Astyanax mexicanus (Mexican tetra): 103035643
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Entry
103035643 CDS
T05042
Symbol
irf2bpl
Name
(RefSeq) probable E3 ubiquitin-protein ligase IRF2BPL
KO
K22383
interferon regulatory factor 2-binding protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amex03000
]
103035643 (irf2bpl)
04121 Ubiquitin system [BR:
amex04121
]
103035643 (irf2bpl)
Transcription factors [BR:
amex03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
103035643 (irf2bpl)
Ubiquitin system [BR:
amex04121
]
Ubiquitin ligases (E3)
Atypical E3
103035643 (irf2bpl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF-2BP1_2
zf-C3HC4
DUF7623
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
103035643
NCBI-ProteinID:
XP_007251981
LinkDB
All DBs
Position
14:18447994..18451268
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AA seq
698 aa
AA seq
DB search
MSSAQVASSRRQSCYLCDLPRMPWAMIWDFTEPVCRGCVNYEGADRIEFVIETARHLKRA
HGFQDGRSPGPGGAGVVPPLPVPPPPLPPPPSSSSSSLPPLPSVKSHGKETTVQLNHVDG
TSKQAQQQQAGLERCYSSRFDYTGTGMSAHAARLPNGLLNGFPKTDDGPPELNRQSPNSR
RGGGTHGLVSLPAQMSVPPNLLPQTMLNGPASGLAARAPPSSSSSSSSSSSALGLSEPGK
RPASVSSTDQEREARERQRNAEALSELGESLRNRAEEWASKPKLVRDTLLTLTGCAPFDV
RFKKDHALAGRVFAFDAVAKPGADYELKIFVEYPSGSGTVFSSASGVAKQMYHDCMKDYG
RGLSSGFKYLEYEKKHGTGDWRLLGDLLPEPVRFFKETLGADMLPQPHVDAGCPLLPSSA
LAGMLPRALPASSAASASALRAGARKRKASPEPDSLEERQQQQQQWMASQNALAAVGGSF
GACHGGPPPPLGPVHASRATPPEPAQNGQSPMAALMSVADALGGGGGGGGGGAHSPKDAN
SVHSTTSARHGSTGSGGSGGGSSPVSPASVSGQRRLASRNGDSQQQQQQQAHAEHAGAHG
AHGVPDSPMAGSGPLCCTICHERLEDTHFVQCPSVPGHKFCFPCSRESIKAQGATGEVYC
PSGEKCPLVGSNVPWAFMQGEIATILAGDVKVKKERDP
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccgcgcaggtcgcttcgtcacggcggcagtcgtgctacctgtgcgacctgccc
cgcatgccatgggctatgatttgggacttcacggagcccgtgtgccgcggctgtgtaaac
tacgagggcgcagaccgcatcgagttcgtgatcgagaccgcgcggcacctcaagcgcgcg
cacggattccaagacggacgctctccgggcccgggaggcgcgggggtcgtaccaccgctg
ccggtgcccccgccgccgctgccacctccaccgtcgtcctcgtcgtcgtcgctgcctccg
ctgccctccgtgaagtcgcacggaaaggagaccacagtgcagctaaaccacgtggacggc
acaagcaagcaagcgcagcagcaacaagcgggactcgagcgctgctactcctcgcgcttc
gactacacgggcacgggcatgagcgcgcacgcggcgcgcctccccaacggcctcctgaac
ggctttccgaagacggacgacggacctcccgagctaaaccgccagagccccaactcgagg
cggggcggcggcactcacggactggtttctctgcctgcgcagatgagcgtgccccctaac
ctgctcccacagaccatgcttaacggacccgcttcgggcctggccgcgcgcgcacctccc
tcctcatcgtcttcatcctcctcctcgtcgtccgctcttggactttcggaaccgggcaag
cgccccgcgtccgtctcgagcacggatcaagagcgcgaggcgcgcgagaggcagcgcaac
gccgaggctctgtccgagctcggggaaagtctacgcaaccgagctgaagagtgggcgagc
aagcccaagctcgtgcgcgacactctgcttacactgactggatgtgcgcccttcgacgtg
cgcttcaaaaaggaccacgcgctcgcgggccgcgtgttcgccttcgacgctgtagccaag
ccgggcgcagactacgagctaaaaatcttcgtagagtacccgagcggctccggcaccgtc
ttctcgagcgcttcaggggtcgccaagcagatgtatcatgactgcatgaaggactacggc
cgtggcctttcgtccggcttcaagtacctcgagtacgagaagaaacacggcaccggcgac
tggcgtctcctcggcgacctgctgcccgagcccgtgcgctttttcaaggaaaccctgggt
gccgacatgctcccccagccgcacgtggacgcgggctgccctctactcccctcttcggct
cttgccggcatgctcccacgcgccttaccggcttcatctgctgcatctgcaagcgcgctg
cgggcgggagcccgcaaacgcaaagcctctccggaaccggactcgctcgaggagcgacag
cagcagcaacagcaatggatggccagccaaaatgcgttggccgcggtggggggctcattc
ggggcatgccacggaggaccaccaccaccattgggccctgtacatgctagccgggccact
cctccagaacctgcacagaacggacagtcgcccatggcggcgctcatgtcggtagcggac
gctctaggcggtggaggtggaggcggcggcgggggcgcgcattccccgaaggacgcaaac
tctgtgcactccactacatccgcacgccacggcagcaccggcagcggcggcagtggcgga
ggtagcagtcccgtatctccggcttcggtctcaggccagcggcgcttggcctcgcgcaac
ggcgactcacagcagcagcaacagcagcaggcgcacgcggagcacgccggtgcgcacggg
gcccacggcgtacctgactctcccatggctggcagcggtcctctgtgctgcaccatttgc
cacgagcgcctggaggacacacacttcgtgcagtgcccctcggtacccggccacaagttc
tgcttcccgtgctcgcgcgagagcatcaaggcgcaaggcgccacgggcgaggtgtactgc
cccagcggagaaaaatgccccctggtcggctccaacgtgccttgggctttcatgcaaggg
gagatagcgaccattctggccggagatgtgaaggtgaaaaaggagagggacccttga
DBGET
integrated database retrieval system
