Astyanax mexicanus (Mexican tetra): 103035566
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Entry
103035566 CDS
T05042
Symbol
ncor1
Name
(RefSeq) nuclear receptor corepressor 1 isoform X1
KO
K04650
nuclear receptor co-repressor 1
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
103035566 (ncor1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
amex01009
]
103035566 (ncor1)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
amex03036
]
103035566 (ncor1)
Protein phosphatases and associated proteins [BR:
amex01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103035566 (ncor1)
Chromosome and associated proteins [BR:
amex03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
SMART complex
103035566 (ncor1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GPS2_interact
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
103035566
NCBI-ProteinID:
XP_022521458
Ensembl:
ENSAMXG00000019642
LinkDB
All DBs
Position
1:complement(11308341..11447767)
Genome browser
AA seq
2497 aa
AA seq
DB search
MSSSGFPPSQGSFSSEQSRYPPHSVQYTFSPVRHPPELTVPEYRNSHLQDQQQRRRPSLL
SEFHPGTERPPERRHGYEFHPLPAQPEHESMEAKRPRVEGTPEPHMPRPPPAGMVLPLPH
AIQDGLRTAGEVKKETQYSMKVEASSPGGLQSLGEDQDASPSKLSKEELIQSMDRVDREI
AKVEQQIFKLKKKQQQLEEEAAKPVEPEKPVSPPPVEHKHRSIVQIIYDENRKKAEEAHK
IFEGLGPKVELPLYNQPSDTKVYHDNIKTNQVMRKKLILFFKRRNHARKQREQKICQRYD
QLMEAWEKKVERMENNPRRKAKESRTREYYERQFPEIRKQREQQERFQRVGQRGTGLSAT
IARSEHEISEIIDGLSEQENNEKQMRQLSVIPPMMYDSEQRRVKFINMNGLMDDPMKVYK
SRQFMNVWTEHEKEIFKEKFVQHPKNFGLIASYLERKCVSDCVLYYYLTKKSQNYKTLVR
RNYGSRRRRNQQITRPSQEDKSEDKNEEDKLEKSEKKEDDEKKEEEEKDEKEDSKDIGKD
KEKCEGEDEEGKEQSTPRGRKTANSQGRRKGRITTRSMANEAAATAAEEPPPPPPEPALP
EPVPPPKPEPVQKPAREVAKLAPVTPMDAQARGSVEAGETSRWTEEEMEVAKKGLVEHGR
NWPAIAKMVGTKSEAQCKNFYFNYKRRHNLDNLLQQHKQVTRRLRERDASQSDSVATASA
DDDEENPDDSEGADNSSDTESAPSPSQADPSKPSDPLPNSGSGDGASEQDPAASKSNSAE
TKAQEPPYGDLQVKLEKSPEGGAASDGTNQEERARPAFEGQVHPKSEPQDAEMAGGMAVA
AAAGERGEIEVKMEPETREKAEKQGEQAHSDNDSSATCSADEDVEAEPDRQRIFSMDKPS
MLGGPSSVVVSSAKQAHLSVQQLHQRAANIPPMVSPPSSISYLSSRYPSLSSLRPRDWER
LGAGARAQSRSPSAQLPRYVSGPFGPAGVPVGAPLSGFAMFQHQIKAVHESAHLEDNQRQ
EAGDADRRPRFSTRSPVLDRDGKPFAYIPYDMKPVEQEPHGAAGRPGSPYRLSPREPSKA
SPQPDPNNPSRYSIPPVLQPAPNQVVQTLPDGMRMTFSRHRPANIPSPPPLIPTSKPTDK
PAFIQGGSILQGTPGTYLPPHTHAVYGAEGAKSAGGSISLGLPRQQDPSKPVSYIKQEEC
SPRGQTGQAEGLLSRAHYEPGVVRGAPMPAIQDLARGPTGKGPEGLPFRGGSITHGTPAL
PQSSIIAKLAAEDLSSPEKSRAEAMSKGHVIYESKSGHLISYDAIKNPREGTRSPRTSQE
LKRTYDMMDRGHPVRDSAPYEGLISRAQPRDSPLADSKDRPILGGSIMQGTPRTSSEAFD
EAKYGKQIKRESPPIRSFEGGITKGKPYEGVNTIKEMGRSIHEIPRKEMQDSRKTPVLEG
SITQGIPLKYDSSAVNQSAIKHNVKSLLTSPGKLPHPAMEAVERERMKYEDAKASERERV
RHTSVVNSTSVLRSTHQEANKSQLSPGMYEDANARRTPNYATSSISRGSPLLRAQEGGIT
SGKPVSHERKSTLTPTQRDSVPAKSPVSGGDPMASHSPFDPHHRPVGPGEVYRAHLPPHL
DPNLALHHRLLDPAAAYMFQRQPSPTGYPNTYQLYTMENTRQTILNDYITSQQMQVIPRP
DMARGLSPREQQQLAIPYPPGARGIIDLAQMPPTILLPHPGGTGSPTLDRITYIPGPQPP
FPPRVFNPASISPGHPSHLVASVERERERERERERERDREHREREKEREKEREREQRERE
WERERERERERERNEYLRGAAEQPGRPGSRGFLRSPSPSMRTQEGVVQQRPSIFQGTKSV
ITPLIRQMPSAAAAAQANSRYNTAADALAALVDAAASAPQMDVAKVKDNKHESAGPRESD
ISAARRAAAEQQEAERRSMQSPFGAMPLPGGKQNLPMYPDGGSTSDKDKAAPTKSRIEEE
LRTHGKTTITAASFIDVIITRQIASDKDSRVRGSQSSDSSGSLPSSRYEAQGSSAIEVIS
PASSPAQREEKSDGAFPPEKSSQPAPGPVRGFDMGRYRSPMESGPATSQPPTSTQTHRVM
TLADHISHIITQDFARNQDPPPSSALPSSSSSSTSISSTFQSSSGGGGSMGRSKGPNRYS
PENPVPSSHHQKPPSRVSPENASDKPRSRPGKSPERAGGVGGRGVESYEPISPPQSYSGL
EKPESSLIQGQRREQELSEQRTDSRSPGSGSYLPSFFTKLESTSPMVMSKKQEIFRKSEV
GNAQPGTEIFNIPAVTTSSNVNPRNHSFSDPASNLGLEDIIRKALMGNMEERPEEQTQQS
QSGGGMGGSSAGVGGVGEGRQEANPSPNTGRYSGKQKLQSKASSRKSKSPNPGQVYPGGE
RPSSVSSVHSEGEYHRQAPSWAWEDRPSSTGSMQFPYNPLTMQMLSSTPPTSMACPSPSM
QSQQQQPGGGTAPVGPARAWEQPLLSEQYETLSDSDD
NT seq
7494 nt
NT seq
+upstream
nt +downstream
nt
atgtccagctctggcttcccccccagccaggggagcttcagcagcgagcagagccgctac
ccaccacactcagtccagtacaccttcagccctgtgcgccatccaccggagttaacggtt
ccagaataccgcaattctcatctgcaggaccagcagcagcgtcgcagaccctcattgcta
tcagaattccaccctgggactgagaggcctccagagcgcaggcatggctacgagttccac
ccactgccggcgcagcctgagcacgagtccatggaggctaagcggcccagagtcgagggc
actcctgaaccccacatgccccgcccccctcctgcaggcatggttctgccacttccccat
gccatacaagacggcctcagaaccgctggagaggtcaagaaggagactcagtacagtatg
aaggtggaagcctcgtctccaggaggcctgcagtccctgggggaggaccaggatgcctct
ccctccaagctttccaaagaggagctgatccagagcatggaccgcgtggaccgagagatc
gccaaggttgagcagcagatcttcaagctgaagaagaagcagcaacaactggaggaggaa
gcagctaagcctgtggagccggaaaagccagtatctccaccacctgtggaacacaagcac
cggagcatcgttcagatcatctacgacgagaaccggaaaaaagctgaagaagcccataag
atcttcgaaggactcggcccaaaagtggagctgcccctatataaccagccatcagatact
aaagtataccatgacaacattaaaacaaatcaagtgatgaggaagaagctgattctgttc
ttcaagaggaggaaccacgcacgcaagcagagggagcagaagatctgtcagcgatacgac
cagctgatggaagcgtgggagaagaaagtggagcgcatggagaacaacccgcggcgcaaa
gccaaggagagccgtacgcgcgagtactacgagagacagttccccgagatccgcaaacag
cgcgagcagcaggaacgcttccaaagagtgggccagagagggacggggctgtcagccacc
atagcgaggagcgagcatgagatttcagagattatagacggcctgtcggaacaggagaac
aatgagaagcagatgaggcagctgtcagtcattccacccatgatgtatgactcggagcag
cggcgggtgaagtttatcaatatgaatgggctcatggatgatcctatgaaggtctacaag
tcccggcagttcatgaacgtctggaccgagcacgagaaggagatttttaaggagaagttc
gtgcagcacccgaagaactttggcctgatcgcctcttacctagagcgaaagtgtgtctcg
gattgtgtactgtactactacttgaccaagaagagccagaactataagacgctggttcgt
cgcaactacggcagccgccggcggaggaaccagcagataacccgaccctcacaagaagac
aagtcagaagacaaaaacgaggaggacaagttggagaaatcggagaagaaagaggacgac
gagaagaaggaagaggaggagaaagatgaaaaagaggactcaaaggacattggtaaagac
aaagagaagtgtgagggggaggacgaggagggcaaagagcagagcacgccacggggccgc
aagaccgccaacagccagggccgccgcaaaggccgcatcaccacccgctccatggccaac
gaggcagctgccacggctgcagaggagccgccgccccctccacctgaaccagctttgcct
gaacctgtccctcctcccaaacctgagccggtgcagaagcctgcacgagaggtggctaaa
ctcgctcctgtgaccccaatggatgcccaagcacgaggatccgtcgaggctggagagact
tctcgctggaccgaggaggagatggaggtcgccaaaaaaggactggtggaacatgggcgt
aactggccggccattgctaagatggtaggaaccaagagtgaggctcagtgcaagaacttc
tacttcaactacaagagacgccacaacctggacaacctgctgcagcagcacaagcaggtg
accaggcggttacgtgaacgggacgcatcacagagcgacagtgtagccacggcttcggct
gacgatgatgaggagaacccagatgacagcgaaggtgcagacaacagctcagacacggag
agcgctccatctccctctcaggccgacccttccaaaccctctgacccgctgcccaactcc
ggttctggggacggcgcctccgagcaggaccctgccgcctccaaaagcaacagtgcggaa
accaaagcccaggagcctccttacggtgatcttcaggtcaagctggagaagagtccagaa
ggaggagcggcaagcgatggcactaaccaggaagagcgggcgcggcctgccttcgagggt
caggttcaccccaaaagcgagccacaggacgctgaaatggccggtggaatggcggtggca
gcggcagctggggagagaggagagattgaggtgaagatggagccggaaaccagggagaaa
gcagagaaacaaggagaacaggctcactctgataacgactcgagtgccacgtgcagcgct
gacgaggacgtggaggccgagccagaccgacagaggatcttttctatggataagccatca
atgctcggaggtcccagctcagtggttgtctcctcagccaagcaggcccatctcagcgta
cagcagctccatcagcgggccgccaacatccctcccatggtcagtccccctagctccatc
tcctacttatctagcagatacccctccttatccagcctcaggcccagggactgggagagg
ctcggagccggagccagggcccagagccggtctccctcagctcagctgccacgctacgtg
tctggtcctttcgggccagccggggtccctgtgggagctcctctaagtggctttgccatg
ttccagcaccagatcaaagctgtgcatgagtctgcccacctggaggacaaccagcggcag
gaggctggtgatgcagaccgccgtcctcgcttcagcacccgtagccccgtactggatcgg
gatggtaaaccgtttgcctacataccttacgacatgaagccggtggagcaggagcctcat
ggtgcagcaggcaggccaggatcaccctacaggctgtctccaagagagcccagcaaagcc
tcaccccaaccagatcccaacaacccctcacgctacagcatcccaccagtcctgcagccg
gctcctaaccaggtggttcagacccttccagatggaatgcgcatgacattctcccgccac
agaccggccaacattccatctccaccccccctcattcccacctccaaacccactgacaag
cccgccttcatccagggaggatcaattttgcagggaacaccgggcacgtatctgcccccc
cacacgcacgctgtttatggggcagagggggccaagagcgctggaggatccatctcactc
ggcctgccaagacaacaggacccttccaagcctgtgtcctacataaagcaagaggagtgt
tctccacgtgggcagacgggtcaggctgaagggctgctctccagagcgcattacgagccc
ggagtggtcagaggagcaccaatgcctgccatccaggatctggccagaggccccacggga
aaaggcccagagggacttcccttcagaggaggctccattacacatggcactcctgctctg
ccccagtccagcatcatcgctaaactggccgctgaggacctgtccagcccggagaagagc
cgggcagaggcaatgtccaagggacacgtcatctatgagagcaagagcggccatctcatc
tcctatgatgccattaagaaccccagagaaggtactaggagcccaaggacgagtcaagag
ctcaagcgcacttatgacatgatggatagaggtcaccctgtacgggattctgcaccttat
gaaggtttgatcagtagagcacaacccagagacagcccactggcagattctaaagaccgg
cccattctcggaggatccatcatgcaaggaacaccaagaacatcatctgaagcttttgat
gaagcaaagtatggcaagcagattaagagggagagcccacccatccgttcatttgagggg
ggaattaccaagggcaagccctatgagggcgttaacaccattaaagagatgggtcgctcc
attcatgagatcccacgtaaagagatgcaggatagccgcaagaccccggtcctggaggga
tctattacccagggcatccctctgaagtatgacagcagcgctgtgaaccagtcggccatc
aaacacaacgtaaagtccctcctcaccagcccggggaagctgccgcaccccgccatggag
gcggttgaacgcgagcgcatgaagtacgaggacgccaaggcctcggagcgggagcgtgtg
cgccacacatccgtagtcaactccacttcagtgctgcgctccacacaccaggaggccaac
aagtcacaactcagccctggcatgtacgaggacgccaatgcacgcaggacccccaactac
gccaccagctctatctccaggggatcgcctttgctgcgggcacaggagggagggataaca
tcaggcaaacctgtatctcatgagaggaagagcactctgaccccgacccagagagacagc
gttccagccaagtctcccgtctccggaggcgacccgatggcctcgcacagcccgttcgac
cctcatcataggcctgtggggcctggagaggtgtaccgagcccacttaccccctcatcta
gaccccaacctcgccctgcaccatcgcttgcttgacccagctgcagcgtacatgttccag
cgccagccgtctcccaccggttaccccaacacctaccagctctacaccatggagaacacg
cggcagaccatcctcaacgactacatcacctcccagcagatgcaggtcatcccacggccc
gacatggcgagggggctctcgcctcgggagcagcagcagctcgccatcccgtaccctccc
ggagccagaggtataattgatctagcccagatgcctcccaccatcctgttgcctcacccc
gggggaacaggttcccccaccctggaccgcatcacgtacatccccggacctcagccccct
tttcctcctagggttttcaaccccgcctccatatctccaggacatcccagccatttggta
gccagcgtagagcgggagcgcgagagggagcgagaacgagagcgagagagggatcgtgag
cacagagagcgggagaaagagagggagaaggagcgagagagggagcagagggagagagag
tgggaacgagagagggagcgagagagggagcgcgagcgtaatgaatacctgcgtggagct
gcagagcagcccggcaggcccggcagccgtggtttcctgcgttccccctccccttcgatg
aggacacaggagggtgtcgtccagcagaggcccagcatcttccaaggcaccaaaagtgtg
atcactccgctgatcaggcagatgccctccgcagcggccgcagcccaggccaactctcgc
tacaacactgccgcggacgctctggccgccctggtggacgccgccgcctccgcccctcag
atggacgtggccaaggtgaaggacaataagcacgagagcgccggcccgcgggaaagcgac
atcagcgcggcccgacgggcagcagccgagcagcaggaggccgagcgccgctccatgcag
tcccccttcggagccatgccacttccaggggggaagcagaaccttcctatgtacccagac
ggcgggagcacgagtgacaaagacaaagccgcgcccacaaagtcccgcatagaggaggaa
ctacgcacccacggcaaaaccaccatcaccgcagccagcttcatcgatgttatcatcacg
cgccagattgcctctgacaaggactcccgggtgaggggatcgcagagctcagactcctct
ggcagcttgccctcaagccgctatgaggcacaaggtagtagtgctatcgaggtgatcagt
ccagccagttctccagcacagagagaggagaaaagtgatggagccttccctccagagaag
agctctcagcctgccccaggtcctgttagagggttcgatatgggtcggtacagatcaccg
atggaatctggaccggcgacatcacagccacctacttccacccagacacaccgtgtcatg
accctggctgaccacatctcgcatatcatcacgcaggactttgccaggaaccaggaccct
cctccatccagtgcactgccttcctcttcctcctcctccacttcaatttcctctacattc
caaagctctagtggaggaggaggctccatggggcggtccaaaggaccgaaccgctacagc
ccagagaaccccgtaccctcctcacaccatcagaaaccacccagccgagtgtctcctgag
aacgcctccgacaagccgagatccaggccagggaagtctccagagcgtgctggtggggta
ggaggtcgaggggtggagagctatgagcccatctccccacctcagagctactccggcctg
gagaaaccggagagcagcctgatccagggccagagacgtgaacaggagctctccgagcag
aggacggactcacgctccccgggcagcggcagctatctgccctccttcttcaccaagctg
gagagcacctcccccatggtgatgtccaaaaagcaggagatctttcgcaagtctgaagtt
ggtaatgcacagccaggcacagagatattcaatataccagctgtaacaacttcaagtaat
gtgaaccccaggaaccactcgttcagtgacccggccagtaacctgggtctggaggacatc
atccgcaaggctctgatggggaacatggaggagaggccggaggagcagacgcaacagtcc
cagtctggagggggaatgggaggcagctcagctggagttgggggtgttggcgaggggaga
caggaggccaatccttcccccaacacaggtagatattctggaaagcagaagctccagagc
aaagccagcagcaggaagtccaagtcccccaacccagggcaggtgtacccgggcggggag
cggccgtcctctgtgtcctcggttcattcagagggggagtaccacaggcaggccccgagc
tgggcctgggaggaccggccttcatccacaggttccatgcagttcccctataaccctttg
actatgcagatgttgagtagcaccccgcccacctccatggcctgcccgtctccctccatg
cagtcccagcagcagcagccagggggcggcaccgcacccgtgggtccggccagagcctgg
gagcagcctctgctctcggaacagtacgaaaccctgtcggacagcgacgactga
DBGET
integrated database retrieval system
