Astyanax mexicanus (Mexican tetra): 103035818
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Entry
103035818 CDS
T05042
Name
(RefSeq) transmembrane channel-like protein 7 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
103035818
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amex02000
]
103035818
03037 Cilium and associated proteins [BR:
amex03037
]
103035818
Transporters [BR:
amex02000
]
Other transporters
Pores ion channels [TC:
1
]
103035818
Cilium and associated proteins [BR:
amex03037
]
Other cilia and associated proteins
Stereociliary proteins
103035818
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TMC
DUF2721
Motif
Other DBs
NCBI-GeneID:
103035818
NCBI-ProteinID:
XP_049325885
Ensembl:
ENSAMXG00000013015
LinkDB
All DBs
Position
21:complement(42622584..42638075)
Genome browser
AA seq
748 aa
AA seq
DB search
MDTVDGVFYPSHSGAVSNPLLDQLPSYQSLLYRRKSSGTSSTKRRSLNRGRHGSTSSRSG
SGRWASGRLEERPPTLRSTADQRPARELPWSMEEKRRHKEQRLQQCGDLGGWAQWRMSAR
HYLKRMKEDGQDLLSALQLWRADIHMIEGMFGTGIQSYFSFLRFLVLLNFVMFLLMFSFV
MLPIVISTHTSFVNSTFTGGTGSECSVYPPTSRQGLVVFHQHIIDLLSGTGFLEQTYLFY
GYYKVNNIHFPSFSYNLPLAYLLCTITYLLLSLLWIVKRSATGFKRKLVQDEDRFQSFCN
KVFAGWDFCITNENAARLKHSSLLYELKTDLEEERIRQKMAERSRKEKCRIYCLRVALNL
FVIAVLVCCFYCIYSATIFSQQKQAQDQQYYFIVELIFEYLPSIVITLANFITPIIFSII
ISFEDYSPAFEIRFTLMRCVFMRLASIGVLLFSLWSQITSCSNGVCTCGYNHTLYPCWET
HVGQEMYKLMIFDLLIVSSVTVFVEFPRKILVNHCECGLVKWWGQQEFAIPQNVLEIVYG
QTICWIGTFYCPLMPAINTIKYFLVFYIKKVTLVNNCRPASRPFRASSSTFFFLAVLLIG
LALATVPVTVSIAQIRSSDACGPFVNFTTSWEAVPRAVSQLPLGVMTFLNALSSEAFAVS
FFVITCLAMFYVIALAGAHKRVITQLRDQLAMEGRDKRFLIQKLCQAQSELPSRTSRSRA
SHGYHGNPHSSTSGVFVVQPLTHYETQA
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atggacaccgtggacggcgtattctacccgagccacagcggtgcggtcagtaaccccctg
ctggaccagctgcccagctaccagtccctgctgtaccgccgaaagtcctcgggcaccagc
agcacaaaacgccgcagcctcaatcgcgggcgccatggttccaccagcagccgtagcggg
agcgggaggtgggcatccggacggttggaagagagaccacctaccctgcgcagcaccgcc
gaccaaagaccggcccgggaactgccctggagcatggaggagaaacgcaggcacaaggag
cagaggctgcagcagtgtggggacctgggtggctgggctcagtggcggatgagtgctcgg
cactatctgaagagaatgaaagaggacgggcaggatctgctgagcgctctgcagctttgg
agagcagatatccacatgatcgagggtatgtttgggacaggtattcagtcctatttctcc
ttcctgaggtttctggttctgctgaattttgttatgttcttgctgatgttcagctttgtg
atgttgcccatcgtcatctccacccacacctccttcgtcaactccaccttcaccggcggg
acaggaagtgagtgcagtgtgtatcctccaacttctcgacagggactggtggtgtttcac
cagcacatcattgacctgctctctggaacaggattcctggagcagacctatctgttctat
ggttactataaagtgaacaacatccacttcccctcgttcagctacaacctgccgctggcc
tacctgctctgcaccatcacctacctgctgctcagcctgctttggattgtcaagaggtcg
gctacgggctttaagaggaagctggttcaggatgaagatcgttttcagagtttctgtaat
aaggtttttgccggctgggatttctgcattaccaatgagaacgcagctcgcctcaaacac
agcagcctcctctacgagctgaagacagatctggaggaggagcgtatccggcagaagatg
gcagaacgctcccgtaaggagaagtgtcggatctattgtctccgggtggctctgaatctg
tttgttatcgctgtgctggtctgctgcttctactgcatctacagcgccaccatcttctcc
cagcagaaacaggcccaggatcagcagtattattttatagtagagctgatctttgagtat
ctgccctccatcgtcatcactctcgccaacttcatcacccccatcatcttcagcatcatc
atcagcttcgaggactattcccccgccttcgagatccgcttcacactaatgaggtgtgtg
tttatgcggttggctagtatcggagtgctgctgttctctctgtggtctcaaatcacttcc
tgcagtaatggagtgtgtacctgcggatacaaccacaccctctacccctgctgggagacc
cacgttgggcaggagatgtataagctgatgatctttgatctgctgatcgtgagctccgtc
accgtgttcgtggagtttccccgaaagatcctggtgaatcattgtgagtgtgggctggtg
aagtggtggggtcagcaggagttcgccatccctcagaacgttctggagatcgtttatggt
cagaccatctgctggatcgggaccttctactgccccctgatgcccgccattaataccatc
aaatacttcctcgtcttctacatcaaaaaggtgaccctggtgaataactgccgtcctgcg
tcacgcccctttcgagccagtagctccaccttctttttcctggctgtgctgctgattgga
ttagcattagctacagtgcctgtaaccgttagcattgcacagatccgtagttctgatgca
tgtggtccgtttgtgaacttcaccacgtcgtgggaggcggtgccgcgggccgtatcccag
ctgcccctgggggtgatgaccttcctcaatgcgctttcctccgaggccttcgccgtgtcc
ttcttcgtcatcacctgcctggcgatgttttatgtgatagcgttagctggagctcacaaa
cgtgtgatcactcagctgcgagatcagctagccatggagggtcgagataagaggtttctg
atacagaagttgtgtcaggctcagtcggaactcccatctcgcacttcccgctctcgtgct
tcccacggctaccacggcaacccccactccagcacatcgggggtgtttgtggtgcagccg
ctgacccattacgagacccaggcgtga
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