KEGG   Astyanax mexicanus (Mexican tetra): 103035667
Entry
103035667         CDS       T05042                                 
Symbol
smek1
Name
(RefSeq) serine/threonine-protein phosphatase 4 regulatory subunit 3
  KO
K17491  protein phosphatase 4 regulatory subunit 3
Organism
amex  Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:amex00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:amex01009]
    103035667 (smek1)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:amex03400]
    103035667 (smek1)
Protein phosphatases and associated proteins [BR:amex01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-4
    Regulatory subunits
     103035667 (smek1)
DNA repair and recombination proteins [BR:amex03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    Protein phosphatase 4
     103035667 (smek1)
SSDB
Motif
Pfam: PP4R3 EVH1_PP4R3 WH1 Ran_BP1 TMEM164
Other DBs
NCBI-GeneID: 103035667
NCBI-ProteinID: XP_007233698
Ensembl: ENSAMXG00000002105
UniProt: A0A8B9GS95 W5K3I6
LinkDB
Position
1:51836065..51859027
AA seq 818 aa
MTDTRRRVKVYTLNEDRQWDDRGTGHVSSGYVERLKGMSLLVRAESDGSLLLESKINPNT
AYQKQQDTLIVWSEAENYDLALSFQEKAGCDEIWEKICQVQGKDPSVDITQELIDESEEE
RFEDMSSPGLELPPCELSRLEEVAELVASSLPSPQRREKLALALENEGYIRKLLELFRVC
EDLENREGLHHLYDIIKGIFLLNRTALFEVMFSEECIMDVIGCLEFDPALPQPRRHREFL
TTTARFKEVIPITDPELRQKIHQTYRVQYIQDMVLPTPSVFEENMLSTLHSFIFFNKVEI
VGMLQDDEKFLTELFAQLTDEATDDDKRHELVNFLKEFCAFSQTLQPQNRDAFFKTLSNM
GILPALEVILGMDDVQVRGAATDIFSYLVEYNPSMVREFVMQESQQNDDDILLINLIIEH
MICDTDPELGGAVQLMGLLRTLVDPENMLATANKTEKTEFLSFFYKHCTHVLSAPLLANT
TEEKPSKDDFQTCQLLALIVELLTFCVEHHTYHIKNYIINKDILRRVLVLTASQHAFLAL
CSLRFMRKIIGLKDEFYNRYIMRNFLFEPVVKAFLNNGSRYNLINSAIIEMFEYVRVEDV
KSLTAHIIENYWKALEDVDYVQTFKGLKLRYEQQRERQDNPKLDSMRSILRNHRFRRDAR
TLEDEEEMWFNTDEDDLEDGEAVVPPSDKMKNDEDLMDPISKFMERKKLKESEEKEVLTG
KSSLSGRQSPSFKLSFSSSPKSSLSSPPTASLHPGSPGSPGSPGTGARNSPPMAAVTTKS
GLVGLVDYPDDDEEDEDEDDSDSKEGSPPLSKKSKLSS
NT seq 2457 nt   +upstreamnt  +downstreamnt
atgactgacactcggcggcgggtgaaggtctacactctgaatgaagaccggcagtgggat
gaccgagggacgggccatgtgtcctccggatacgtcgagagactcaaaggcatgtcgctg
ttggtgcgcgccgaaagtgacgggtctctgctgctggagtcaaaaattaaccccaacacc
gcctatcaaaaacagcaggacacattaattgtgtggtctgaagcagaaaactatgatctg
gccctcagttttcaggagaaagctggctgcgatgagatctgggagaagatatgtcaggtt
caaggcaaggacccctcagtggacattacccaggagctcattgatgagtcagaggaggag
cgctttgaggacatgtcctcccctgggctggagctgcctccttgtgagctctctcgtctg
gaggaggtggccgagctggtagcctcgtcgctgccctcgccccaacggcgtgaaaaactg
gccttggcactggaaaacgagggctacattcgcaagctacttgagctgtttcgtgtatgt
gaagacctggagaaccgtgaaggcctacaccacctgtatgacatcatcaagggcatattc
ttgctcaaccgcactgcactctttgaagtcatgttctcagaagagtgcatcatggacgtg
attggctgcttggagttcgacccggccctgcctcagccacggcgccaccgtgagttcctt
acaactacagccaggtttaaagaagtcatccccatcacagacccagagttacgtcagaag
attcaccagacataccgggtccagtacatccaggacatggtgctgcccacgccgtccgtg
tttgaggagaacatgctttccaccctgcactccttcatcttctttaacaaggtggagatt
gttggaatgctccaggatgacgagaagtttctaacggagctctttgcacagctaactgat
gaagccacagatgacgacaaacggcacgaattggttaatttcctgaaggagttttgtgcg
ttttctcagactttacaaccacaaaacagagatgctttttttaaaacgctctcaaatatg
ggcattctaccagcactggaagttatcctggggatggacgatgtgcaggtgcgaggagca
gccacagatattttctcctatttggtagagtacaatccttctatggtgcgtgaatttgtc
atgcaggagtcccaacaaaatgatgatgatatcctgttgataaatctgatcatcgaacac
atgatctgtgatacagatcctgagcttggaggagctgtgcaactaatggggctgctaagg
accctggtagaccctgaaaacatgctggcaactgctaataagactgaaaagacagaattt
ttaagtttcttttataaacattgtacgcatgtgctatctgctccacttctggccaatacc
actgaggaaaaacccagcaaagatgatttccagacatgccagctgttggctctgattgta
gagctcctcaccttttgtgtcgaacatcacacgtatcacataaaaaattacatcatcaac
aaagacatcctccgtcgagtgctggtgctcactgcctcccagcatgcttttttagcacta
tgttctttgcgtttcatgagaaaaattataggactgaaagatgagttctacaaccgttac
ataatgaggaacttcctctttgagccagtggtcaaagcgttcctcaacaacggctcgcgt
tacaatctcatcaactcagccatcatagagatgtttgaatatgtccgtgtggaagatgtg
aaatccctaacggctcatatcatagagaactactggaaggccctggaggatgttgactat
gtacagacatttaagggtctcaagctccgttatgagcagcagcgggaaaggcaggacaac
cccaaacttgacagcatgcggtcgattctgcggaaccaccggttcagacgggatgcacgg
acgttggaggacgaagaagagatgtggtttaacacagatgaagatgacctggaggacggt
gaggcagtggtgcccccttcggataagatgaagaatgatgaggatctgatggatcccatt
agcaagttcatggaaagaaagaaattgaaagaatcagaggagaaagaagttttgacggga
aagtcaagcctgtccgggcgacagagtcctagttttaagctatctttctctagttcgcct
aagtctagtttgtcctcgccgcccacagcctctctccaccctggctcaccaggatctccc
ggatctcctggtacgggggccagaaactccccgcctatggcagctgtcaccactaagagt
ggtttggtgggactggtggactatccggacgacgatgaggaggatgaggatgaggacgat
tcagacagtaaagaggggagtcctccactgtccaagaaatcaaagctgagctcttaa

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