Astyanax mexicanus (Mexican tetra): 103035852
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Entry
103035852 CDS
T05042
Symbol
fgd5a
Name
(RefSeq) FYVE, RhoGEF and PH domain-containing protein 5 isoform X1
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
amex
Astyanax mexicanus (Mexican tetra)
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
amex04990
]
103035852 (fgd5a)
Domain-containing proteins not elsewhere classified [BR:
amex04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
103035852 (fgd5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
RHG20_PH
IQ_SEC7_PH
PH_20
FYVE_2
PH_11
zf-C3HC4_3
Motif
Other DBs
NCBI-GeneID:
103035852
NCBI-ProteinID:
XP_007228777
Ensembl:
ENSAMXG00000015892
UniProt:
A0A8B9JXW3
LinkDB
All DBs
Position
24:complement(25663687..25725148)
Genome browser
AA seq
1561 aa
AA seq
DB search
MDQDYQKRLPTPRPKVQSRLTITVRSTLMSRTCTSSRGPKPPVAPKPRLSTEQEDDHNQN
IISNGDLVPSESESEATVDEADTPVRNSVGDLSEESCNIAEEHVEAELNTHDGISDNDVE
EDLEMGAGETDEIAESEKEEQEEVENGSDVDDAGSLNDVQEVILNTVSAAVYHIKGTGDV
FPPQGTGDPNDTADDPAEYPEKETLAEDQTGVEMEVNKDKASPYEEIEELTSNQGSAYAE
IDNVEEPADDTEEPYFNERESFLCEPPTERDDEPREEGTNPSTEFSLSRAVEDKTKAEAV
FSSQTMNGSQASLCEEYPYDVIGSLDDTNSWQPERATKDTSGRFRFSEEEDDAFEPYSVI
EVVPADLTCTSDPEADHTEEDCADKKGKDSETETAGTSNPEPFYVSSDDVAELEKEQMGG
TDCVPSTSETSEQQDKEVDEYADIDDSLCRDEDDQQLECASSEDYVEIGDEDEPVDVERN
KTRGKSARERSARRSQAYDSQRNSCQPRLRLCNITVPADLDLGRTPELTNRVVFAHTTEA
FEEDIEDLDCHIVPFFEDSDSDSDEHIYEEAGFDSEGENFISLDRKTIVTRSRSLSGKVP
GYVPETVPEETGNESQSHDYYTVTLDQNGDLLTSSDNSEDKIKQMIPSLKHRRFLAYPRS
YSVEGRDMDGLSSRFGSDHSPQVENKVKRKEDTLSLPCVITSSGSFSQRSHQSSSGVSTP
TSLVDIPPPFELAYITKRPVTKSSPSLLIQHESNDKPKKKKTSFKRFLALKFRKKTDNKG
HGDGSVRSSRSSSESSYHGPVRVIELDRRSTGSSPQLQSRIVKSQRNSDFPATFVVYKDK
RKGVPKAYGNRGISRVESFEERSRPPFMPLPLTKPRSISFPSADTSDYENIPAMSSDYEN
IQIPPGRPTRAVTITEFFEEHNRTTAPSNENDGYVDMNSFAGIESRTNAQEQEAESAYTE
PFPVCQAPASHSADEDHGRTSEEEEGCGDISFDRQIDGRSRAYYVAKELLDSEKEHLKTL
KLLHEDFQSAVDEAVGDDGKPVLEEGRLGEILSTLPQAYQLHTHIFTELDTRIKQWEDSP
RVVEVFLTSREEFGVFTTYIKEYDRNMALLEESCRRSQAFADIVKRFEQQNAEGVQIPVK
HQLLQVIVRVLQYRMLLTDYLNNLSPDSREYEDTQAALVIVSEIADQANDSLKDGENLLR
LVHIEYSVKGKRALLQPGRVFVKEGTLMKVSRKSRQPRHLFLTNDMMLYTYPQQDGKYRL
KNTLPLSGMKVSKSVIDNVLNTLRIEVNDVTITLSASSLAEREDWFHTLSRAIADHAAGL
NTFSSSSESREKLWMSLGEAAPVLVPISHAMMCMNCASDFSLTLRKHHCNACGKVVCRAC
SRNRYPLKYLKDRAVKVCNRCFAELKKRGGNVPMQCSSASPHTNRASRPLSAVFQSLQPP
SLWKSRKSTSSPLAQVSVGAEGSTISGSLQRRKKSKRKWKRLWFLLKDKVLYTFTAREDK
VASETLPLQGFTVKLSDQSEGEDTDGVFQLYHKKTLYYTFRADDLHTARRWVNAMEEATV
L
NT seq
4686 nt
NT seq
+upstream
nt +downstream
nt
atggatcaggattatcagaaacgactgccgactcctcgacccaaggtccaaagtcgtctg
accataacagtgcgctccaccctcatgtcaagaacttgtacgtcttcccgaggtccaaaa
cctcctgtcgccccaaaaccgaggctatctaccgagcaagaggacgaccacaaccaaaac
atcattagcaatggagacctagtgccttctgaatccgaatcagaggctacggtggatgaa
gctgacacgcctgtaaggaactctgtgggagatctttctgaggagtcgtgtaacatcgca
gaggaacatgtagaggcagaactcaatacacatgatggtatttctgataacgacgtggag
gaagacttagaaatgggggcaggagaaacagatgagatagcagagtctgagaaggaggag
caggaggaggtggagaatggcagtgacgtagatgatgcaggctccttgaatgacgtccaa
gaagttattctaaatactgtttcagctgctgtataccacatcaaaggcactggtgatgtg
ttcccacctcagggcacaggtgatcctaatgatacagcagatgaccctgctgaatatcct
gagaaagagactcttgcagaggatcaaacaggagttgaaatggaggtcaataaggataaa
gcaagcccttacgaagaaatcgaggaattaacgtcaaaccagggcagcgcatatgccgaa
atagacaatgtagaagagcctgctgatgatacagaggagccttatttcaatgagagagag
tcctttctctgcgagcctccaacggagcgtgacgatgagccaagggaagagggcacaaat
ccaagtacagagttttcacttagcagggcggttgaggacaagacaaaagcagaggctgtt
ttttcctcacagactatgaatggcagccaggcctccctgtgcgaggaatacccatatgat
gtcatcggatcgctggatgacaccaattcgtggcagccagaacgtgccaccaaagacaca
tcaggacggttcagattctcagaggaagaagacgatgcgtttgaaccatactcggtcata
gaggttgtgcccgctgatctcacatgcacctcagacccagaggcagatcacacagaagag
gattgtgccgataagaaaggtaaggacagtgagacagagacggctggcacttccaaccca
gagcctttttacgtctcatcagatgatgtggcagaactagagaaagaacagatgggagga
actgattgtgtcccgtcaacctctgaaacctcagagcagcaggacaaggaagtggacgag
tatgcggacatcgatgactctctgtgccgggatgaagacgatcagcaattggaatgcgca
tcatccgaggattatgtggagataggcgatgaagatgagcctgtggatgtggagcgtaat
aaaactagaggcaagagtgcaagggagcgctcagccaggcgtagccaggcctacgatagc
cagagaaacagctgccaaccacgccttagactttgtaacattacagtgccagctgacctt
gacctgggcaggactcctgagctaacgaaccgtgtggtattcgcccacaccacagaggca
ttcgaggaggacatagaagaccttgactgccatatagtgcctttctttgaggattcagac
tcagacagtgatgaacacatttatgaggaggcaggttttgactcggaaggggaaaacttt
atctcactggacaggaaaaccattgtgacccgctcacgttcactctctgggaaagtaccc
ggatatgtccctgagactgttcctgaggagacaggcaacgaatcccagagtcacgactac
tacacagtgaccctggaccaaaatggagatctattaacgtcttcagataactctgaagat
aagatcaaacagatgattccctcgttgaagcacaggcgatttcttgcctatccacgttca
tattctgtggagggtcgagacatggatggcttgtcttcccgttttggaagtgatcactca
cctcaagttgagaacaaagtgaaaaggaaagaagacactctctcgctgccgtgcgttatt
acctcttccggaagcttttcgcaaagaagtcaccagtcttccagtggtgtttcaacacct
acgtctctcgtggacattccaccaccctttgaactggcatacatcaccaagaggcctgtc
actaagagctcgccatctcttcttattcaacacgagtccaatgataagccaaaaaagaag
aagacatcattcaagcgttttctggctctaaagttcagaaagaaaactgataacaaaggg
catggagatggcagcgtccgttcctccagatcatcatcagaatctagctatcatgggcca
gttcgagttatagagctggaccggagaagtaccggcagctccccacagcttcaatcacga
attgttaaatctcaacgcaactcagactttcccgccacttttgtggtgtacaaggacaag
aggaaaggcgtccccaaagcatacggcaacagaggcatctccagagtggagtcttttgag
gagcgctctcgtcctccgttcatgccactcccactcaccaaacctcgctccatctccttt
ccaagtgccgatacatcagactacgaaaacattccagctatgagttccgactacgagaat
attcagatccctccaggaaggcccactcgggcagttaccatcacagaattttttgaggaa
cacaatcgcacgacagcaccttcaaatgagaacgatggctacgtggacatgaacagcttt
gcaggaatagagagcaggactaacgcacaagagcaggaagctgagagtgcctacacagag
cctttccctgtgtgccaggctcctgcatctcactccgctgatgaagaccacggacgaaca
tctgaagaggaagaaggttgtggtgatatctcctttgacagacagattgatggcagatcc
agagcctactacgtagccaaagagctgctggattctgagaaagagcatctgaagacactg
aaactacttcatgaggacttccagtcagcggtggatgaagcggtaggggacgatggcaag
cccgtgctggaggagggcaggctgggagagatcctcagcacgctgcctcaggcttaccag
ctccacacacacatcttcactgaactggacaccaggatcaaacagtgggaggacagcccg
agggtggtggaggtctttctgacgagccgggaggagtttggggtcttcacgacctacatc
aaagaatacgaccgcaacatggctctgctggaggagagttgcaggcggagccaagccttc
gccgatatcgtcaagcgctttgagcagcagaatgcggagggtgtgcagattcctgtgaaa
caccagctgctgcaggtcatcgtgcgagtgctccagtatcgcatgctgctcacagattac
ttgaacaacctttcccccgactccagagagtatgaagacacacaggctgcgctggtgatc
gtgtctgagatcgccgaccaggccaacgacagcctaaaggacggggagaatctgctgcgt
ctggttcatattgagtacagtgtgaaggggaagagggctctgctgcagccgggacgagtg
tttgtaaaagagggcacattgatgaaggtctctcgtaagagccggcagcctcgacacctg
ttcctgacgaatgacatgatgctgtacacctaccctcagcaggatggaaagtacaggctg
aagaatactcttcctctcagtggcatgaaggtcagcaaatccgtcattgacaatgtgctc
aacacactcaggatagaagtcaatgatgtgactattaccctctcagcaagttctctggct
gagagagaggactggtttcacactctgagcagagctatagctgaccacgctgccggcctc
aatacattcagctcctccagtgagtcgagggagaagttgtggatgtctctgggggaagcg
gctccagtgctggtgcccatctcccacgccatgatgtgcatgaactgtgcctcagacttc
agcctgacgctgcgcaaacaccactgcaatgcatgtggcaaggtggtgtgcagagcctgc
tccagaaacaggtacccgctgaaatatctgaaggacagagcggtgaaggtgtgcaaccgc
tgctttgctgagctcaagaaacgaggagggaatgtgcccatgcagtgcagcagtgcaagt
ccacacactaacagagccagcaggcctctgtccgctgtgttccagagcctgcagcctccc
agcctgtggaagagccggaaaagcacttcttcacctctcgctcaggtgtccgtgggcgct
gaaggctccactataagtgggagtctgcagaggaggaagaagagtaagcggaagtggaag
aggctgtggtttctgctcaaagacaaggtgctctacacctttacagccagagaggataag
gtggcgagtgagactctgcctctgcagggttttacagtaaagctgtctgatcagtctgag
ggagaggacacagacggcgttttccagctttaccataaaaaaaccctctactacacattc
agagcggacgatctacacactgcacgcagatgggtgaatgcaatggaggaagctacagta
ttatag
DBGET
integrated database retrieval system
