Astyanax mexicanus (Mexican tetra): 103035919
Help
Entry
103035919 CDS
T05042
Symbol
xrcc4
Name
(RefSeq) DNA repair protein XRCC4 isoform X1
KO
K10886
DNA-repair protein XRCC4
Organism
amex
Astyanax mexicanus (Mexican tetra)
Pathway
amex03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
amex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
103035919 (xrcc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amex03400
]
103035919 (xrcc4)
DNA repair and recombination proteins [BR:
amex03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
103035919 (xrcc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XRCC4
XRCC4_CC
XRCC4_C
XLF
Leu_zip
Phage_GPO
Exonuc_VII_L
BMFP
SKA2
Motif
Other DBs
NCBI-GeneID:
103035919
NCBI-ProteinID:
XP_022520313
Ensembl:
ENSAMXG00000031991
LinkDB
All DBs
Position
20:72747..87304
Genome browser
AA seq
370 aa
AA seq
DB search
MKVTVRQISVDSKPESRLFLKLEWDRDLGAGFVVVLCDGVSAWSGEVSEEDVTREAREME
MERKRYVQDLQLVLTGENQTTQNYRFCLTPERPGTPVLQLSYEKMENDISFRLGMVDLLP
VPESTEVIRELISFGLQRNASLKTKNQNLLEENRRIRDELEHITAQMEGCVREKEEVERD
LFSRFVLVLNEKKNKLRDLQQRIKQLEVTVEEEKQRYTARQSSTVTNHNRPSQNPHIYFL
KLFSSFRRKRGVAGDEREQAVKLGGESDYGSTTDEEQQEDPENSALKTPDQEALPGNPMN
DSLHDITDVAPSRKRRQRHLQQPPTQSKRPALEPSQNSRAELTKGHKGEVLAGVGAPVVS
PNPDDLFEDI
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atgaaggttactgtgcgtcagatttctgttgactctaaacctgagagcaggttgttcctg
aagctggagtgggaccgggacctgggagcggggttcgtggtggtgctgtgtgatggtgtc
tcggcgtggagtggtgaagtgtcggaggaggatgtgacgagggaggcgagggagatggag
atggagaggaagaggtatgttcaggacctgcagctggttctgaccggggagaaccagacg
acccagaactacagattctgtcttacacccgagagacccggcacccctgtgctccagctg
tcctacgagaaaatggagaatgatatttcattcaggcttggcatggtggacctgctgcct
gtacccgagtccactgaggtcatcagggagctcatcagcttcgggcttcagaggaacgca
tctctgaagaccaagaaccagaacctgctggaagagaaccggagaataagagacgagctg
gagcacatcacagcgcagatggagggatgtgttcgggagaaggaggaggtggagagggat
ctgttcagccgttttgttctggttctaaacgagaagaagaataaactcagagatttacag
cagaggatcaaacagctggaagtgactgtagaggaggagaagcagaggtacacagcccgt
caatcatctactgtaaccaatcacaatcgtccatcacagaacccacatatctacttctta
aagctgttttcttctttcagaaggaaacgaggagtggctggtgatgaaagagagcaggct
gtgaaactgggaggagagagtgattatgggagcacgacagacgaggaacagcaggaggat
ccagaaaactctgccctgaaaactccagatcaagaagcgttgccgggtaacccaatgaat
gacagcctacatgacatcacagacgtggcacccagccgcaaacggcgacagcggcacctc
caacaaccgccgacccaaagcaagagacccgctctggagccgagccagaactcacgagct
gagttgactaaaggacataaaggggaagtgctggctggtgttggggcgccggtggtctct
ccgaatccagacgatctgtttgaggatatctga
DBGET
integrated database retrieval system
