Astyanax mexicanus (Mexican tetra): 103035799
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Entry
103035799 CDS
T05042
Symbol
dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103035799 (dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
amex03041
]
103035799 (dhx8)
Enzymes [BR:
amex01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103035799 (dhx8)
Spliceosome [BR:
amex03041
]
Complex C
Other components
Step II factors
103035799 (dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_16
T2SSE
TsaE
PhoH
Flavi_DEAD
Sigma54_activ_2
ABC_tran
Motif
Other DBs
NCBI-GeneID:
103035799
NCBI-ProteinID:
XP_007259202
Ensembl:
ENSAMXG00000009430
UniProt:
A0A8B9K808
LinkDB
All DBs
Position
15:complement(29218695..29232014)
Genome browser
AA seq
1240 aa
AA seq
DB search
MVDVGEDELKQLEYLSLVSKVCTELDNHLGISDKDLAEFVISLAEKNPTFDGFKSVLLKN
GAEFTDSLISNLLRLIQTMRPPPEPSTSKGEPVVKPKSEKDKLKELFPALCRPDNPTTRT
MLDEDDVKVAADAMKELEMFMPSACGPDTKSSKHRSEGASSSKKSRRSRSRSRDRDRERD
RDRDRDRDRDRDRRRRHRSRSRSRSRSRSPVKERRRKTRWHSRSRSRSPGRGDRGERGER
GDKGDRERGDRGDRERGDRGDREKVSDRWKDKHVDRPPPEEPSVGDIYNGKVTSIMQFGC
FVQLEGLRKRWEGLVHISELRREGRVANVADVVSKGQRVKVKVLSFTGSKTSLSMKDVDQ
DTGEDLNPNRRRNVGGEGQEESAMRNPDRPTNLNLGHAPEVEDDTLERKRLTKISDPEKW
EIKQMIAANVLSKEEFPDFDEETGILPKVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMS
PVKIVKNPDGSLSQAAMMQSALAKERREVKQAQREAEMDSIPMGLNKHWVDPLPDTDGRQ
IAANMRGIGMMPNDIPEWKKHAFGGNKASYGKKTQLSIIEQRESLPIYKLKEQLIQAVHD
NQILIVIGETGSGKTTQITQYLAEAGYTTRGKIGCTQPRRVAAMSVAKRVSEEYGCCLGQ
EVGYTIRFEDCTSPETVIKYMTDGMLLRECLIDPDLGQYAIIMLDEAHERTIHTDVLFGL
LKKTVQKRTDMKLIVTSATLDAVKFSQYFYEAPIFTIPGRTYPVEVLYTKEPETDYLDAS
LITVMQIHLTEPPGDILVFLTGQEEIDTACEILYERMKSLGPDVPELIILPVYSALPSEM
QTRIFDPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPIS
QAQAKQRAGRAGRTGPGKCYRLYTERAYRDEMLTTNVPEIQRTNLASTVLSLKAMGINDL
LSFDFMDAPPMETLITAMEQLYTLGALDDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLG
CSEEMLTIVSMLSVQNVFYRPKDKQALADQKKAKFHQPEGDHLTLLAVYNSWKNNKFSNP
WCYENFIQARSLRRAQDIRKQMLGIMDRHKLDVFSCGKATVRVQKAICSGFFRNAAKKDP
QEGYRTLIDQQVVYIHPSSALFNRQPEWVVYHELVLTTKEYMREVTTIDPRWLVEFAPAF
FKVSDPTRLSKQKKQQRLEPLYNRYEEPNAWRISRAFRRR
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggtggatgtgggagaagacgagctgaaacagcttgagtatctgtctctagtgtctaaa
gtctgtactgagctcgataaccacttggggatcagcgacaaagacctggctgagtttgtc
atcagtcttgcagagaaaaacccaacatttgatggcttcaaatcagtgctgctcaaaaat
ggagctgagtttacggactcgctcatcagcaatctgcttcgtctcattcaaaccatgcga
ccaccacctgaaccatccacaagtaaaggtgagccggttgtcaagccaaagagtgagaaa
gacaagttaaaggagctgtttccagccctctgcagaccagacaatcccaccaccaggacc
atgctggatgaagatgatgtgaaggttgcagccgatgcaatgaaagagttggagatgttt
atgcccagtgcttgtggaccagacacaaagagcagcaaacacagatctgaaggtgccagc
agcagcaagaaaagtcgcagaagccgcagtcggagcagagatcgagacagagaaagagac
agagatcgagacagggaccgggatagagacagggacaggaggagacgtcaccgctcacgt
tcacgctcccgctctagatctcgttctccagttaaggagagaagacgcaagacccgctgg
cattcccgcagtcggtccaggagtcctggccgaggagatcgtggagaaagaggagaacga
ggggataaaggagatagagaacgaggggatagaggagatagagaacgaggggatagagga
gatagagaaaaggtttcagaccgctggaaggacaaacatgtggaccgcccacccccagag
gagccatcagtgggagacatctacaatggcaaagtcaccagcatcatgcagtttggctgt
tttgttcagctagaggggttgaggaaacgttgggaagggttggttcacatctctgaactt
aggagagagggcagagtggcaaatgtggcagacgtggtcagcaaaggtcaaagggtcaaa
gtcaaggtgttgtcctttacaggctctaagaccagtctcagcatgaaggatgttgaccaa
gacacgggtgaggacttgaaccccaacaggagaaggaatgttgggggagagggtcaggaa
gaatcagccatgaggaacccagacagacccaccaaccttaatctgggtcatgctcctgag
gtggaggatgacacactagaacgcaagagactcaccaagatctctgatcctgagaaatgg
gagatcaaacaaatgattgctgctaatgtcctctcaaaagaagagttcccagactttgat
gaggaaactgggatcctgcctaaagttgatgatgaagaagatgaggaccttgaaattgaa
ctggtggaagaagaaccgcctttcctgcgtgggcacaccaaacagagcatggatatgagt
cctgtgaaaattgtgaagaaccctgatggctcactgtctcaggcagccatgatgcagagt
gctctggctaaagagcgaagggaagtgaagcaggcacagcgggaagctgagatggactcc
atccccatgggcctcaacaaacactgggtcgaccctctgcctgacacggatggaaggcag
attgccgccaacatgaggggcatcggcatgatgcccaatgacatccctgagtggaagaaa
catgctttcggcggcaataaggcctcatatggaaagaagacacagctgtccatcattgag
cagagagagagtctgcccatctacaagcttaaagagcaactcattcaggctgttcatgat
aaccagattctgattgtgattggagagacgggctctgggaaaaccactcaaatcactcag
tacctagctgaggccggatacacaacacgtgggaagatagggtgcacacaacccagaaga
gtggctgccatgtctgtggctaagagagtgtctgaagagtatgggtgttgtttgggacag
gaggttggttataccatccgttttgaggattgtacgagtccggagactgtcatcaagtac
atgacggacggtatgctgctgagagagtgcctgattgaccctgatttgggccagtatgcc
atcattatgttggacgaggctcacgagagaaccatccacactgatgtactcttcggctta
cttaaaaagacagtacagaagcgcacagacatgaagctcattgtgacatctgctacactg
gatgctgtgaagttctcacagtatttctatgaagcccccattttcaccatccctggtcgt
acctaccctgtagaagttctatacactaaagaacctgagacagactacctggatgccagt
ttaataacggtcatgcagatccacctcacagagcctccaggcgacattctggtgttcttg
acgggtcaggaagaaatcgacacggcgtgcgagatcctttacgagcgaatgaaatcactc
ggacctgacgttcctgagttgatcattctgcctgtgtactctgccttgcccagcgagatg
cagaccaggatctttgacccagctccacctggaagcagaaaggtggtcattgctacaaac
attgctgagacttcactgaccattgatgggatctactatgtggtggatccaggttttgtc
aagcagaaagtgtacaactccaaaacaggcattgaccagctagtggtgactccaatctct
caggcccaagctaagcaacgagcaggcagagctggtaggactggacctgggaagtgctac
agactgtatacagaacgtgcgtacagagacgagatgctcaccaccaacgtacctgagatc
cagagaactaacttggccagcactgtgctttctctcaaggctatgggcatcaatgatctg
ctatcatttgacttcatggacgcccctcctatggagactttaatcacagctatggaacag
ctgtatacgctaggagctctggatgatgagggactgctcactcgtcttggacgcaggatg
gctgagttccctctggagcccatgttgtgtaagatgctcatcatgtctgtccacctgggc
tgcagtgaagagatgctgaccatcgtgtccatgctctctgtgcagaacgttttctacagg
ccgaaggacaaacaggccctggctgaccagaagaaggccaagttccaccagcctgaggga
gaccacctgaccctcctggctgtgtacaactcttggaagaacaacaagttctctaatcct
tggtgctatgaaaactttattcaggcacggtctttgcggcgtgcacaggatatccgtaaa
cagatgctgggcatcatggaccgacacaaattggacgtattctcttgtggcaaggccaca
gttcgagtacagaaggcaatctgcagtggtttcttccgtaacgctgccaagaaagaccct
caagaaggttacagaaccctcattgaccagcaggtggtttacatccacccttccagtgct
ctgtttaaccgccagcctgagtgggtggtgtaccatgaattagtcttgaccaccaaagag
tatatgagggaggtgaccaccattgacccccgctggctggtggagtttgctccagccttc
tttaaagtgtctgatccgactcgcctcagcaaacagaagaaacagcagcgcctggagcct
ctgtacaaccgttacgaggagcccaacgcatggcgaatctccagagctttccgcaggcgg
tag
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integrated database retrieval system
