X1
KO
K19467
matrilin
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103035528 (matn1)
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
Von Willebrand domain-containing proteins
VWA domain-containing proteins
103035528 (matn1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Matrilin_ccoil
VWA_3
FXa_inhibition
cEGF
EGF_CA
Sec23_trunk
EGF_LRP2
EGF_3
Copine
Motif
Other DBs
NCBI-GeneID:
103035528
NCBI-ProteinID:
XP_022539009
Ensembl:
ENSAMXG00000020612
UniProt:
W5LN17
LinkDB
All DBs
Position
3:50434595..50443920
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AA seq
487 aa
AA seq
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MALLGFVMLLCILGAQATVDFRHAAAMAAGLCNTKPTDLVFIIDSSRSVRPSEFEQVKVF
LNKVIEGLDVGPDATRVGVVNYASRVKNEVSLKSHKTKAGLIKAVSKIEPLSSGTMTGLA
IQFSMNVAFSEAEGARKSPDISKVAIIVTDGRPQDNVRDIAAKAREAGIEIFAIGVGRVD
MNTLKQLASDPLEEHTDYVESYSLIEKLTKKFQEAFCVSDLCATGDHDCEQICISVPGSF
KCACREGHTLKADGRTCSACSDTATDVVFLIDGSKSVRPENFELVKKFINQIVDKLDVSD
RGTHVGLVQYSSSVKQEFPLGRHNSKKDVKDAVKKMAYMERGTMTGQALRFLLDNSFTPG
QGARPGVAKVGIVFTDGRSQDYIGDAARKAKENGFNMYAVGVGNAVEDELKEIASEPIGD
HYFYTADFKTMNQIAKKLQINTCPVEDPCECDSITKFQKKVEEALQALTKKLDGVTKRIA
ALENKIV
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atggcgctgctggggtttgtgatgctgctctgcatcctgggagctcaagccactgtggac
ttcagacatgctgctgctatggctgcaggactgtgcaacaccaagcccaccgacctggtg
ttcatcatcgacagctctcggagtgtgaggccctctgagtttgagcaggtcaaagtcttc
ctcaataaggtcatcgagggtctggatgtggggcccgacgctacacgtgtgggtgtggtg
aactacgccagccgggtgaagaatgaggtgtccctgaagtcccacaagacaaaggctggc
ctgatcaaggccgtgtccaagattgagccgctctcctccgggaccatgactggcctggct
attcagttttccatgaatgtggccttcagcgaggcagagggggcacgcaaatccccagat
atcagcaaggtcgccatcattgtgactgacggaagaccacaggacaatgtgcgtgacatt
gcagcaaaagcccgagaggcaggcattgagatatttgccattggcgtgggccgagtggac
atgaacacactgaagcagttggccagtgaccccctggaggagcacacagactacgtggag
agctacagcctcatcgagaagctcaccaagaagttccaggaggccttctgtgtgtccgac
ctgtgcgcgacaggtgatcacgactgtgagcaaatttgcatcagcgtgcctggatcgttc
aagtgtgcctgcagggagggccacacactcaaggcagatggtcgtacctgcagtgcctgc
agtgatactgccacagacgtggtcttcctgattgatgggtcaaagagtgtgaggccagag
aactttgagctggtgaagaagtttattaaccagatcgtagacaagctggatgtgtcagac
aggggaacacacgtgggcctggtgcagtactccagctctgtgaagcaggagtttcctctt
gggcgccataacagcaagaaggacgtgaaagacgcagtgaagaagatggcctacatggag
cgcgggaccatgactggccaggctctccgcttcctgctggacaacagcttcacacccggt
cagggtgccaggccgggagtggccaaggtgggcatcgtcttcacagacggcagatctcag
gactacattggagatgcagcaagaaaagccaaggagaacggctttaacatgtatgctgtg
ggagtgggaaacgctgtcgaggatgaactgaaagagatcgcctctgaacctattggagac
cattacttctacactgctgacttcaaaaccatgaaccaaatcgccaagaagctgcaaatc
aacacttgtccagtggaggacccctgtgaatgtgattcaattaccaagttccagaagaaa
gtggaggaggcactacaagcattaacaaagaaattggatggagtaacaaagaggatcgct
gctctggagaacaagattgtctga
DBGET
integrated database retrieval system
