Astyanax mexicanus (Mexican tetra): 103035744
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Entry
103035744 CDS
T05042
Symbol
zswim6
Name
(RefSeq) zinc finger SWIM domain-containing protein 6
KO
K25704
zinc finger SWIM domain-containing protein 6
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
amex03037
]
103035744 (zswim6)
Cilium and associated proteins [BR:
amex03037
]
Other cilia and associated proteins
Stereociliary proteins
103035744 (zswim6)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ZSWIM4-8_C
ZSWIM_N
TPR_ZSWIM8
DUF6247
Motif
Other DBs
NCBI-GeneID:
103035744
NCBI-ProteinID:
XP_022536514
Ensembl:
ENSAMXG00000019637
UniProt:
A0A3B1JY10
LinkDB
All DBs
Position
20
Genome browser
AA seq
1139 aa
AA seq
DB search
MAERVQQPPAKRLCCRPGYGTACRQGQRPGGTVCGGGAGGASGSGQGGPSRTHSPESLLD
IAARRVAEKWPFQRVEERFERIPEPVQRRIVYWSFPRSEREICMYSSFNTGAEESAAAAE
GSDETRLPFRRGIALLESGCVDNVLQVGFHLSGTVTEPATASEPEVVCSVAISFDRCKIT
SVTCGCGNKDIFYCAHVVALSLYRVRRPEQVKLHLPISETLFQMNRDQLQKFVQYLITVH
HTEVLPTAQKLADEILSQNSEINQVHGAPDPTAGASVDDENCWHLDEEQVQEQVKLFLSQ
GGYHGSGKQLNLLFSKVREMLKMRDSNGARMLTLITEQFMADPRLALWRQQGTTMTDKYR
QLWDELGALWMCIVLNPHCKAEQKAAWLRQLKKWNGVDVCPWEDGNHGNELPNLTNALPQ
GAHGNQDSGTRPHRTVFTRAIEACDLHWQDSHLQHIISDDLYTNYCYHDNTENSLFDSRS
WPLWHEHVPTACARVDALRSHGYPREALRLAIAIVNTLRRQQQKQLELFRNHKKDLLHKG
MTSITNLEGWVGHPLDPIGTLFSTLMETGRSDEENSQGGFLDFSGTMSSSKHVDLHLFPS
ARRFLEEGESYLALAVETALMGLGQQRIMPDGLYAQEKVCRNEEHLIAKLQEVELDDSLV
KIFRKQAVFLLEGGPYSGLGEIIYRESVPMHTFAKYLFTSLLPHDAELAYKIALRAMRLP
VLESTAPSGDMSRPHHIVSVVPNRYPRWFTLSHIESQQCELASTMLTAAKGDARKLETVL
ESIQKNIHSSSHIFKLAQDAFKIATLMDSLPDITLLKVSLELGLQVMRMTLSTLNWRRRE
MVRWLVTCATEVGVYALDSIMQSWFTLFTPTEATSIVATTVMSNSTIVRLHLDCHQQENL
ANSARTLALQCAMKDPQNCALSALTLCEKDHIAFETAYQIVLDAATTGMSYTQLFTIARY
MEHRGYPMRAYKLATLAMAHLNLSYNQDTHPAINDVLWACALSHSLGKNELAAIIPLVVK
SVKCATVLSDILRRCTLTTPGMVALHSRRNSGKLMSLDKAPLRQLLDATIGAYINTTHSR
LTHISPRHYSEFIEFLSKARETFLMAHDGHIQFTQFIDNLKQIYKGKKKLMMLVRERFG
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atggcggagcgcgttcagcagcccccagctaaacggctctgctgccgacccgggtacggc
acggcgtgcaggcaggggcagcggcccggcgggacagtatgcggcggaggcgccggtgga
gcttcgggctccggccaggggggaccgagcaggacacacagcccggagtcgctgttggac
attgcggcgaggcgagtggccgagaagtggccgttccagcgggtggaggagcgcttcgag
cgcatcccggagcccgtgcagcggcggatcgtgtactggtcgtttccgcggagcgaacgg
gagatctgcatgtattcatcgttcaacacgggcgcggaggagagcgcggcggccgcggaa
ggcagcgacgagacccggctgcccttccgacggggcatagcgctgctggagagcggctgc
gtggacaacgtgctgcaagtcggttttcatctcagcgggacagtaacagaaccggcgacg
gcttcggagccggaggtggtgtgcagcgtggccatcagcttcgaccgctgtaagatcacc
tcggtgacgtgcggctgcggcaacaaggacatcttctactgtgctcacgtggtggcgctc
agcctgtaccgcgtacggcggcccgagcaggtcaaactgcacctgcccatttcagagacg
ctcttccagatgaaccgggaccagctgcagaagttcgtacagtacctcatcaccgtccat
cacaccgaggttctgcccacggcccagaaactggcggacgaaatcctctcacagaactcc
gagatcaaccaagtgcacggggccccggaccccacggcaggggccagcgtggacgatgag
aactgctggcatcttgatgaagagcaggtccaggaacaggtcaagctcttcctgtcccag
gggggctaccacggctcgggcaagcagctcaacctcctcttctccaaggtgcgggagatg
ctgaagatgcgggactcgaatggggcgcggatgctgacgctgatcacagaacagttcatg
gctgatcctcgtctggctctgtggagacaacagggaaccaccatgacggataaataccga
cagctctgggacgaactgggtgccttgtggatgtgcatcgtgttgaatcctcactgtaag
gcggagcagaaggcggcgtggctccggcagctcaagaagtggaacggcgtggacgtgtgc
ccctgggaggacggtaaccacggcaacgagctgcccaatttaaccaacgctttgcctcag
ggtgcgcacggcaaccaagactcggggacccggccgcaccggaccgtgttcacgcgggcc
atcgaggcgtgcgatctccactggcaggacagccacttacagcacatcatcagcgacgac
ctctataccaactactgttaccatgacaacactgaaaattcactctttgactctcgcagc
tggcccctgtggcacgagcacgtcccgacggcctgcgccagggtggatgcactgaggtct
cacggttacccacgggaagcactgcgactggccatcgctatcgtcaacaccctgcgccgg
cagcagcagaagcagctggagctcttccgcaaccacaagaaagatctgctacataaaggg
atgacctccatcactaatctggaggggtgggtgggtcacccgttagaccccatcgggacc
ctcttcagtacgctgatggagacggggcggagcgacgaggaaaactcacaaggaggcttc
ctggacttctcaggtacgatgagctccagtaagcacgtggacctgcacctgttcccgtcg
gcgcggcgcttcctggaggagggcgagtcgtacctggcgctggcggtggagacggcgctg
atgggtctgggtcagcagaggatcatgcccgacggcctctacgcccaggagaaggtctgc
cgcaacgaggagcacctcatcgccaagctgcaggaggtggagctggacgactcgctcgtc
aaaatcttccgcaagcaagctgtcttcctcctagagggtgggccctacagtggactgggg
gaaataatctacagagagagcgttcccatgcacacgtttgccaagtatctcttcacctcc
ctcctacctcacgatgccgaactggcatataaaattgcactgagagcaatgcggttacca
gtgttggaatcgacggctccctccggcgacatgtcccggcctcaccatatagtatctgtt
gtgccgaaccgctacccacgatggttcaccctcagccacatcgagtcccagcagtgtgag
ctggcctccaccatgctcactgcagccaaaggtgacgctcgaaagttggaaacagtgtta
gagtccatccagaagaacatccactcgtcctctcatatctttaaactggcgcaggatgcc
tttaaaatcgccacgctgatggacagcctgccggacatcactctgctaaaagtgtccctg
gagctgggccttcaggttatgcggatgacgctctctacactgaactggcggaggcgagag
atggtgcgatggttggtcacttgtgccacagaagtcggagtctacgcactggacagcatc
atgcagagctggttcaccctcttcacgcccaccgaggccaccagcatcgtggccaccacc
gtgatgtccaacagcaccatcgtccggctgcacctggactgccaccagcaggagaacctg
gccaacagcgcgcggacgctggccctgcagtgcgccatgaaggacccgcagaactgcgcc
ctgtcggcgctcacgctctgcgagaaggaccacatcgccttcgagacggcctaccagatc
gtgctggacgccgccaccacgggcatgagctacacgcagctgttcaccatcgcgcgctac
atggagcaccgcggctaccccatgcgcgcctacaagctggccaccctggccatggcccac
ctcaacctcagctacaaccaggacacgcacccggccatcaacgacgtgctgtgggcctgc
gccctcagccactcgctgggcaagaacgagctggccgccatcatccccctggtggtgaaa
agcgtgaagtgcgccaccgtgctctcggacattttgcggcggtgcacgctcaccaccccg
ggcatggtggcgctccacagccgcaggaactctggcaagctgatgtcgctggacaaggcg
ccgctgcggcagctgctggacgccacgatcggcgcgtacatcaacaccacgcactcgcgg
ctcacgcacatcagcccgcggcactacagcgagttcatcgagttcctcagcaaggcgcgt
gagaccttcctcatggcgcacgacggacacattcagttcacgcagttcatagacaaccta
aaacagatttacaaaggcaaaaagaaactgatgatgctcgtgcgggagaggttcggctga
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